RNA–Protein interactions for RNA: ENST00000480024.1

FN1-220, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-220ENST00000480024 SPICE1Q8N0Z3 855 aa8.05□□□□□ -1.12
FN1-220ENST00000480024 ANKLE1Q8NAG6 615 aa8.05□□□□□ -1.12
FN1-220ENST00000480024 USP6NLQ92738 828 aa8.05□□□□□ -1.12
FN1-220ENST00000480024 NBPF3Q9H094 633 aa8.05□□□□□ -1.12
FN1-220ENST00000480024 C11orf49Q9H6J7 331 aa8.05□□□□□ -1.12
FN1-220ENST00000480024 SWAP70Q9UH65 585 aa8.05□□□□□ -1.12
FN1-220ENST00000480024 IVNS1ABPQ9Y6Y0 642 aa8.05□□□□□ -1.12
FN1-220ENST00000480024 GREB1LQ9C091 1923 aaPredicted RBP8.04□□□□□ -1.12
FN1-220ENST00000480024 SLC15A5A6NIM6 579 aa8.04□□□□□ -1.12
FN1-220ENST00000480024 USP17L12C9JPN9 530 aa8.04□□□□□ -1.12
FN1-220ENST00000480024 USP17L21D6R901 530 aa8.04□□□□□ -1.12
FN1-220ENST00000480024 GLRX3O76003 335 aaKnown RBP8.04□□□□□ -1.12
FN1-220ENST00000480024 CAPN2P17655 700 aa8.04□□□□□ -1.12
FN1-220ENST00000480024 MNX1P50219 401 aaPredicted RBP8.04□□□□□ -1.12
FN1-220ENST00000480024 GRB14Q14449 540 aa8.04□□□□□ -1.12
FN1-220ENST00000480024 UBE3CQ15386 1083 aa8.04□□□□□ -1.12
FN1-220ENST00000480024 KIAA1755Q5JYT7 1200 aa8.04□□□□□ -1.12
FN1-220ENST00000480024 LBX2Q6XYB7 198 aa8.04□□□□□ -1.12
FN1-220ENST00000480024 DDRGK1Q96HY6 314 aa8.04□□□□□ -1.12
FN1-220ENST00000480024 GPATCH3Q96I76 525 aa8.04□□□□□ -1.12
FN1-220ENST00000480024 ARHGEF10LQ9HCE6 1279 aa8.04□□□□□ -1.12
FN1-220ENST00000480024 ATP8A2Q9NTI2 1148 aa8.04□□□□□ -1.12
FN1-220ENST00000480024 ECHDC1Q9NTX5 307 aa8.04□□□□□ -1.12
FN1-220ENST00000480024 FLRT1Q9NZU1 646 aa8.04□□□□□ -1.12
FN1-220ENST00000480024 OGDHLQ9ULD0 1010 aa8.04□□□□□ -1.12
FN1-220ENST00000480024 ZMYND8Q9ULU4 1186 aaPredicted RBP8.04□□□□□ -1.12
FN1-220ENST00000480024 SLC4A4Q9Y6R1 1079 aa8.04□□□□□ -1.12
FN1-220ENST00000480024 SZT2Q5T011 3432 aa8.04□□□□□ -1.12
FN1-220ENST00000480024 PFASO15067 1338 aa8.03□□□□□ -1.12
FN1-220ENST00000480024 FLOT1O75955 427 aa8.03□□□□□ -1.12
FN1-220ENST00000480024 SYN1P17600 705 aa8.03□□□□□ -1.12
FN1-220ENST00000480024 PTPREP23469 700 aa8.03□□□□□ -1.12
FN1-220ENST00000480024 CDK8P49336 464 aa8.03□□□□□ -1.12
FN1-220ENST00000480024 ATP2B2Q01814 1243 aa8.03□□□□□ -1.12
FN1-220ENST00000480024 PLS1Q14651 629 aa8.03□□□□□ -1.12
FN1-220ENST00000480024 COG2Q14746 738 aa8.03□□□□□ -1.12
FN1-220ENST00000480024 C12orf60Q5U649 245 aa8.03□□□□□ -1.12
FN1-220ENST00000480024 MFSD14CQ5VZR4 134 aa8.03□□□□□ -1.12
FN1-220ENST00000480024 ZSCAN25Q6NSZ9 544 aa8.03□□□□□ -1.12
FN1-220ENST00000480024 C16orf86Q6ZW13 317 aa8.03□□□□□ -1.12
FN1-220ENST00000480024 STK11IPQ8N1F8 1099 aa8.03□□□□□ -1.12
FN1-220ENST00000480024 NPLOC4Q8TAT6 608 aa8.03□□□□□ -1.12
FN1-220ENST00000480024 LPAR1Q92633 364 aa8.03□□□□□ -1.12
FN1-220ENST00000480024 ATG4CQ96DT6 458 aa8.03□□□□□ -1.12
FN1-220ENST00000480024 MOV10L1Q9BXT6 1211 aaKnown RBP8.03□□□□□ -1.12
FN1-220ENST00000480024 PUS7LQ9H0K6 701 aaKnown RBP8.03□□□□□ -1.12
FN1-220ENST00000480024 PRO3102Q9H379 93 aa8.03□□□□□ -1.12
FN1-220ENST00000480024 SH2D4AQ9H788 454 aa8.03□□□□□ -1.12
FN1-220ENST00000480024 STAP2Q9UGK3 403 aa8.03□□□□□ -1.12
FN1-220ENST00000480024 MYH4Q9Y623 1939 aa8.03□□□□□ -1.12
FN1-220ENST00000480024 LAMA3Q16787 3333 aa8.03□□□□□ -1.12
FN1-220ENST00000480024 RAD21O60216 631 aa8.02□□□□□ -1.13
FN1-220ENST00000480024 ERCC3P19447 782 aa8.02□□□□□ -1.13
FN1-220ENST00000480024 ADORA2AP29274 412 aa8.02□□□□□ -1.13
FN1-220ENST00000480024 CNGA1P29973 690 aa8.02□□□□□ -1.13
FN1-220ENST00000480024 CYP2C19P33261 490 aa8.02□□□□□ -1.13
FN1-220ENST00000480024 LHX8Q68G74 356 aa8.02□□□□□ -1.13
FN1-220ENST00000480024 CTR9Q6PD62 1173 aa8.02□□□□□ -1.13
FN1-220ENST00000480024 DPP9Q86TI2 863 aa8.02□□□□□ -1.13
FN1-220ENST00000480024 SIAH1Q8IUQ4 282 aa8.02□□□□□ -1.13
FN1-220ENST00000480024 SPATC1LQ9H0A9 340 aa8.02□□□□□ -1.13
FN1-220ENST00000480024 VCPKMTQ9H867 229 aa8.02□□□□□ -1.13
FN1-220ENST00000480024 HOXC10Q9NYD6 342 aa8.02□□□□□ -1.13
FN1-220ENST00000480024 ARPP21Q9UBL0 812 aaPredicted RBP8.02□□□□□ -1.13
FN1-220ENST00000480024 TMX2Q9Y320 296 aa8.02□□□□□ -1.13
FN1-220ENST00000480024 DNAH12Q6ZR08 3092 aa8.02□□□□□ -1.13
FN1-220ENST00000480024 PLXNA1Q9UIW2 1896 aa8.02□□□□□ -1.13
FN1-220ENST00000480024 ZNFX1Q9P2E3 1918 aaKnown RBP8.01□□□□□ -1.13
FN1-220ENST00000480024 WDR46O15213 610 aaKnown RBP8.01□□□□□ -1.13
FN1-220ENST00000480024 HOXC6P09630 235 aa8.01□□□□□ -1.13
FN1-220ENST00000480024 CYBAP13498 195 aa8.01□□□□□ -1.13
FN1-220ENST00000480024 EEF2P13639 858 aaKnown RBP8.01□□□□□ -1.13
FN1-220ENST00000480024 DSG3P32926 999 aa8.01□□□□□ -1.13
FN1-220ENST00000480024 NCAPG2Q86XI2 1143 aa8.01□□□□□ -1.13
FN1-220ENST00000480024 MB21D1Q8N884 522 aa8.01□□□□□ -1.13
FN1-220ENST00000480024 KBTBD3Q8NAB2 608 aa8.01□□□□□ -1.13
FN1-220ENST00000480024 TRPV1Q8NER1 839 aa8.01□□□□□ -1.13
FN1-220ENST00000480024 APPBP2Q92624 585 aa8.01□□□□□ -1.13
FN1-220ENST00000480024 OSBP2Q969R2 916 aa8.01□□□□□ -1.13
FN1-220ENST00000480024 CCDC17Q96LX7 622 aa8.01□□□□□ -1.13
FN1-220ENST00000480024 STRBPQ96SI9 672 aaKnown RBP8.01□□□□□ -1.13
FN1-220ENST00000480024 DCTPP1Q9H773 170 aa8.01□□□□□ -1.13
FN1-220ENST00000480024 EPB41L4AQ9HCS5 686 aaPredicted RBP8.01□□□□□ -1.13
FN1-220ENST00000480024 GOPCQ9HD26 462 aa8.01□□□□□ -1.13
FN1-220ENST00000480024 FBXO28Q9NVF7 368 aa8.01□□□□□ -1.13
FN1-220ENST00000480024 DDX20Q9UHI6 824 aaKnown RBP8.01□□□□□ -1.13
FN1-220ENST00000480024 ROBO3Q96MS0 1386 aa8□□□□□ -1.13
FN1-220ENST00000480024 A0A1W2PPC1 479 aa8□□□□□ -1.13
FN1-220ENST00000480024 GSG1L2A8MUP6 293 aa8□□□□□ -1.13
FN1-220ENST00000480024 MINDY4BA8MYZ0 360 aa8□□□□□ -1.13
FN1-220ENST00000480024 M0R2C6 588 aa8□□□□□ -1.13
FN1-220ENST00000480024 SOX1O00570 391 aaPredicted RBP8□□□□□ -1.13
FN1-220ENST00000480024 GPAA1O43292 621 aa8□□□□□ -1.13
FN1-220ENST00000480024 COBLO75128 1261 aa8□□□□□ -1.13
FN1-220ENST00000480024 MYCNP04198 464 aaPredicted RBP8□□□□□ -1.13
FN1-220ENST00000480024 COL6A1P12109 1028 aa8□□□□□ -1.13
FN1-220ENST00000480024 MAGEA10P43363 369 aaPredicted RBP8□□□□□ -1.13
FN1-220ENST00000480024 TDO2P48775 406 aa8□□□□□ -1.13
FN1-220ENST00000480024 TMEM132BQ14DG7 1078 aa8□□□□□ -1.13
FN1-220ENST00000480024 LRRC26Q2I0M4 334 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms