RNA–Protein interactions for RNA: ENST00000479586.5

HMGN1-212, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 841 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-212ENST00000479586 ERCC3P19447 782 aa21.21■□□□□ 0.99
HMGN1-212ENST00000479586 CYP7A1P22680 504 aa21.21■□□□□ 0.99
HMGN1-212ENST00000479586 GUCY1A2P33402 732 aa21.21■□□□□ 0.99
HMGN1-212ENST00000479586 G3BP1Q13283 466 aaKnown RBP eCLIP21.21■□□□□ 0.99
HMGN1-212ENST00000479586 DBNDD2Q9BQY9 259 aa21.21■□□□□ 0.99
HMGN1-212ENST00000479586 SPATC1LQ9H0A9 340 aa21.21■□□□□ 0.99
HMGN1-212ENST00000479586 EHD4Q9H223 541 aa21.21■□□□□ 0.99
HMGN1-212ENST00000479586 PHF24Q9UPV7 400 aa21.21■□□□□ 0.99
HMGN1-212ENST00000479586 CHD9Q3L8U1 2897 aa21.21■□□□□ 0.99
HMGN1-212ENST00000479586 NCOR1O75376 2440 aa21.2■□□□□ 0.99
HMGN1-212ENST00000479586 KIAA0355O15063 1070 aa21.2■□□□□ 0.98
HMGN1-212ENST00000479586 RAG1P15918 1043 aa21.2■□□□□ 0.98
HMGN1-212ENST00000479586 ZAP70P43403 619 aa21.2■□□□□ 0.98
HMGN1-212ENST00000479586 USP5P45974 858 aa21.2■□□□□ 0.98
HMGN1-212ENST00000479586 MIGA1Q8NAN2 632 aa21.2■□□□□ 0.98
HMGN1-212ENST00000479586 ZNF576Q9H609 170 aa21.2■□□□□ 0.98
HMGN1-212ENST00000479586 SMCHD1A6NHR9 2005 aa21.19■□□□□ 0.98
HMGN1-212ENST00000479586 PQBP1O60828 265 aaKnown RBP21.19■□□□□ 0.98
HMGN1-212ENST00000479586 SHMT1P34896 483 aa21.19■□□□□ 0.98
HMGN1-212ENST00000479586 FPGSQ05932 587 aa21.19■□□□□ 0.98
HMGN1-212ENST00000479586 SHCBP1Q8NEM2 672 aa21.19■□□□□ 0.98
HMGN1-212ENST00000479586 XPNPEP3Q9NQH7 507 aa21.19■□□□□ 0.98
HMGN1-212ENST00000479586 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.18■□□□□ 0.98
HMGN1-212ENST00000479586 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.18■□□□□ 0.98
HMGN1-212ENST00000479586 COG2Q14746 738 aa21.18■□□□□ 0.98
HMGN1-212ENST00000479586 SEPT2Q15019 361 aa21.18■□□□□ 0.98
HMGN1-212ENST00000479586 TNNI3KQ59H18 835 aa21.18■□□□□ 0.98
HMGN1-212ENST00000479586 CCDC158Q5M9N0 1113 aa21.18■□□□□ 0.98
HMGN1-212ENST00000479586 PPM1EQ8WY54 764 aa21.18■□□□□ 0.98
HMGN1-212ENST00000479586 TIFAQ96CG3 184 aa21.18■□□□□ 0.98
HMGN1-212ENST00000479586 MAML3Q96JK9 1138 aa21.18■□□□□ 0.98
HMGN1-212ENST00000479586 TANGO6Q9C0B7 1094 aa21.18■□□□□ 0.98
HMGN1-212ENST00000479586 CABP5Q9NP86 173 aa21.18■□□□□ 0.98
HMGN1-212ENST00000479586 FPGT-TNNI3KV9GXZ4 949 aa21.18■□□□□ 0.98
HMGN1-212ENST00000479586 A0A1W2PRG0 241 aa21.17■□□□□ 0.98
HMGN1-212ENST00000479586 PGK1P00558 417 aa21.17■□□□□ 0.98
HMGN1-212ENST00000479586 SLC5A4Q9NY91 659 aa21.17■□□□□ 0.98
HMGN1-212ENST00000479586 HOXC10Q9NYD6 342 aa21.17■□□□□ 0.98
HMGN1-212ENST00000479586 A0A1W2PQ45 241 aaPredicted RBP21.16■□□□□ 0.98
HMGN1-212ENST00000479586 A0A1W2PQY0 241 aa21.16■□□□□ 0.98
HMGN1-212ENST00000479586 RARBP10826 455 aa21.16■□□□□ 0.98
HMGN1-212ENST00000479586 PLCD1P51178 756 aa21.16■□□□□ 0.98
HMGN1-212ENST00000479586 PLS1Q14651 629 aa21.16■□□□□ 0.98
HMGN1-212ENST00000479586 TTC6Q86TZ1 520 aa21.16■□□□□ 0.98
HMGN1-212ENST00000479586 NCAPG2Q86XI2 1143 aa21.16■□□□□ 0.98
HMGN1-212ENST00000479586 TMEM39AQ9NV64 488 aa21.16■□□□□ 0.98
HMGN1-212ENST00000479586 MYO9BQ13459 2157 aa21.15■□□□□ 0.98
HMGN1-212ENST00000479586 IDH1O75874 414 aaKnown RBP21.15■□□□□ 0.98
HMGN1-212ENST00000479586 GNAI2P04899 355 aa21.15■□□□□ 0.98
HMGN1-212ENST00000479586 KIAA1755Q5JYT7 1200 aa21.15■□□□□ 0.98
HMGN1-212ENST00000479586 ABRAQ8N0Z2 381 aa21.15■□□□□ 0.98
HMGN1-212ENST00000479586 LENG1Q96BZ8 264 aaPredicted RBP21.15■□□□□ 0.98
HMGN1-212ENST00000479586 MROH8Q9H579 483 aa21.15■□□□□ 0.98
HMGN1-212ENST00000479586 GPR108Q9NPR9 543 aa21.15■□□□□ 0.98
HMGN1-212ENST00000479586 IGSF3O75054 1194 aa21.14■□□□□ 0.97
HMGN1-212ENST00000479586 PLA2G5P39877 138 aa21.14■□□□□ 0.97
HMGN1-212ENST00000479586 EVX2Q03828 476 aa21.14■□□□□ 0.97
HMGN1-212ENST00000479586 FAAP100Q0VG06 881 aa21.14■□□□□ 0.97
HMGN1-212ENST00000479586 RNF180Q86T96 592 aa21.14■□□□□ 0.97
HMGN1-212ENST00000479586 TRMT2AQ8IZ69 625 aaKnown RBP21.14■□□□□ 0.97
HMGN1-212ENST00000479586 MAGEB6Q8N7X4 407 aa21.14■□□□□ 0.97
HMGN1-212ENST00000479586 ADAMTS19Q8TE59 1207 aa21.14■□□□□ 0.97
HMGN1-212ENST00000479586 ATXN2LQ8WWM7 1075 aaKnown RBP21.14■□□□□ 0.97
HMGN1-212ENST00000479586 ZNF512BQ96KM6 892 aaPredicted RBP21.14■□□□□ 0.97
HMGN1-212ENST00000479586 ASB2Q96Q27 587 aa21.14■□□□□ 0.97
HMGN1-212ENST00000479586 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.14■□□□□ 0.974e-7■■■□□ 17.3
HMGN1-212ENST00000479586 PRDM12Q9H4Q4 367 aa21.14■□□□□ 0.97
HMGN1-212ENST00000479586 THEGQ9P2T0 379 aa21.14■□□□□ 0.97
HMGN1-212ENST00000479586 ZNFX1Q9P2E3 1918 aaKnown RBP21.14■□□□□ 0.97
HMGN1-212ENST00000479586 CT47B1P0C2W7 299 aaPredicted RBP21.13■□□□□ 0.97
HMGN1-212ENST00000479586 TAL1P17542 331 aaPredicted RBP21.13■□□□□ 0.97
HMGN1-212ENST00000479586 PBX2P40425 430 aa21.13■□□□□ 0.97
HMGN1-212ENST00000479586 MB21D1Q8N884 522 aa21.13■□□□□ 0.97
HMGN1-212ENST00000479586 ATG4CQ96DT6 458 aa21.13■□□□□ 0.97
HMGN1-212ENST00000479586 GAS2L1Q99501 681 aaPredicted RBP21.13■□□□□ 0.97
HMGN1-212ENST00000479586 CHD7Q9P2D1 2997 aa21.12■□□□□ 0.97
HMGN1-212ENST00000479586 PLXNA1Q9UIW2 1896 aa21.12■□□□□ 0.97
HMGN1-212ENST00000479586 GRXCR1A8MXD5 290 aa21.12■□□□□ 0.97
HMGN1-212ENST00000479586 MPHOSPH10O00566 681 aaKnown RBP21.12■□□□□ 0.97
HMGN1-212ENST00000479586 FCER1AP12319 257 aa21.12■□□□□ 0.97
HMGN1-212ENST00000479586 DSG3P32926 999 aa21.12■□□□□ 0.97
HMGN1-212ENST00000479586 ANKRD33Q7Z3H0 272 aa21.12■□□□□ 0.97
HMGN1-212ENST00000479586 CERS3Q8IU89 383 aa21.12■□□□□ 0.97
HMGN1-212ENST00000479586 SLC44A5Q8NCS7 719 aa21.12■□□□□ 0.97
HMGN1-212ENST00000479586 PBX4Q9BYU1 374 aa21.12■□□□□ 0.97
HMGN1-212ENST00000479586 TLR7Q9NYK1 1049 aaKnown RBP21.12■□□□□ 0.97
HMGN1-212ENST00000479586 NRBP1Q9UHY1 535 aa21.12■□□□□ 0.97
HMGN1-212ENST00000479586 NAV1Q8NEY1 1877 aa21.11■□□□□ 0.97
HMGN1-212ENST00000479586 FLOT1O75955 427 aa21.11■□□□□ 0.97
HMGN1-212ENST00000479586 PGK2P07205 417 aa21.11■□□□□ 0.97
HMGN1-212ENST00000479586 RARSP54136 660 aaKnown RBP21.11■□□□□ 0.97
HMGN1-212ENST00000479586 GABPAQ06546 454 aa21.11■□□□□ 0.97
HMGN1-212ENST00000479586 AKNAD1Q5T1N1 836 aa21.11■□□□□ 0.97
HMGN1-212ENST00000479586 SAMD1Q6SPF0 538 aaPredicted RBP21.11■□□□□ 0.97
HMGN1-212ENST00000479586 ARHGAP45Q92619 1136 aa21.11■□□□□ 0.97
HMGN1-212ENST00000479586 UHRF1Q96T88 793 aaPredicted RBP21.11■□□□□ 0.97
HMGN1-212ENST00000479586 DBNLQ9UJU6 430 aaKnown RBP21.11■□□□□ 0.97
HMGN1-212ENST00000479586 TNNQ9UQP3 1299 aa21.11■□□□□ 0.97
HMGN1-212ENST00000479586 ROBO3Q96MS0 1386 aa21.1■□□□□ 0.97
HMGN1-212ENST00000479586 REV3LO60673 3130 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms