RNA–Protein interactions for RNA: ENST00000478776.1

VLDLR-204, Transcript of very low density lipoprotein receptor, humanhuman

TSL 3

Gene VLDLR, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-204ENST00000478776 SNX17Q15036 470 aa6.06□□□□□ -1.44
VLDLR-204ENST00000478776 NR0B2Q15466 257 aa6.06□□□□□ -1.44
VLDLR-204ENST00000478776 MCOLN1Q9GZU1 580 aa6.06□□□□□ -1.44
VLDLR-204ENST00000478776 ASCC2Q9H1I8 757 aaPredicted RBP6.06□□□□□ -1.44
VLDLR-204ENST00000478776 ZCCHC4Q9H5U6 513 aa6.06□□□□□ -1.44
VLDLR-204ENST00000478776 CNOT6Q9ULM6 557 aaKnown RBP6.06□□□□□ -1.44
VLDLR-204ENST00000478776 PEX10O60683 326 aa6.05□□□□□ -1.44
VLDLR-204ENST00000478776 SEMA7AO75326 666 aa6.05□□□□□ -1.44
VLDLR-204ENST00000478776 BMP7P18075 431 aa6.05□□□□□ -1.44
VLDLR-204ENST00000478776 EAPPQ56P03 285 aaPredicted RBP6.05□□□□□ -1.44
VLDLR-204ENST00000478776 BAHD1Q8TBE0 780 aaPredicted RBP6.05□□□□□ -1.44
VLDLR-204ENST00000478776 PPP1R13LQ8WUF5 828 aa6.05□□□□□ -1.44
VLDLR-204ENST00000478776 RNF141Q8WVD5 230 aa6.05□□□□□ -1.44
VLDLR-204ENST00000478776 INTS4Q96HW7 963 aaKnown RBP6.05□□□□□ -1.44
VLDLR-204ENST00000478776 TLR6Q9Y2C9 796 aa6.05□□□□□ -1.44
VLDLR-204ENST00000478776 YBX2Q9Y2T7 364 aaKnown RBP6.05□□□□□ -1.44
VLDLR-204ENST00000478776 CORINQ9Y5Q5 1042 aa6.05□□□□□ -1.44
VLDLR-204ENST00000478776 RFXAPO00287 272 aa6.04□□□□□ -1.44
VLDLR-204ENST00000478776 LRRN2O75325 713 aa6.04□□□□□ -1.44
VLDLR-204ENST00000478776 TAF1CQ15572 869 aaPredicted RBP6.04□□□□□ -1.44
VLDLR-204ENST00000478776 ZNF385BQ569K4 471 aa6.04□□□□□ -1.44
VLDLR-204ENST00000478776 MEI1Q5TIA1 1274 aa6.04□□□□□ -1.44
VLDLR-204ENST00000478776 CCDC84Q86UT8 332 aaPredicted RBP6.04□□□□□ -1.44
VLDLR-204ENST00000478776 ANKS4BQ8N8V4 417 aa6.04□□□□□ -1.44
VLDLR-204ENST00000478776 NOC4LQ9BVI4 516 aaKnown RBP6.04□□□□□ -1.44
VLDLR-204ENST00000478776 KRTAP4-11Q9BYQ6 195 aa6.04□□□□□ -1.44
VLDLR-204ENST00000478776 TEX51A0A1B0GUA7 166 aa6.03□□□□□ -1.44
VLDLR-204ENST00000478776 HOXA5P20719 270 aa6.03□□□□□ -1.44
VLDLR-204ENST00000478776 BUD31P41223 144 aaPredicted RBP6.03□□□□□ -1.44
VLDLR-204ENST00000478776 PSMD2Q13200 908 aa6.03□□□□□ -1.44
VLDLR-204ENST00000478776 TIGD5Q53EQ6 642 aa6.03□□□□□ -1.44
VLDLR-204ENST00000478776 TCERG1LQ5VWI1 586 aa6.03□□□□□ -1.44
VLDLR-204ENST00000478776 PHACTR4Q8IZ21 702 aa6.03□□□□□ -1.44
VLDLR-204ENST00000478776 RELTQ969Z4 430 aa6.03□□□□□ -1.44
VLDLR-204ENST00000478776 CCDC74BQ96LY2 380 aa6.03□□□□□ -1.44
VLDLR-204ENST00000478776 ASPNQ9BXN1 380 aa6.03□□□□□ -1.44
VLDLR-204ENST00000478776 ZNF552Q9H707 407 aaPredicted RBP6.03□□□□□ -1.44
VLDLR-204ENST00000478776 SP110Q9HB58 689 aa6.03□□□□□ -1.44
VLDLR-204ENST00000478776 PARD6AQ9NPB6 346 aa6.03□□□□□ -1.44
VLDLR-204ENST00000478776 KLHL3Q9UH77 587 aa6.03□□□□□ -1.44
VLDLR-204ENST00000478776 MYOCOSA0A1B0GUC4 107 aa6.02□□□□□ -1.45
VLDLR-204ENST00000478776 PATL2C9JE40 543 aaKnown RBP6.02□□□□□ -1.45
VLDLR-204ENST00000478776 TMEM201Q5SNT2 666 aa6.02□□□□□ -1.45
VLDLR-204ENST00000478776 TMEM151BQ8IW70 566 aa6.02□□□□□ -1.45
VLDLR-204ENST00000478776 KREMEN1Q96MU8 473 aa6.02□□□□□ -1.45
VLDLR-204ENST00000478776 KCTD3Q9Y597 815 aa6.02□□□□□ -1.45
VLDLR-204ENST00000478776 SSU72P8A0A1W2PR75 194 aa6.01□□□□□ -1.45
VLDLR-204ENST00000478776 OR14I1A6ND48 311 aa6.01□□□□□ -1.45
VLDLR-204ENST00000478776 GBP1P32455 592 aa6.01□□□□□ -1.45
VLDLR-204ENST00000478776 ST13P50502 369 aaKnown RBP6.01□□□□□ -1.45
VLDLR-204ENST00000478776 XPCQ01831 940 aaPredicted RBP6.01□□□□□ -1.45
VLDLR-204ENST00000478776 MLECQ14165 292 aa6.01□□□□□ -1.45
VLDLR-204ENST00000478776 SLC14A2Q15849 920 aa6.01□□□□□ -1.45
VLDLR-204ENST00000478776 BNC2Q6ZN30 1099 aaPredicted RBP6.01□□□□□ -1.45
VLDLR-204ENST00000478776 SLFN12Q8IYM2 578 aa6.01□□□□□ -1.45
VLDLR-204ENST00000478776 PHC3Q8NDX5 983 aa6.01□□□□□ -1.45
VLDLR-204ENST00000478776 REV1Q9UBZ9 1251 aa6.01□□□□□ -1.45
VLDLR-204ENST00000478776 ZMYM5Q9UJ78 669 aa6.01□□□□□ -1.45
VLDLR-204ENST00000478776 RBM47A0AV96 593 aaKnown RBP6□□□□□ -1.45
VLDLR-204ENST00000478776 ANKRD33BA6NCL7 494 aa6□□□□□ -1.45
VLDLR-204ENST00000478776 PSPNO60542 156 aa6□□□□□ -1.45
VLDLR-204ENST00000478776 CILPO75339 1184 aa6□□□□□ -1.45
VLDLR-204ENST00000478776 RPL10P27635 214 aaKnown RBP6□□□□□ -1.45
VLDLR-204ENST00000478776 TEKQ02763 1124 aa6□□□□□ -1.45
VLDLR-204ENST00000478776 LMNB2Q03252 620 aa6□□□□□ -1.45
VLDLR-204ENST00000478776 CAMK2GQ13555 558 aaPredicted RBP6□□□□□ -1.45
VLDLR-204ENST00000478776 ADGRF1Q5T601 910 aa6□□□□□ -1.45
VLDLR-204ENST00000478776 RELL1Q8IUW5 271 aa6□□□□□ -1.45
VLDLR-204ENST00000478776 SIRT2Q8IXJ6 389 aa6□□□□□ -1.45
VLDLR-204ENST00000478776 GATAD2BQ8WXI9 593 aa6□□□□□ -1.45
VLDLR-204ENST00000478776 SGPP1Q9BX95 441 aa6□□□□□ -1.45
VLDLR-204ENST00000478776 RNF19AQ9NV58 838 aa6□□□□□ -1.45
VLDLR-204ENST00000478776 PARP2Q9UGN5 583 aa6□□□□□ -1.45
VLDLR-204ENST00000478776 CHURC1-FNTBB4DL54 471 aa5.99□□□□□ -1.45
VLDLR-204ENST00000478776 F6X3S4 739 aa5.99□□□□□ -1.45
VLDLR-204ENST00000478776 ENOX1Q8TC92 643 aaKnown RBP5.99□□□□□ -1.45
VLDLR-204ENST00000478776 GZF1Q9H116 711 aaPredicted RBP5.99□□□□□ -1.45
VLDLR-204ENST00000478776 SIRT5Q9NXA8 310 aa5.99□□□□□ -1.45
VLDLR-204ENST00000478776 SHISA3A0PJX4 238 aa5.98□□□□□ -1.45
VLDLR-204ENST00000478776 GRIN3BO60391 1043 aa5.98□□□□□ -1.45
VLDLR-204ENST00000478776 HTR3BO95264 441 aa5.98□□□□□ -1.45
VLDLR-204ENST00000478776 F13A1P00488 732 aa5.98□□□□□ -1.45
VLDLR-204ENST00000478776 PF4P02776 101 aa5.98□□□□□ -1.45
VLDLR-204ENST00000478776 GBP2P32456 591 aaPredicted RBP5.98□□□□□ -1.45
VLDLR-204ENST00000478776 GALK1P51570 392 aa5.98□□□□□ -1.45
VLDLR-204ENST00000478776 SRSF3P84103 164 aaKnown RBP5.98□□□□□ -1.45
VLDLR-204ENST00000478776 NMIQ13287 307 aaPredicted RBP5.98□□□□□ -1.45
VLDLR-204ENST00000478776 RNF111Q6ZNA4 994 aa5.98□□□□□ -1.45
VLDLR-204ENST00000478776 WAPLQ7Z5K2 1190 aa5.98□□□□□ -1.45
VLDLR-204ENST00000478776 C20orf173Q96LM9 149 aa5.98□□□□□ -1.45
VLDLR-204ENST00000478776 KIF2CQ99661 725 aa5.98□□□□□ -1.45
VLDLR-204ENST00000478776 IRAK3Q9Y616 596 aa5.98□□□□□ -1.45
VLDLR-204ENST00000478776 USP31Q70CQ4 1352 aa5.97□□□□□ -1.45
VLDLR-204ENST00000478776 FAM221AA4D161 298 aa5.97□□□□□ -1.45
VLDLR-204ENST00000478776 SASH1O94885 1247 aa5.97□□□□□ -1.45
VLDLR-204ENST00000478776 PCBP3P57721 371 aaKnown RBP5.97□□□□□ -1.45
VLDLR-204ENST00000478776 RNF4P78317 190 aa5.97□□□□□ -1.45
VLDLR-204ENST00000478776 DAB2P98082 770 aa5.97□□□□□ -1.45
VLDLR-204ENST00000478776 PWP1Q13610 501 aa5.97□□□□□ -1.45
VLDLR-204ENST00000478776 SNAP47Q5SQN1 464 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms