RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 ZBTB47Q9UFB7 747 aaPredicted RBP8.58□□□□□ -1.04
COL17A1-205ENST00000480127 PRKAG2Q9UGJ0 569 aa8.58□□□□□ -1.04
COL17A1-205ENST00000480127 DDX19BQ9UMR2 479 aa8.58□□□□□ -1.04
COL17A1-205ENST00000480127 ATP11BQ9Y2G3 1177 aa8.58□□□□□ -1.04
COL17A1-205ENST00000480127 FOCADQ5VW36 1801 aa8.58□□□□□ -1.04
COL17A1-205ENST00000480127 RAD21O60216 631 aa8.57□□□□□ -1.04
COL17A1-205ENST00000480127 IGSF3O75054 1194 aa8.57□□□□□ -1.04
COL17A1-205ENST00000480127 RLBP1P12271 317 aa8.57□□□□□ -1.04
COL17A1-205ENST00000480127 GUCY1A2P33402 732 aa8.57□□□□□ -1.04
COL17A1-205ENST00000480127 USP14P54578 494 aa8.57□□□□□ -1.04
COL17A1-205ENST00000480127 SMAD3P84022 425 aaKnown RBP8.57□□□□□ -1.04
COL17A1-205ENST00000480127 TRIM60Q495X7 471 aa8.57□□□□□ -1.04
COL17A1-205ENST00000480127 CEP85Q6P2H3 762 aa8.57□□□□□ -1.04
COL17A1-205ENST00000480127 SAMD1Q6SPF0 538 aaPredicted RBP8.57□□□□□ -1.04
COL17A1-205ENST00000480127 SH3RF1Q7Z6J0 888 aa8.57□□□□□ -1.04
COL17A1-205ENST00000480127 TTC6Q86TZ1 520 aa8.57□□□□□ -1.04
COL17A1-205ENST00000480127 ARRDC4Q8NCT1 418 aa8.57□□□□□ -1.04
COL17A1-205ENST00000480127 ZNF512BQ96KM6 892 aaPredicted RBP8.57□□□□□ -1.04
COL17A1-205ENST00000480127 CRNKL1Q9BZJ0 848 aaKnown RBP8.57□□□□□ -1.04
COL17A1-205ENST00000480127 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.57□□□□□ -1.04
COL17A1-205ENST00000480127 EHD4Q9H223 541 aa8.57□□□□□ -1.04
COL17A1-205ENST00000480127 TLR7Q9NYK1 1049 aaKnown RBP8.57□□□□□ -1.04
COL17A1-205ENST00000480127 COG6Q9Y2V7 657 aa8.57□□□□□ -1.04
COL17A1-205ENST00000480127 IVNS1ABPQ9Y6Y0 642 aa8.57□□□□□ -1.04
COL17A1-205ENST00000480127 RLFQ13129 1914 aa8.56□□□□□ -1.04
COL17A1-205ENST00000480127 MAGEB6P1A0A0J9YX57 407 aa8.56□□□□□ -1.04
COL17A1-205ENST00000480127 TRIM43BA6NCK2 446 aa8.56□□□□□ -1.04
COL17A1-205ENST00000480127 COBLO75128 1261 aa8.56□□□□□ -1.04
COL17A1-205ENST00000480127 ITGB8P26012 769 aa8.56□□□□□ -1.04
COL17A1-205ENST00000480127 ADORA2AP29274 412 aa8.56□□□□□ -1.04
COL17A1-205ENST00000480127 ABCB5Q2M3G0 1257 aa8.56□□□□□ -1.04
COL17A1-205ENST00000480127 SLC9C2Q5TAH2 1124 aa8.56□□□□□ -1.04
COL17A1-205ENST00000480127 C1orf53Q5VUE5 145 aa8.56□□□□□ -1.04
COL17A1-205ENST00000480127 ANO1Q5XXA6 986 aa8.56□□□□□ -1.04
COL17A1-205ENST00000480127 OLFML2BQ68BL8 750 aa8.56□□□□□ -1.04
COL17A1-205ENST00000480127 DPP9Q86TI2 863 aa8.56□□□□□ -1.04
COL17A1-205ENST00000480127 TRIM43Q96BQ3 446 aaPredicted RBP8.56□□□□□ -1.04
COL17A1-205ENST00000480127 KIF1BPQ96EK5 621 aa8.56□□□□□ -1.04
COL17A1-205ENST00000480127 GPATCH3Q96I76 525 aa8.56□□□□□ -1.04
COL17A1-205ENST00000480127 MOV10L1Q9BXT6 1211 aaKnown RBP8.56□□□□□ -1.04
COL17A1-205ENST00000480127 RPAP3Q9H6T3 665 aaPredicted RBP8.56□□□□□ -1.04
COL17A1-205ENST00000480127 PRDM5Q9NQX1 630 aaPredicted RBP8.56□□□□□ -1.04
COL17A1-205ENST00000480127 PDLIM7Q9NR12 457 aa8.56□□□□□ -1.04
COL17A1-205ENST00000480127 SERPINB13Q9UIV8 391 aa8.56□□□□□ -1.04
COL17A1-205ENST00000480127 DBNLQ9UJU6 430 aaKnown RBP8.56□□□□□ -1.04
COL17A1-205ENST00000480127 ZNF236Q9UL36 1845 aa8.55□□□□□ -1.04
COL17A1-205ENST00000480127 A0A1W2PRG0 241 aa8.55□□□□□ -1.04
COL17A1-205ENST00000480127 KBTBD13C9JR72 458 aa8.55□□□□□ -1.04
COL17A1-205ENST00000480127 GOLIM4O00461 696 aa8.55□□□□□ -1.04
COL17A1-205ENST00000480127 SEPT4O43236 478 aa8.55□□□□□ -1.04
COL17A1-205ENST00000480127 STRNO43815 780 aa8.55□□□□□ -1.04
COL17A1-205ENST00000480127 SHMT1P34896 483 aa8.55□□□□□ -1.04
COL17A1-205ENST00000480127 ADCYAP1R1P41586 468 aa8.55□□□□□ -1.04
COL17A1-205ENST00000480127 PLCD1P51178 756 aa8.55□□□□□ -1.04
COL17A1-205ENST00000480127 EPHB4P54760 987 aa8.55□□□□□ -1.04
COL17A1-205ENST00000480127 LRRC41Q15345 812 aa8.55□□□□□ -1.04
COL17A1-205ENST00000480127 CERKLQ49MI3 558 aaPredicted RBP8.55□□□□□ -1.04
COL17A1-205ENST00000480127 PRAMEF19Q5SWL8 479 aa8.55□□□□□ -1.04
COL17A1-205ENST00000480127 RHPN1Q8TCX5 695 aa8.55□□□□□ -1.04
COL17A1-205ENST00000480127 EAF2Q96CJ1 260 aaPredicted RBP8.55□□□□□ -1.04
COL17A1-205ENST00000480127 MCM9Q9NXL9 1143 aa8.55□□□□□ -1.04
COL17A1-205ENST00000480127 RCAN3Q9UKA8 241 aa8.55□□□□□ -1.04
COL17A1-205ENST00000480127 NOP58Q9Y2X3 529 aaKnown RBP8.55□□□□□ -1.04
COL17A1-205ENST00000480127 MYO5AQ9Y4I1 1855 aaKnown RBP8.54□□□□□ -1.04
COL17A1-205ENST00000480127 FOSL2P15408 326 aa8.54□□□□□ -1.04
COL17A1-205ENST00000480127 ERCC3P19447 782 aa8.54□□□□□ -1.04
COL17A1-205ENST00000480127 EVX2Q03828 476 aa8.54□□□□□ -1.04
COL17A1-205ENST00000480127 TLE2Q04725 743 aa8.54□□□□□ -1.04
COL17A1-205ENST00000480127 GABPAQ06546 454 aa8.54□□□□□ -1.04
COL17A1-205ENST00000480127 COG2Q14746 738 aa8.54□□□□□ -1.04
COL17A1-205ENST00000480127 SEPT2Q15019 361 aa8.54□□□□□ -1.04
COL17A1-205ENST00000480127 FAM47AQ5JRC9 791 aa8.54□□□□□ -1.04
COL17A1-205ENST00000480127 KIAA1755Q5JYT7 1200 aa8.54□□□□□ -1.04
COL17A1-205ENST00000480127 RPAP2Q8IXW5 612 aaPredicted RBP8.54□□□□□ -1.04
COL17A1-205ENST00000480127 SHCBP1Q8NEM2 672 aa8.54□□□□□ -1.04
COL17A1-205ENST00000480127 FERMT2Q96AC1 680 aa8.54□□□□□ -1.04
COL17A1-205ENST00000480127 SPATC1LQ9H0A9 340 aa8.54□□□□□ -1.04
COL17A1-205ENST00000480127 ISY1Q9ULR0 285 aaKnown RBP8.54□□□□□ -1.04
COL17A1-205ENST00000480127 SPTBN5Q9NRC6 3674 aaKnown RBP8.54□□□□□ -1.04
COL17A1-205ENST00000480127 TMEM265A0A087WTH1 108 aa8.53□□□□□ -1.04
COL17A1-205ENST00000480127 RAB11FIP3O75154 756 aa8.53□□□□□ -1.04
COL17A1-205ENST00000480127 MYCNP04198 464 aaPredicted RBP8.53□□□□□ -1.04
COL17A1-205ENST00000480127 PDE6AP16499 860 aa8.53□□□□□ -1.04
COL17A1-205ENST00000480127 GRIN2CQ14957 1233 aa8.53□□□□□ -1.04
COL17A1-205ENST00000480127 ZSCAN25Q6NSZ9 544 aa8.53□□□□□ -1.04
COL17A1-205ENST00000480127 TMED8Q6PL24 325 aaPredicted RBP8.53□□□□□ -1.04
COL17A1-205ENST00000480127 USP38Q8NB14 1042 aa8.53□□□□□ -1.04
COL17A1-205ENST00000480127 SYMPKQ92797 1274 aaKnown RBP8.53□□□□□ -1.04
COL17A1-205ENST00000480127 MAML3Q96JK9 1138 aa8.53□□□□□ -1.04
COL17A1-205ENST00000480127 RIOK1Q9BRS2 568 aaKnown RBP8.53□□□□□ -1.04
COL17A1-205ENST00000480127 TANGO6Q9C0B7 1094 aa8.53□□□□□ -1.04
COL17A1-205ENST00000480127 ANTXR1Q9H6X2 564 aa8.53□□□□□ -1.04
COL17A1-205ENST00000480127 PAG1Q9NWQ8 432 aa8.53□□□□□ -1.04
COL17A1-205ENST00000480127 HOXC10Q9NYD6 342 aa8.53□□□□□ -1.04
COL17A1-205ENST00000480127 PHF24Q9UPV7 400 aa8.53□□□□□ -1.04
COL17A1-205ENST00000480127 TACC3Q9Y6A5 838 aa8.53□□□□□ -1.04
COL17A1-205ENST00000480127 A0A0G2JMZ2 1700 aa8.53□□□□□ -1.04
COL17A1-205ENST00000480127 MYH1P12882 1939 aa8.52□□□□□ -1.04
COL17A1-205ENST00000480127 KIAA0355O15063 1070 aa8.52□□□□□ -1.05
COL17A1-205ENST00000480127 CLTBP09497 229 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms