RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 PIH1D3Q9NQM4 214 aaKnown RBP8.1□□□□□ -1.11
VCP-205ENST00000479300 PDLIM7Q9NR12 457 aa8.1□□□□□ -1.11
VCP-205ENST00000479300 PPP4R2Q9NY27 417 aa8.1□□□□□ -1.11
VCP-205ENST00000479300 LRP2BPQ9P2M1 347 aa8.1□□□□□ -1.11
VCP-205ENST00000479300 RAPGEFL1Q9UHV5 662 aa8.1□□□□□ -1.11
VCP-205ENST00000479300 ATP11BQ9Y2G3 1177 aa8.1□□□□□ -1.11
VCP-205ENST00000479300 BDP1A6H8Y1 2624 aa8.1□□□□□ -1.11
VCP-205ENST00000479300 SPDYE16A6NNV3 312 aaPredicted RBP8.09□□□□□ -1.11
VCP-205ENST00000479300 USP17L15C9J2P7 530 aa8.09□□□□□ -1.11
VCP-205ENST00000479300 USP17L13C9JLJ4 530 aa8.09□□□□□ -1.11
VCP-205ENST00000479300 USP17L11C9JVI0 530 aa8.09□□□□□ -1.11
VCP-205ENST00000479300 USP17L18D6R9N7 530 aa8.09□□□□□ -1.11
VCP-205ENST00000479300 USP17L22D6RA61 530 aa8.09□□□□□ -1.11
VCP-205ENST00000479300 USP17L17D6RBQ6 530 aa8.09□□□□□ -1.11
VCP-205ENST00000479300 USP17L19D6RCP7 530 aa8.09□□□□□ -1.11
VCP-205ENST00000479300 USP17L20D6RJB6 530 aa8.09□□□□□ -1.11
VCP-205ENST00000479300 PITPNM1O00562 1244 aa8.09□□□□□ -1.11
VCP-205ENST00000479300 VCAM1P19320 739 aa8.09□□□□□ -1.11
VCP-205ENST00000479300 CNGA1P29973 690 aa8.09□□□□□ -1.11
VCP-205ENST00000479300 GUCY1A2P33402 732 aa8.09□□□□□ -1.11
VCP-205ENST00000479300 SMAD3P84022 425 aaKnown RBP8.09□□□□□ -1.11
VCP-205ENST00000479300 ATP8B2P98198 1209 aa8.09□□□□□ -1.11
VCP-205ENST00000479300 USP17L24Q0WX57 530 aa8.09□□□□□ -1.11
VCP-205ENST00000479300 MFSD14CQ5VZR4 134 aa8.09□□□□□ -1.11
VCP-205ENST00000479300 NAA16Q6N069 864 aaPredicted RBP8.09□□□□□ -1.11
VCP-205ENST00000479300 TATDN1Q6P1N9 297 aa8.09□□□□□ -1.11
VCP-205ENST00000479300 LBX2Q6XYB7 198 aa8.09□□□□□ -1.11
VCP-205ENST00000479300 CATSPERGQ6ZRH7 1159 aa8.09□□□□□ -1.11
VCP-205ENST00000479300 FOXP4Q8IVH2 680 aaPredicted RBP8.09□□□□□ -1.11
VCP-205ENST00000479300 GTF3C2Q8WUA4 911 aaPredicted RBP8.09□□□□□ -1.11
VCP-205ENST00000479300 GINM1Q9NU53 330 aa8.09□□□□□ -1.11
VCP-205ENST00000479300 MYH1P12882 1939 aa8.08□□□□□ -1.12
VCP-205ENST00000479300 COBLO75128 1261 aa8.08□□□□□ -1.12
VCP-205ENST00000479300 BAG3O95817 575 aa8.08□□□□□ -1.12
VCP-205ENST00000479300 PRR29P0C7W0 189 aa8.08□□□□□ -1.12
VCP-205ENST00000479300 ATP2B2Q01814 1243 aa8.08□□□□□ -1.12
VCP-205ENST00000479300 GSE1Q14687 1217 aa8.08□□□□□ -1.12
VCP-205ENST00000479300 HSP90AB4PQ58FF6 505 aa8.08□□□□□ -1.12
VCP-205ENST00000479300 KIAA1755Q5JYT7 1200 aa8.08□□□□□ -1.12
VCP-205ENST00000479300 PRAMEF19Q5SWL8 479 aa8.08□□□□□ -1.12
VCP-205ENST00000479300 WDR78Q5VTH9 848 aa8.08□□□□□ -1.12
VCP-205ENST00000479300 ERC1Q8IUD2 1116 aa8.08□□□□□ -1.12
VCP-205ENST00000479300 CRACR2BQ8N4Y2 399 aaPredicted RBP8.08□□□□□ -1.12
VCP-205ENST00000479300 DBNDD2Q9BQY9 259 aa8.08□□□□□ -1.12
VCP-205ENST00000479300 MOV10L1Q9BXT6 1211 aaKnown RBP8.08□□□□□ -1.12
VCP-205ENST00000479300 TRIM34Q9BYJ4 488 aa8.08□□□□□ -1.12
VCP-205ENST00000479300 KIAA1683Q9H0B3 1180 aa8.08□□□□□ -1.12
VCP-205ENST00000479300 GPR108Q9NPR9 543 aa8.08□□□□□ -1.12
VCP-205ENST00000479300 PRDM5Q9NQX1 630 aaPredicted RBP8.08□□□□□ -1.12
VCP-205ENST00000479300 REV3LO60673 3130 aa8.07□□□□□ -1.12
VCP-205ENST00000479300 A0A1W2PRG0 241 aa8.07□□□□□ -1.12
VCP-205ENST00000479300 MSCO60682 206 aa8.07□□□□□ -1.12
VCP-205ENST00000479300 HMMRO75330 724 aa8.07□□□□□ -1.12
VCP-205ENST00000479300 FOSL2P15408 326 aa8.07□□□□□ -1.12
VCP-205ENST00000479300 PLCG2P16885 1265 aa8.07□□□□□ -1.12
VCP-205ENST00000479300 ADORA2AP29274 412 aa8.07□□□□□ -1.12
VCP-205ENST00000479300 SHMT1P34896 483 aa8.07□□□□□ -1.12
VCP-205ENST00000479300 ADCYAP1R1P41586 468 aa8.07□□□□□ -1.12
VCP-205ENST00000479300 ZAP70P43403 619 aa8.07□□□□□ -1.12
VCP-205ENST00000479300 TLE2Q04725 743 aa8.07□□□□□ -1.12
VCP-205ENST00000479300 GRIN2CQ14957 1233 aa8.07□□□□□ -1.12
VCP-205ENST00000479300 LRRC41Q15345 812 aa8.07□□□□□ -1.12
VCP-205ENST00000479300 TNNI3KQ59H18 835 aa8.07□□□□□ -1.12
VCP-205ENST00000479300 FAM47AQ5JRC9 791 aa8.07□□□□□ -1.12
VCP-205ENST00000479300 CCAR1Q8IX12 1150 aaKnown RBP8.07□□□□□ -1.12
VCP-205ENST00000479300 SSH3Q8TE77 659 aa8.07□□□□□ -1.12
VCP-205ENST00000479300 FERMT2Q96AC1 680 aa8.07□□□□□ -1.12
VCP-205ENST00000479300 RPAP3Q9H6T3 665 aaPredicted RBP8.07□□□□□ -1.12
VCP-205ENST00000479300 C1orf115Q9H7X2 142 aa8.07□□□□□ -1.12
VCP-205ENST00000479300 TLR7Q9NYK1 1049 aaKnown RBP8.07□□□□□ -1.12
VCP-205ENST00000479300 FPGT-TNNI3KV9GXZ4 949 aa8.07□□□□□ -1.12
VCP-205ENST00000479300 CHD7Q9P2D1 2997 aa8.07□□□□□ -1.12
VCP-205ENST00000479300 SEPT4O43236 478 aa8.06□□□□□ -1.12
VCP-205ENST00000479300 IGSF3O75054 1194 aa8.06□□□□□ -1.12
VCP-205ENST00000479300 GLRX3O76003 335 aaKnown RBP8.06□□□□□ -1.12
VCP-205ENST00000479300 PLCD1P51178 756 aa8.06□□□□□ -1.12
VCP-205ENST00000479300 CCNA1P78396 465 aa8.06□□□□□ -1.12
VCP-205ENST00000479300 RAB3GAP1Q15042 981 aa8.06□□□□□ -1.12
VCP-205ENST00000479300 C1orf53Q5VUE5 145 aa8.06□□□□□ -1.12
VCP-205ENST00000479300 OLFML2BQ68BL8 750 aa8.06□□□□□ -1.12
VCP-205ENST00000479300 MIGA1Q8NAN2 632 aa8.06□□□□□ -1.12
VCP-205ENST00000479300 FEZ1Q99689 392 aa8.06□□□□□ -1.12
VCP-205ENST00000479300 EHD4Q9H223 541 aa8.06□□□□□ -1.12
VCP-205ENST00000479300 CWC22Q9HCG8 908 aaKnown RBP8.06□□□□□ -1.12
VCP-205ENST00000479300 PRKAG2Q9UGJ0 569 aa8.06□□□□□ -1.12
VCP-205ENST00000479300 PARP14Q460N5 1801 aa8.06□□□□□ -1.12
VCP-205ENST00000479300 SMCHD1A6NHR9 2005 aa8.05□□□□□ -1.12
VCP-205ENST00000479300 KBTBD13C9JR72 458 aa8.05□□□□□ -1.12
VCP-205ENST00000479300 RIOK3O14730 519 aaKnown RBP8.05□□□□□ -1.12
VCP-205ENST00000479300 HLA-DOAP06340 250 aa8.05□□□□□ -1.12
VCP-205ENST00000479300 TAL1P17542 331 aaPredicted RBP8.05□□□□□ -1.12
VCP-205ENST00000479300 ERCC3P19447 782 aa8.05□□□□□ -1.12
VCP-205ENST00000479300 COL9A1P20849 921 aa8.05□□□□□ -1.12
VCP-205ENST00000479300 CYP7A1P22680 504 aa8.05□□□□□ -1.12
VCP-205ENST00000479300 GABPAQ06546 454 aa8.05□□□□□ -1.12
VCP-205ENST00000479300 SEPT2Q15019 361 aa8.05□□□□□ -1.12
VCP-205ENST00000479300 ABCB5Q2M3G0 1257 aa8.05□□□□□ -1.12
VCP-205ENST00000479300 CLEC10AQ8IUN9 316 aa8.05□□□□□ -1.12
VCP-205ENST00000479300 SIAH1Q8IUQ4 282 aa8.05□□□□□ -1.12
VCP-205ENST00000479300 ARRDC4Q8NCT1 418 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms