RNA–Protein interactions for RNA: ENST00000478543.1

PDCD11-204, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 717 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-204ENST00000478543 CD2BP2O95400 341 aaKnown RBP13.75□□□□□ -0.21
PDCD11-204ENST00000478543 TSPY3P0CV98 308 aa13.75□□□□□ -0.21
PDCD11-204ENST00000478543 TSPY8P0CW00 308 aa13.75□□□□□ -0.21
PDCD11-204ENST00000478543 AKR1B1P15121 316 aa13.75□□□□□ -0.21
PDCD11-204ENST00000478543 ANP32AP39687 249 aaKnown RBP13.75□□□□□ -0.21
PDCD11-204ENST00000478543 AK2P54819 239 aa13.75□□□□□ -0.21
PDCD11-204ENST00000478543 EXOSC10Q01780 885 aaKnown RBP13.75□□□□□ -0.21
PDCD11-204ENST00000478543 METTL16Q86W50 562 aaKnown RBP13.75□□□□□ -0.21
PDCD11-204ENST00000478543 TTC14Q96N46 770 aa13.75□□□□□ -0.21
PDCD11-204ENST00000478543 LARP6Q9BRS8 491 aaKnown RBP13.75□□□□□ -0.21
PDCD11-204ENST00000478543 GPHNQ9NQX3 736 aaPredicted RBP13.75□□□□□ -0.21
PDCD11-204ENST00000478543 IFIT3O14879 490 aaKnown RBP13.74□□□□□ -0.21
PDCD11-204ENST00000478543 PPP1R12BO60237 982 aaPredicted RBP13.74□□□□□ -0.21
PDCD11-204ENST00000478543 NMT2O60551 498 aa13.74□□□□□ -0.21
PDCD11-204ENST00000478543 ECM2O94769 699 aaPredicted RBP13.74□□□□□ -0.21
PDCD11-204ENST00000478543 SHROOM1Q2M3G4 852 aaPredicted RBP13.74□□□□□ -0.21
PDCD11-204ENST00000478543 CERKLQ49MI3 558 aaPredicted RBP13.74□□□□□ -0.21
PDCD11-204ENST00000478543 TMEM67Q5HYA8 995 aa13.74□□□□□ -0.21
PDCD11-204ENST00000478543 DCAF15Q66K64 600 aa13.74□□□□□ -0.21
PDCD11-204ENST00000478543 TATDN1Q6P1N9 297 aa13.74□□□□□ -0.21
PDCD11-204ENST00000478543 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.74□□□□□ -0.21
PDCD11-204ENST00000478543 NBPF11Q86T75 865 aa13.74□□□□□ -0.21
PDCD11-204ENST00000478543 HOOK2Q96ED9 719 aa13.74□□□□□ -0.21
PDCD11-204ENST00000478543 UBAC1Q9BSL1 405 aa13.74□□□□□ -0.21
PDCD11-204ENST00000478543 TNKSO95271 1327 aa13.73□□□□□ -0.21
PDCD11-204ENST00000478543 WDR19Q8NEZ3 1342 aa13.73□□□□□ -0.21
PDCD11-204ENST00000478543 SH2B2O14492 632 aaPredicted RBP13.73□□□□□ -0.21
PDCD11-204ENST00000478543 TBC1D12O60347 775 aa13.73□□□□□ -0.21
PDCD11-204ENST00000478543 TOB2Q14106 344 aaPredicted RBP13.73□□□□□ -0.21
PDCD11-204ENST00000478543 RRP1BQ14684 758 aaKnown RBP13.73□□□□□ -0.21
PDCD11-204ENST00000478543 TAF1CQ15572 869 aaPredicted RBP13.73□□□□□ -0.21
PDCD11-204ENST00000478543 SUPT20HL1Q3ZLR7 823 aa13.73□□□□□ -0.21
PDCD11-204ENST00000478543 OTUD7BQ6GQQ9 843 aa13.73□□□□□ -0.21
PDCD11-204ENST00000478543 IQCA1Q86XH1 822 aa13.73□□□□□ -0.21
PDCD11-204ENST00000478543 ANKRD13AQ8IZ07 590 aa13.73□□□□□ -0.21
PDCD11-204ENST00000478543 DPF3Q92784 378 aa13.73□□□□□ -0.21
PDCD11-204ENST00000478543 BRF1Q92994 677 aa13.73□□□□□ -0.21
PDCD11-204ENST00000478543 ZSCAN10Q96SZ4 725 aaPredicted RBP13.73□□□□□ -0.21
PDCD11-204ENST00000478543 ZNF341Q9BYN7 854 aa13.73□□□□□ -0.21
PDCD11-204ENST00000478543 ERICH2A1L162 156 aa13.72□□□□□ -0.21
PDCD11-204ENST00000478543 UNCXA6NJT0 531 aa13.72□□□□□ -0.21
PDCD11-204ENST00000478543 JAG1P78504 1218 aa13.72□□□□□ -0.21
PDCD11-204ENST00000478543 APOBRQ0VD83 1088 aa13.72□□□□□ -0.21
PDCD11-204ENST00000478543 WTAPQ15007 396 aa13.72□□□□□ -0.21
PDCD11-204ENST00000478543 SART3Q15020 963 aaKnown RBP13.72□□□□□ -0.21
PDCD11-204ENST00000478543 ABCB5Q2M3G0 1257 aa13.72□□□□□ -0.21
PDCD11-204ENST00000478543 CLEC10AQ8IUN9 316 aa13.72□□□□□ -0.21
PDCD11-204ENST00000478543 HSCBQ8IWL3 235 aa13.72□□□□□ -0.21
PDCD11-204ENST00000478543 NEDD1Q8NHV4 660 aa13.72□□□□□ -0.21
PDCD11-204ENST00000478543 TMEM87BQ96K49 555 aa13.72□□□□□ -0.21
PDCD11-204ENST00000478543 CCDC17Q96LX7 622 aa13.72□□□□□ -0.21
PDCD11-204ENST00000478543 SENP2Q9HC62 589 aa13.72□□□□□ -0.21
PDCD11-204ENST00000478543 TAOK2Q9UL54 1235 aa13.72□□□□□ -0.21
PDCD11-204ENST00000478543 NAP1L2Q9ULW6 460 aaPredicted RBP13.72□□□□□ -0.21
PDCD11-204ENST00000478543 PLIN4Q96Q06 1357 aa13.71□□□□□ -0.21
PDCD11-204ENST00000478543 CCL15-CCL14A0A0B4J2E2 113 aa13.71□□□□□ -0.21
PDCD11-204ENST00000478543 GH2P01242 217 aa13.71□□□□□ -0.21
PDCD11-204ENST00000478543 IREB2P48200 963 aaKnown RBP13.71□□□□□ -0.21
PDCD11-204ENST00000478543 LACTBP83111 547 aaPredicted RBP13.71□□□□□ -0.21
PDCD11-204ENST00000478543 MAP3K10Q02779 954 aa13.71□□□□□ -0.21
PDCD11-204ENST00000478543 VGLL4Q14135 290 aa13.71□□□□□ -0.21
PDCD11-204ENST00000478543 ANKRD1Q15327 319 aa13.71□□□□□ -0.21
PDCD11-204ENST00000478543 CCL15Q16663 113 aa13.71□□□□□ -0.21
PDCD11-204ENST00000478543 NFXL1Q6ZNB6 911 aa13.71□□□□□ -0.21
PDCD11-204ENST00000478543 ENAHQ8N8S7 591 aaPredicted RBP13.71□□□□□ -0.21
PDCD11-204ENST00000478543 IGDCC4Q8TDY8 1250 aa13.71□□□□□ -0.21
PDCD11-204ENST00000478543 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.71□□□□□ -0.21
PDCD11-204ENST00000478543 ALDH8A1Q9H2A2 487 aaPredicted RBP13.71□□□□□ -0.21
PDCD11-204ENST00000478543 LY9Q9HBG7 655 aa13.71□□□□□ -0.21
PDCD11-204ENST00000478543 CABP5Q9NP86 173 aa13.71□□□□□ -0.21
PDCD11-204ENST00000478543 IL17RBQ9NRM6 502 aa13.71□□□□□ -0.21
PDCD11-204ENST00000478543 MUC3AQ02505 3323 aa13.71□□□□□ -0.21
PDCD11-204ENST00000478543 ALPK3Q96L96 1907 aa13.7□□□□□ -0.22
PDCD11-204ENST00000478543 KLF18A0A0U1RQI7 1052 aa13.7□□□□□ -0.22
PDCD11-204ENST00000478543 PHF20L1A8MW92 1017 aa13.7□□□□□ -0.22
PDCD11-204ENST00000478543 NT5C2P49902 561 aa13.7□□□□□ -0.22
PDCD11-204ENST00000478543 ATP2B2Q01814 1243 aa13.7□□□□□ -0.22
PDCD11-204ENST00000478543 SEPT2Q15019 361 aa13.7□□□□□ -0.22
PDCD11-204ENST00000478543 RAB3GAP1Q15042 981 aa13.7□□□□□ -0.22
PDCD11-204ENST00000478543 SEC23AQ15436 765 aa13.7□□□□□ -0.22
PDCD11-204ENST00000478543 IFIT1BQ5T764 474 aaKnown RBP13.7□□□□□ -0.22
PDCD11-204ENST00000478543 RAB11FIP4Q86YS3 637 aa13.7□□□□□ -0.22
PDCD11-204ENST00000478543 SNX21Q969T3 373 aa13.7□□□□□ -0.22
PDCD11-204ENST00000478543 CEP95Q96GE4 821 aa13.7□□□□□ -0.22
PDCD11-204ENST00000478543 WRNIP1Q96S55 665 aa13.7□□□□□ -0.22
PDCD11-204ENST00000478543 TBC1D2Q9BYX2 928 aa13.7□□□□□ -0.22
PDCD11-204ENST00000478543 ZFYVE28Q9HCC9 887 aa13.7□□□□□ -0.22
PDCD11-204ENST00000478543 TCP11L1Q9NUJ3 509 aa13.7□□□□□ -0.22
PDCD11-204ENST00000478543 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.7□□□□□ -0.22
PDCD11-204ENST00000478543 ZBTB21Q9ULJ3 1066 aa13.7□□□□□ -0.22
PDCD11-204ENST00000478543 GREB1LQ9C091 1923 aaPredicted RBP13.7□□□□□ -0.22
PDCD11-204ENST00000478543 PRUNE2Q8WUY3 3088 aa13.7□□□□□ -0.22
PDCD11-204ENST00000478543 IGKV6D-41A0A0C4DH26 115 aa13.69□□□□□ -0.22
PDCD11-204ENST00000478543 CCDC69A6NI79 296 aa13.69□□□□□ -0.22
PDCD11-204ENST00000478543 LARGE1O95461 756 aa13.69□□□□□ -0.22
PDCD11-204ENST00000478543 INPP5BP32019 993 aa13.69□□□□□ -0.22
PDCD11-204ENST00000478543 CAP2P40123 477 aa13.69□□□□□ -0.22
PDCD11-204ENST00000478543 STK3Q13188 491 aa13.69□□□□□ -0.22
PDCD11-204ENST00000478543 CCDC178Q5BJE1 867 aa13.69□□□□□ -0.22
PDCD11-204ENST00000478543 TMEM179Q6ZVK1 233 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms