RNA–Protein interactions for RNA: ENST00000481116.5

ABCF3-215, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-215ENST00000481116 PDE4AP27815 886 aa15.37■□□□□ 0.05
ABCF3-215ENST00000481116 NMIQ13287 307 aaPredicted RBP15.37■□□□□ 0.05
ABCF3-215ENST00000481116 GPRC5AQ8NFJ5 357 aa15.37■□□□□ 0.05
ABCF3-215ENST00000481116 COA7Q96BR5 231 aa15.37■□□□□ 0.05
ABCF3-215ENST00000481116 NAPBQ9H115 298 aa15.37■□□□□ 0.05
ABCF3-215ENST00000481116 OSBPL3Q9H4L5 887 aa15.37■□□□□ 0.05
ABCF3-215ENST00000481116 ARHGEF10LQ9HCE6 1279 aa15.37■□□□□ 0.05
ABCF3-215ENST00000481116 A0A0G2JMZ2 1700 aa15.37■□□□□ 0.05
ABCF3-215ENST00000481116 ZNFX1Q9P2E3 1918 aaKnown RBP15.37■□□□□ 0.05
ABCF3-215ENST00000481116 ADCY3O60266 1144 aa15.36■□□□□ 0.05
ABCF3-215ENST00000481116 ERVK-9P63128 1117 aa15.36■□□□□ 0.05
ABCF3-215ENST00000481116 ERVK-24P63145 666 aa15.36■□□□□ 0.05
ABCF3-215ENST00000481116 CTDSPL2Q05D32 466 aa15.36■□□□□ 0.05
ABCF3-215ENST00000481116 PPARAQ07869 468 aa15.36■□□□□ 0.05
ABCF3-215ENST00000481116 ZNF589Q86UQ0 364 aaPredicted RBP15.36■□□□□ 0.05
ABCF3-215ENST00000481116 NACAP1Q9BZK3 213 aa15.36■□□□□ 0.05
ABCF3-215ENST00000481116 TANGO6Q9C0B7 1094 aa15.36■□□□□ 0.05
ABCF3-215ENST00000481116 PORCNQ9H237 461 aa15.36■□□□□ 0.05
ABCF3-215ENST00000481116 INCENPQ9NQS7 918 aa15.36■□□□□ 0.05
ABCF3-215ENST00000481116 HELLSQ9NRZ9 838 aa15.36■□□□□ 0.05
ABCF3-215ENST00000481116 BTBD7Q9P203 1132 aa15.36■□□□□ 0.05
ABCF3-215ENST00000481116 BIN2Q9UBW5 565 aaPredicted RBP15.36■□□□□ 0.05
ABCF3-215ENST00000481116 TMX2Q9Y320 296 aa15.36■□□□□ 0.05
ABCF3-215ENST00000481116 SPDYE16A6NNV3 312 aaPredicted RBP15.35■□□□□ 0.05
ABCF3-215ENST00000481116 RAD21O60216 631 aa15.35■□□□□ 0.05
ABCF3-215ENST00000481116 MCMDC2Q4G0Z9 681 aa15.35■□□□□ 0.05
ABCF3-215ENST00000481116 SAMD1Q6SPF0 538 aaPredicted RBP15.35■□□□□ 0.05
ABCF3-215ENST00000481116 TMEM106CQ9BVX2 250 aa15.35■□□□□ 0.05
ABCF3-215ENST00000481116 VCPKMTQ9H867 229 aa15.35■□□□□ 0.05
ABCF3-215ENST00000481116 KANSL2Q9H9L4 492 aa15.35■□□□□ 0.05
ABCF3-215ENST00000481116 GJD2Q9UKL4 321 aa15.35■□□□□ 0.05
ABCF3-215ENST00000481116 TACC3Q9Y6A5 838 aa15.35■□□□□ 0.05
ABCF3-215ENST00000481116 SDSP20132 328 aa15.34■□□□□ 0.05
ABCF3-215ENST00000481116 FAM47AQ5JRC9 791 aa15.34■□□□□ 0.05
ABCF3-215ENST00000481116 ZNF444Q8N0Y2 327 aaPredicted RBP15.34■□□□□ 0.05
ABCF3-215ENST00000481116 RABGAP1Q9Y3P9 1069 aa15.34■□□□□ 0.05
ABCF3-215ENST00000481116 COG2Q14746 738 aa15.33■□□□□ 0.04
ABCF3-215ENST00000481116 SLAIN1Q8ND83 568 aa15.33■□□□□ 0.04
ABCF3-215ENST00000481116 GTF3C2Q8WUA4 911 aaPredicted RBP15.33■□□□□ 0.04
ABCF3-215ENST00000481116 SH2D4AQ9H788 454 aa15.33■□□□□ 0.04
ABCF3-215ENST00000481116 CLIP2Q9UDT6 1046 aa15.33■□□□□ 0.04
ABCF3-215ENST00000481116 IGKV6D-41A0A0C4DH26 115 aa15.32■□□□□ 0.04
ABCF3-215ENST00000481116 FLOT1O75955 427 aa15.32■□□□□ 0.04
ABCF3-215ENST00000481116 INHAP05111 366 aa15.32■□□□□ 0.04
ABCF3-215ENST00000481116 HSPD1P10809 573 aaKnown RBP15.32■□□□□ 0.04
ABCF3-215ENST00000481116 CCL5P13501 91 aa15.32■□□□□ 0.04
ABCF3-215ENST00000481116 CYP2B6P20813 491 aa15.32■□□□□ 0.04
ABCF3-215ENST00000481116 PDE4BQ07343 736 aa15.32■□□□□ 0.04
ABCF3-215ENST00000481116 IRF5Q13568 498 aa15.32■□□□□ 0.04
ABCF3-215ENST00000481116 LBX2Q6XYB7 198 aa15.32■□□□□ 0.04
ABCF3-215ENST00000481116 GPR142Q7Z601 462 aa15.32■□□□□ 0.04
ABCF3-215ENST00000481116 CCAR1Q8IX12 1150 aaKnown RBP15.32■□□□□ 0.04
ABCF3-215ENST00000481116 LPAR1Q92633 364 aa15.32■□□□□ 0.04
ABCF3-215ENST00000481116 ATG4CQ96DT6 458 aa15.32■□□□□ 0.04
ABCF3-215ENST00000481116 CEP95Q96GE4 821 aa15.32■□□□□ 0.04
ABCF3-215ENST00000481116 NUP88Q99567 741 aaPredicted RBP15.32■□□□□ 0.04
ABCF3-215ENST00000481116 UNC93B1Q9H1C4 597 aa15.32■□□□□ 0.04
ABCF3-215ENST00000481116 FBXO28Q9NVF7 368 aa15.32■□□□□ 0.04
ABCF3-215ENST00000481116 LAMA4Q16363 1823 aa15.31■□□□□ 0.04
ABCF3-215ENST00000481116 WDR46O15213 610 aaKnown RBP15.31■□□□□ 0.04
ABCF3-215ENST00000481116 FGAP02671 866 aa15.31■□□□□ 0.04
ABCF3-215ENST00000481116 TSPY3P0CV98 308 aa15.31■□□□□ 0.04
ABCF3-215ENST00000481116 TSPY8P0CW00 308 aa15.31■□□□□ 0.04
ABCF3-215ENST00000481116 MAPK4P31152 587 aa15.31■□□□□ 0.04
ABCF3-215ENST00000481116 DSG3P32926 999 aa15.31■□□□□ 0.04
ABCF3-215ENST00000481116 UBXN2AP68543 259 aa15.31■□□□□ 0.04
ABCF3-215ENST00000481116 TFAP4Q01664 338 aa15.31■□□□□ 0.04
ABCF3-215ENST00000481116 TRIM32Q13049 653 aa15.31■□□□□ 0.04
ABCF3-215ENST00000481116 FAM83BQ5T0W9 1011 aa15.31■□□□□ 0.04
ABCF3-215ENST00000481116 WDR78Q5VTH9 848 aa15.31■□□□□ 0.04
ABCF3-215ENST00000481116 CWC27Q6UX04 472 aaKnown RBP15.31■□□□□ 0.04
ABCF3-215ENST00000481116 PLEKHH3Q7Z736 793 aa15.31■□□□□ 0.04
ABCF3-215ENST00000481116 PXYLP1Q8TE99 480 aa15.31■□□□□ 0.04
ABCF3-215ENST00000481116 RNF208Q9H0X6 261 aa15.31■□□□□ 0.04
ABCF3-215ENST00000481116 ZNF287Q9HBT7 754 aa15.31■□□□□ 0.04
ABCF3-215ENST00000481116 GOPCQ9HD26 462 aa15.31■□□□□ 0.04
ABCF3-215ENST00000481116 HOXC10Q9NYD6 342 aa15.31■□□□□ 0.04
ABCF3-215ENST00000481116 NYAP2Q9P242 653 aa15.31■□□□□ 0.04
ABCF3-215ENST00000481116 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.31■□□□□ 0.04
ABCF3-215ENST00000481116 CCDC171Q6TFL3 1326 aa15.31■□□□□ 0.04
ABCF3-215ENST00000481116 SLC3A2P08195 630 aaKnown RBP15.3■□□□□ 0.04
ABCF3-215ENST00000481116 GSPT1P15170 499 aaKnown RBP15.3■□□□□ 0.04
ABCF3-215ENST00000481116 HAND2P61296 217 aa15.3■□□□□ 0.04
ABCF3-215ENST00000481116 ALX1Q15699 326 aa15.3■□□□□ 0.04
ABCF3-215ENST00000481116 NEDD1Q8NHV4 660 aa15.3■□□□□ 0.04
ABCF3-215ENST00000481116 CHMP4CQ96CF2 233 aa15.3■□□□□ 0.04
ABCF3-215ENST00000481116 NUDT12Q9BQG2 462 aa15.3■□□□□ 0.04
ABCF3-215ENST00000481116 CWC22Q9HCG8 908 aaKnown RBP15.3■□□□□ 0.04
ABCF3-215ENST00000481116 MTMR4Q9NYA4 1195 aa15.3■□□□□ 0.04
ABCF3-215ENST00000481116 PLXNA1Q9UIW2 1896 aa15.29■□□□□ 0.04
ABCF3-215ENST00000481116 MKI67P46013 3256 aaKnown RBP15.29■□□□□ 0.04
ABCF3-215ENST00000481116 F5H6K3 240 aa15.29■□□□□ 0.04
ABCF3-215ENST00000481116 NMT2O60551 498 aa15.29■□□□□ 0.04
ABCF3-215ENST00000481116 CCNA1P78396 465 aa15.29■□□□□ 0.04
ABCF3-215ENST00000481116 KLRC3Q07444 240 aa15.29■□□□□ 0.04
ABCF3-215ENST00000481116 PLS1Q14651 629 aa15.29■□□□□ 0.04
ABCF3-215ENST00000481116 CCL14Q16627 93 aa15.29■□□□□ 0.04
ABCF3-215ENST00000481116 MORN1Q5T089 497 aa15.29■□□□□ 0.04
ABCF3-215ENST00000481116 TTC22Q5TAA0 569 aa15.29■□□□□ 0.04
ABCF3-215ENST00000481116 TICAM2Q86XR7 235 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms