RNA–Protein interactions for RNA: ENST00000481057.1

CBX3-206, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-206ENST00000481057 MTUS2Q5JR59 1369 aa9.9□□□□□ -0.82
CBX3-206ENST00000481057 PLCH1Q4KWH8 1693 aa9.9□□□□□ -0.82
CBX3-206ENST00000481057 ZNF644Q9H582 1327 aaPredicted RBP9.9□□□□□ -0.82
CBX3-206ENST00000481057 PTPN11Q06124 597 aaPredicted RBP9.9□□□□□ -0.82
CBX3-206ENST00000481057 SOX4Q06945 474 aaPredicted RBP9.9□□□□□ -0.82
CBX3-206ENST00000481057 SEPT6Q14141 434 aa9.9□□□□□ -0.82
CBX3-206ENST00000481057 UVSSAQ2YD98 709 aa9.9□□□□□ -0.82
CBX3-206ENST00000481057 C12orf50Q8NA57 414 aaPredicted RBP9.9□□□□□ -0.82
CBX3-206ENST00000481057 SPOCK3Q9BQ16 436 aa9.9□□□□□ -0.82
CBX3-206ENST00000481057 ZFYVE9O95405 1425 aa9.9□□□□□ -0.83
CBX3-206ENST00000481057 PDE4DIPQ5VU43 2346 aa9.89□□□□□ -0.83
CBX3-206ENST00000481057 NPHP3Q7Z494 1330 aa9.89□□□□□ -0.83
CBX3-206ENST00000481057 NEXMIFQ5QGS0 1516 aa9.89□□□□□ -0.83
CBX3-206ENST00000481057 EHBP1L1Q8N3D4 1523 aa9.89□□□□□ -0.83
CBX3-206ENST00000481057 TMPRSS2O15393 492 aa9.89□□□□□ -0.83
CBX3-206ENST00000481057 DRD2P14416 443 aa9.89□□□□□ -0.83
CBX3-206ENST00000481057 TCF3P15923 654 aa9.89□□□□□ -0.83
CBX3-206ENST00000481057 LMNB2Q03252 620 aa9.89□□□□□ -0.83
CBX3-206ENST00000481057 TRIM42Q8IWZ5 723 aa9.89□□□□□ -0.83
CBX3-206ENST00000481057 C2CD4AQ8NCU7 369 aaPredicted RBP9.89□□□□□ -0.83
CBX3-206ENST00000481057 MIR1-1HGQ9H1L0 117 aa9.89□□□□□ -0.83
CBX3-206ENST00000481057 PPP1R9AQ9ULJ8 1098 aa9.89□□□□□ -0.83
CBX3-206ENST00000481057 LRRIQ1Q96JM4 1722 aa9.89□□□□□ -0.83
CBX3-206ENST00000481057 SART1O43290 800 aaKnown RBP9.88□□□□□ -0.83
CBX3-206ENST00000481057 PF4P02776 101 aa9.88□□□□□ -0.83
CBX3-206ENST00000481057 SLFN14P0C7P3 912 aa9.88□□□□□ -0.83
CBX3-206ENST00000481057 CAMK2GQ13555 558 aaPredicted RBP9.88□□□□□ -0.83
CBX3-206ENST00000481057 GPAT2Q6NUI2 795 aa9.88□□□□□ -0.83
CBX3-206ENST00000481057 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.88□□□□□ -0.83
CBX3-206ENST00000481057 NLGN2Q8NFZ4 835 aa9.88□□□□□ -0.83
CBX3-206ENST00000481057 AP4E1Q9UPM8 1137 aa9.88□□□□□ -0.83
CBX3-206ENST00000481057 THSD7AQ9UPZ6 1657 aa9.87□□□□□ -0.83
CBX3-206ENST00000481057 PXDNQ92626 1479 aa9.87□□□□□ -0.83
CBX3-206ENST00000481057 CCDC85CA6NKD9 419 aa9.87□□□□□ -0.83
CBX3-206ENST00000481057 MINDY4BA8MYZ0 360 aa9.87□□□□□ -0.83
CBX3-206ENST00000481057 MSTNO14793 375 aa9.87□□□□□ -0.83
CBX3-206ENST00000481057 GARTP22102 1010 aa9.87□□□□□ -0.83
CBX3-206ENST00000481057 ID3Q02535 119 aa9.87□□□□□ -0.83
CBX3-206ENST00000481057 ZC3H12AQ5D1E8 599 aaKnown RBP9.87□□□□□ -0.83
CBX3-206ENST00000481057 USP48Q86UV5 1035 aa9.87□□□□□ -0.83
CBX3-206ENST00000481057 ARMC10Q8N2F6 343 aa9.87□□□□□ -0.83
CBX3-206ENST00000481057 GSX1Q9H4S2 264 aaPredicted RBP9.87□□□□□ -0.83
CBX3-206ENST00000481057 PRDM10Q9NQV6 1147 aa9.87□□□□□ -0.83
CBX3-206ENST00000481057 TPSG1Q9NRR2 321 aa9.87□□□□□ -0.83
CBX3-206ENST00000481057 IGSF5Q9NSI5 407 aa9.87□□□□□ -0.83
CBX3-206ENST00000481057 CRIM1Q9NZV1 1036 aa9.87□□□□□ -0.83
CBX3-206ENST00000481057 PCDHA4Q9UN74 947 aa9.87□□□□□ -0.83
CBX3-206ENST00000481057 ACTL7BQ9Y614 415 aa9.87□□□□□ -0.83
CBX3-206ENST00000481057 RIMS2Q9UQ26 1411 aa9.87□□□□□ -0.83
CBX3-206ENST00000481057 PTPN23Q9H3S7 1636 aa9.86□□□□□ -0.83
CBX3-206ENST00000481057 GAS2O43903 313 aaKnown RBP9.86□□□□□ -0.83
CBX3-206ENST00000481057 FAM160A1Q05DH4 1040 aa9.86□□□□□ -0.83
CBX3-206ENST00000481057 ZNF394Q53GI3 561 aa9.86□□□□□ -0.83
CBX3-206ENST00000481057 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.86□□□□□ -0.83
CBX3-206ENST00000481057 CCDC84Q86UT8 332 aaPredicted RBP9.86□□□□□ -0.83
CBX3-206ENST00000481057 UTP4Q969X6 686 aaKnown RBP9.86□□□□□ -0.83
CBX3-206ENST00000481057 MYRFLQ96LU7 910 aa9.86□□□□□ -0.83
CBX3-206ENST00000481057 KCNQ5Q9NR82 932 aa9.86□□□□□ -0.83
CBX3-206ENST00000481057 PCDHGB7Q9Y5F8 929 aa9.86□□□□□ -0.83
CBX3-206ENST00000481057 ADGRL2O95490 1459 aa9.85□□□□□ -0.83
CBX3-206ENST00000481057 FYCO1Q9BQS8 1478 aa9.85□□□□□ -0.83
CBX3-206ENST00000481057 IGHA1P01876 353 aa9.85□□□□□ -0.83
CBX3-206ENST00000481057 SNAP47Q5SQN1 464 aa9.85□□□□□ -0.83
CBX3-206ENST00000481057 C9orf131Q5VYM1 1079 aa9.85□□□□□ -0.83
CBX3-206ENST00000481057 BNC2Q6ZN30 1099 aaPredicted RBP9.85□□□□□ -0.83
CBX3-206ENST00000481057 NT5DC4Q86YG4 428 aa9.85□□□□□ -0.83
CBX3-206ENST00000481057 TP53INP1Q96A56 240 aa9.85□□□□□ -0.83
CBX3-206ENST00000481057 ADAMTS1Q9UHI8 967 aa9.85□□□□□ -0.83
CBX3-206ENST00000481057 HIF3AQ9Y2N7 669 aa9.85□□□□□ -0.83
CBX3-206ENST00000481057 SPATA31A5Q5VU36 1347 aa9.84□□□□□ -0.83
CBX3-206ENST00000481057 SPATA31A7Q8IWB4 1347 aa9.84□□□□□ -0.83
CBX3-206ENST00000481057 PLSCR1O15162 318 aa9.84□□□□□ -0.83
CBX3-206ENST00000481057 TNRC18O15417 2968 aaPredicted RBP9.84□□□□□ -0.83
CBX3-206ENST00000481057 EIF4A3P38919 411 aaKnown RBP9.84□□□□□ -0.83
CBX3-206ENST00000481057 ERVK-24P63145 666 aa9.84□□□□□ -0.83
CBX3-206ENST00000481057 LRFN4Q6PJG9 635 aa9.84□□□□□ -0.83
CBX3-206ENST00000481057 DYMQ7RTS9 669 aa9.84□□□□□ -0.83
CBX3-206ENST00000481057 JARID2Q92833 1246 aaPredicted RBP9.84□□□□□ -0.83
CBX3-206ENST00000481057 FANCD2OSQ96PS1 177 aa9.84□□□□□ -0.83
CBX3-206ENST00000481057 ATXN3LQ9H3M9 355 aa9.84□□□□□ -0.83
CBX3-206ENST00000481057 STK32BQ9NY57 414 aa9.84□□□□□ -0.83
CBX3-206ENST00000481057 DDX41Q9UJV9 622 aaKnown RBP9.84□□□□□ -0.83
CBX3-206ENST00000481057 NALCNQ8IZF0 1738 aa9.83□□□□□ -0.84
CBX3-206ENST00000481057 DCDC2CA8MYV0 355 aa9.83□□□□□ -0.84
CBX3-206ENST00000481057 F13A1P00488 732 aa9.83□□□□□ -0.84
CBX3-206ENST00000481057 DOC2BQ14184 412 aa9.83□□□□□ -0.84
CBX3-206ENST00000481057 INPP5AQ14642 412 aa9.83□□□□□ -0.84
CBX3-206ENST00000481057 SLC15A2Q16348 729 aa9.83□□□□□ -0.84
CBX3-206ENST00000481057 WIPI1Q5MNZ9 446 aaPredicted RBP9.83□□□□□ -0.84
CBX3-206ENST00000481057 FBXL19Q6PCT2 694 aa9.83□□□□□ -0.84
CBX3-206ENST00000481057 GOLM1Q8NBJ4 401 aa9.83□□□□□ -0.84
CBX3-206ENST00000481057 PLPPR2Q96GM1 343 aa9.83□□□□□ -0.84
CBX3-206ENST00000481057 DISC1Q9NRI5 854 aa9.83□□□□□ -0.84
CBX3-206ENST00000481057 FAM105AQ9NUU6 356 aa9.83□□□□□ -0.84
CBX3-206ENST00000481057 BTG4Q9NY30 223 aa9.83□□□□□ -0.84
CBX3-206ENST00000481057 FAM221AA4D161 298 aa9.82□□□□□ -0.84
CBX3-206ENST00000481057 FOXN1O15353 648 aa9.82□□□□□ -0.84
CBX3-206ENST00000481057 BMP3P12645 472 aa9.82□□□□□ -0.84
CBX3-206ENST00000481057 CDK8P49336 464 aa9.82□□□□□ -0.84
CBX3-206ENST00000481057 RACK1P63244 317 aaKnown RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms