RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 PTPDC1A2A3K4 754 aa20.48■□□□□ 0.87
UPF3A-206ENST00000480362 PPFIA3O75145 1194 aa20.48■□□□□ 0.87
UPF3A-206ENST00000480362 KIF5BP33176 963 aa20.48■□□□□ 0.87
UPF3A-206ENST00000480362 GRM4Q14833 912 aa20.48■□□□□ 0.87
UPF3A-206ENST00000480362 NTRK3Q16288 839 aa20.48■□□□□ 0.87
UPF3A-206ENST00000480362 MAP1SQ66K74 1059 aaPredicted RBP20.48■□□□□ 0.87
UPF3A-206ENST00000480362 KLRG1Q96E93 195 aa20.48■□□□□ 0.87
UPF3A-206ENST00000480362 DDX11Q96FC9 970 aa20.48■□□□□ 0.87
UPF3A-206ENST00000480362 WRNIP1Q96S55 665 aa20.48■□□□□ 0.87
UPF3A-206ENST00000480362 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.48■□□□□ 0.87
UPF3A-206ENST00000480362 CDKL5O76039 1030 aa20.47■□□□□ 0.87
UPF3A-206ENST00000480362 NF2P35240 595 aa20.47■□□□□ 0.87
UPF3A-206ENST00000480362 HMGN5P82970 282 aaKnown RBP20.47■□□□□ 0.87
UPF3A-206ENST00000480362 LDHDQ86WU2 507 aa20.47■□□□□ 0.87
UPF3A-206ENST00000480362 ARHGEF10LQ9HCE6 1279 aa20.47■□□□□ 0.87
UPF3A-206ENST00000480362 MYH4Q9Y623 1939 aa20.47■□□□□ 0.87
UPF3A-206ENST00000480362 A0A1W2PRG0 241 aa20.46■□□□□ 0.87
UPF3A-206ENST00000480362 USP17L5A8MUK1 530 aa20.46■□□□□ 0.87
UPF3A-206ENST00000480362 PPP1R12BO60237 982 aaPredicted RBP20.46■□□□□ 0.87
UPF3A-206ENST00000480362 IFNAR1P17181 557 aa20.46■□□□□ 0.87
UPF3A-206ENST00000480362 SCYL3Q8IZE3 742 aa20.46■□□□□ 0.87
UPF3A-206ENST00000480362 CMTR1Q8N1G2 835 aaKnown RBP20.46■□□□□ 0.87
UPF3A-206ENST00000480362 ZKSCAN4Q969J2 545 aaPredicted RBP20.46■□□□□ 0.87
UPF3A-206ENST00000480362 MAD2L2Q9UI95 211 aa20.46■□□□□ 0.87
UPF3A-206ENST00000480362 ATAD5Q96QE3 1844 aa20.46■□□□□ 0.87
UPF3A-206ENST00000480362 PALM3A6NDB9 673 aaPredicted RBP20.45■□□□□ 0.86
UPF3A-206ENST00000480362 PLEKHA8P1O95397 391 aa20.45■□□□□ 0.86
UPF3A-206ENST00000480362 PARP1P09874 1014 aaKnown RBP20.45■□□□□ 0.86
UPF3A-206ENST00000480362 PDHBP11177 359 aa20.45■□□□□ 0.86
UPF3A-206ENST00000480362 MAP3K9P80192 1104 aa20.45■□□□□ 0.86
UPF3A-206ENST00000480362 USP17L2Q6R6M4 530 aa20.45■□□□□ 0.86
UPF3A-206ENST00000480362 TMTC3Q6ZXV5 915 aa20.45■□□□□ 0.86
UPF3A-206ENST00000480362 RASGRP2Q7LDG7 609 aa20.45■□□□□ 0.86
UPF3A-206ENST00000480362 CCDC84Q86UT8 332 aaPredicted RBP20.45■□□□□ 0.86
UPF3A-206ENST00000480362 STAG2Q8N3U4 1231 aa20.45■□□□□ 0.86
UPF3A-206ENST00000480362 CCDC82Q8N4S0 544 aa20.45■□□□□ 0.86
UPF3A-206ENST00000480362 ACER1Q8TDN7 264 aa20.45■□□□□ 0.86
UPF3A-206ENST00000480362 PHKBQ93100 1093 aa20.45■□□□□ 0.86
UPF3A-206ENST00000480362 CHMP5Q9NZZ3 219 aa20.45■□□□□ 0.86
UPF3A-206ENST00000480362 CIZ1Q9ULV3 898 aaPredicted RBP20.45■□□□□ 0.86
UPF3A-206ENST00000480362 SNHG28P0DPA3 235 aa20.44■□□□□ 0.86
UPF3A-206ENST00000480362 FDPSP14324 419 aaKnown RBP20.44■□□□□ 0.86
UPF3A-206ENST00000480362 ECE1P42892 770 aa20.44■□□□□ 0.86
UPF3A-206ENST00000480362 GNAQP50148 359 aa20.44■□□□□ 0.86
UPF3A-206ENST00000480362 SSRP1Q08945 709 aaKnown RBP20.44■□□□□ 0.86
UPF3A-206ENST00000480362 NOL9Q5SY16 702 aaKnown RBP20.44■□□□□ 0.86
UPF3A-206ENST00000480362 SLFN13Q68D06 897 aa20.44■□□□□ 0.86
UPF3A-206ENST00000480362 SRBD1Q8N5C6 995 aaKnown RBP20.44■□□□□ 0.86
UPF3A-206ENST00000480362 FAM184AQ8NB25 1140 aa20.44■□□□□ 0.86
UPF3A-206ENST00000480362 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.44■□□□□ 0.86
UPF3A-206ENST00000480362 PICK1Q9NRD5 415 aa20.44■□□□□ 0.86
UPF3A-206ENST00000480362 ORC3Q9UBD5 711 aaPredicted RBP20.44■□□□□ 0.86
UPF3A-206ENST00000480362 SYNPO2Q9UMS6 1093 aa20.44■□□□□ 0.86
UPF3A-206ENST00000480362 TMX2Q9Y320 296 aa20.44■□□□□ 0.86
UPF3A-206ENST00000480362 F5H6K3 240 aa20.43■□□□□ 0.86
UPF3A-206ENST00000480362 TRAF5O00463 557 aa20.43■□□□□ 0.86
UPF3A-206ENST00000480362 RAD21O60216 631 aa20.43■□□□□ 0.86
UPF3A-206ENST00000480362 FMNL1O95466 1100 aaPredicted RBP20.43■□□□□ 0.86
UPF3A-206ENST00000480362 GOLGA8HP0CJ92 632 aa20.43■□□□□ 0.86
UPF3A-206ENST00000480362 IREB2P48200 963 aaKnown RBP20.43■□□□□ 0.86
UPF3A-206ENST00000480362 KLRC3Q07444 240 aa20.43■□□□□ 0.86
UPF3A-206ENST00000480362 FUT2Q10981 343 aa20.43■□□□□ 0.86
UPF3A-206ENST00000480362 NBPF11Q86T75 865 aa20.43■□□□□ 0.86
UPF3A-206ENST00000480362 GMCL1P1Q8NEA9 526 aa20.43■□□□□ 0.86
UPF3A-206ENST00000480362 SLC26A6Q9BXS9 759 aa20.43■□□□□ 0.86
UPF3A-206ENST00000480362 DOCK1Q14185 1865 aa20.43■□□□□ 0.86
UPF3A-206ENST00000480362 KLRF2D3W0D1 207 aa20.42■□□□□ 0.86
UPF3A-206ENST00000480362 PTPRAP18433 802 aa20.42■□□□□ 0.86
UPF3A-206ENST00000480362 TTLL12Q14166 644 aaPredicted RBP20.42■□□□□ 0.86
UPF3A-206ENST00000480362 ASPRV1Q53RT3 343 aa20.42■□□□□ 0.86
UPF3A-206ENST00000480362 LARP1BQ659C4 914 aaKnown RBP20.42■□□□□ 0.86
UPF3A-206ENST00000480362 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.42■□□□□ 0.86
UPF3A-206ENST00000480362 TRIM22Q8IYM9 498 aa20.42■□□□□ 0.86
UPF3A-206ENST00000480362 DCAF4Q8WV16 495 aa20.42■□□□□ 0.86
UPF3A-206ENST00000480362 LZTS2Q9BRK4 669 aa20.42■□□□□ 0.86
UPF3A-206ENST00000480362 SH2D4AQ9H788 454 aa20.42■□□□□ 0.86
UPF3A-206ENST00000480362 GPCPD1Q9NPB8 672 aa20.42■□□□□ 0.86
UPF3A-206ENST00000480362 KIF3AQ9Y496 699 aa20.42■□□□□ 0.86
UPF3A-206ENST00000480362 FRMPD2Q68DX3 1309 aaPredicted RBP20.42■□□□□ 0.86
UPF3A-206ENST00000480362 NDUFB10O96000 172 aa20.41■□□□□ 0.86
UPF3A-206ENST00000480362 PDCP20941 246 aa20.41■□□□□ 0.86
UPF3A-206ENST00000480362 SYT1P21579 422 aa20.41■□□□□ 0.86
UPF3A-206ENST00000480362 SLC1A4P43007 532 aa20.41■□□□□ 0.86
UPF3A-206ENST00000480362 FMR1Q06787 632 aaKnown RBP eCLIP20.41■□□□□ 0.86
UPF3A-206ENST00000480362 ZNF543Q08ER8 600 aa20.41■□□□□ 0.86
UPF3A-206ENST00000480362 CCDC96Q2M329 555 aa20.41■□□□□ 0.86
UPF3A-206ENST00000480362 MOB2Q70IA6 237 aa20.41■□□□□ 0.86
UPF3A-206ENST00000480362 RNF26Q9BY78 433 aaPredicted RBP20.41■□□□□ 0.86
UPF3A-206ENST00000480362 GOPCQ9HD26 462 aa20.41■□□□□ 0.86
UPF3A-206ENST00000480362 STK36Q9NRP7 1315 aa20.41■□□□□ 0.86
UPF3A-206ENST00000480362 PRPF3O43395 683 aaKnown RBP20.4■□□□□ 0.86
UPF3A-206ENST00000480362 NUCB2P80303 420 aa20.4■□□□□ 0.86
UPF3A-206ENST00000480362 AKAP17AQ02040 695 aaKnown RBP20.4■□□□□ 0.86
UPF3A-206ENST00000480362 PKP1Q13835 747 aa20.4■□□□□ 0.86
UPF3A-206ENST00000480362 VGLL4Q14135 290 aa20.4■□□□□ 0.86
UPF3A-206ENST00000480362 ZYXQ15942 572 aaKnown RBP20.4■□□□□ 0.86
UPF3A-206ENST00000480362 MAP3K11Q16584 847 aa20.4■□□□□ 0.86
UPF3A-206ENST00000480362 GPATCH4Q5T3I0 446 aaKnown RBP20.4■□□□□ 0.86
UPF3A-206ENST00000480362 ARMC9Q7Z3E5 817 aa20.4■□□□□ 0.86
UPF3A-206ENST00000480362 CNTNAP5Q8WYK1 1306 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms