RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 PLCG1P19174 1290 aa4.43□□□□□ -1.7
FNDC3B-209ENST00000478016 SLBPQ14493 270 aaKnown RBP eCLIP4.43□□□□□ -1.7
FNDC3B-209ENST00000478016 NKG7Q16617 165 aa4.43□□□□□ -1.7
FNDC3B-209ENST00000478016 SEZ6Q53EL9 994 aa4.43□□□□□ -1.7
FNDC3B-209ENST00000478016 ZNF765Q7L2R6 523 aa4.43□□□□□ -1.7
FNDC3B-209ENST00000478016 C11orf96Q7Z7L8 435 aa4.43□□□□□ -1.7
FNDC3B-209ENST00000478016 ANKRD23Q86SG2 305 aa4.43□□□□□ -1.7
FNDC3B-209ENST00000478016 MRPL41Q8IXM3 137 aaKnown RBP4.43□□□□□ -1.7
FNDC3B-209ENST00000478016 SHISA5Q8N114 240 aa4.43□□□□□ -1.7
FNDC3B-209ENST00000478016 TOP6BLQ8N6T0 577 aa4.43□□□□□ -1.7
FNDC3B-209ENST00000478016 MFSD2AQ8NA29 543 aa4.43□□□□□ -1.7
FNDC3B-209ENST00000478016 LSM14AQ8ND56 463 aaKnown RBP4.43□□□□□ -1.7
FNDC3B-209ENST00000478016 EAF1Q96JC9 268 aaPredicted RBP4.43□□□□□ -1.7
FNDC3B-209ENST00000478016 FOXQ1Q9C009 403 aa4.43□□□□□ -1.7
FNDC3B-209ENST00000478016 TGIF2Q9GZN2 237 aa4.43□□□□□ -1.7
FNDC3B-209ENST00000478016 IRF2BPLQ9H1B7 796 aa4.43□□□□□ -1.7
FNDC3B-209ENST00000478016 CCSER2Q9H7U1 834 aa4.43□□□□□ -1.7
FNDC3B-209ENST00000478016 BRMS1Q9HCU9 246 aa4.43□□□□□ -1.7
FNDC3B-209ENST00000478016 PIM2Q9P1W9 311 aa4.43□□□□□ -1.7
FNDC3B-209ENST00000478016 PRDM4Q9UKN5 801 aa4.43□□□□□ -1.7
FNDC3B-209ENST00000478016 POLR3KQ9Y2Y1 108 aaPredicted RBP4.43□□□□□ -1.7
FNDC3B-209ENST00000478016 CORINQ9Y5Q5 1042 aa4.43□□□□□ -1.7
FNDC3B-209ENST00000478016 PRR19A6NJB7 356 aa4.42□□□□□ -1.7
FNDC3B-209ENST00000478016 RRP9O43818 475 aaKnown RBP4.42□□□□□ -1.7
FNDC3B-209ENST00000478016 ZNF500O60304 480 aaPredicted RBP4.42□□□□□ -1.7
FNDC3B-209ENST00000478016 TGFB1P01137 390 aa4.42□□□□□ -1.7
FNDC3B-209ENST00000478016 GRIK1P39086 918 aa4.42□□□□□ -1.7
FNDC3B-209ENST00000478016 ZNF165P49910 485 aa4.42□□□□□ -1.7
FNDC3B-209ENST00000478016 YARSP54577 528 aaKnown RBP4.42□□□□□ -1.7
FNDC3B-209ENST00000478016 POU5F1Q01860 360 aaKnown RBP4.42□□□□□ -1.7
FNDC3B-209ENST00000478016 MTA1Q13330 715 aa4.42□□□□□ -1.7
FNDC3B-209ENST00000478016 MLECQ14165 292 aa4.42□□□□□ -1.7
FNDC3B-209ENST00000478016 TBC1D10BQ4KMP7 808 aaPredicted RBP4.42□□□□□ -1.7
FNDC3B-209ENST00000478016 TMEM201Q5SNT2 666 aa4.42□□□□□ -1.7
FNDC3B-209ENST00000478016 ZMYM1Q5SVZ6 1142 aa4.42□□□□□ -1.7
FNDC3B-209ENST00000478016 PRAMEF13Q5VWM6 474 aa4.42□□□□□ -1.7
FNDC3B-209ENST00000478016 ZKSCAN2Q63HK3 967 aa4.42□□□□□ -1.7
FNDC3B-209ENST00000478016 SLC6A19Q695T7 634 aa4.42□□□□□ -1.7
FNDC3B-209ENST00000478016 MCATQ8IVS2 390 aaKnown RBP4.42□□□□□ -1.7
FNDC3B-209ENST00000478016 SLITRK4Q8IW52 837 aa4.42□□□□□ -1.7
FNDC3B-209ENST00000478016 CCAR1Q8IX12 1150 aaKnown RBP4.42□□□□□ -1.7
FNDC3B-209ENST00000478016 REXO1Q8N1G1 1221 aaKnown RBP4.42□□□□□ -1.7
FNDC3B-209ENST00000478016 NKD1Q969G9 470 aa4.42□□□□□ -1.7
FNDC3B-209ENST00000478016 ACSF2Q96CM8 615 aaPredicted RBP4.42□□□□□ -1.7
FNDC3B-209ENST00000478016 TMEM87BQ96K49 555 aa4.42□□□□□ -1.7
FNDC3B-209ENST00000478016 DUSP23Q9BVJ7 150 aa4.42□□□□□ -1.7
FNDC3B-209ENST00000478016 REV1Q9UBZ9 1251 aa4.42□□□□□ -1.7
FNDC3B-209ENST00000478016 TJP2Q9UDY2 1190 aa4.42□□□□□ -1.7
FNDC3B-209ENST00000478016 NRBP1Q9UHY1 535 aa4.42□□□□□ -1.7
FNDC3B-209ENST00000478016 FBXO9Q9UK97 447 aaPredicted RBP4.42□□□□□ -1.7
FNDC3B-209ENST00000478016 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.42□□□□□ -1.7
FNDC3B-209ENST00000478016 FRMD4BQ9Y2L6 1034 aa4.42□□□□□ -1.7
FNDC3B-209ENST00000478016 PCDHB14Q9Y5E9 798 aa4.42□□□□□ -1.7
FNDC3B-209ENST00000478016 hCG_2014768A0A024R1R8 64 aa4.41□□□□□ -1.7
FNDC3B-209ENST00000478016 GOLGA6CA6NDK9 693 aa4.41□□□□□ -1.7
FNDC3B-209ENST00000478016 GOLGA6BA6NDN3 693 aa4.41□□□□□ -1.7
FNDC3B-209ENST00000478016 CYP26A1O43174 497 aa4.41□□□□□ -1.7
FNDC3B-209ENST00000478016 COBLO75128 1261 aa4.41□□□□□ -1.7
FNDC3B-209ENST00000478016 LEFTY1O75610 366 aa4.41□□□□□ -1.7
FNDC3B-209ENST00000478016 ATE1O95260 518 aa4.41□□□□□ -1.7
FNDC3B-209ENST00000478016 FAM200BP0CF97 657 aa4.41□□□□□ -1.7
FNDC3B-209ENST00000478016 GOLGA6DP0CG33 693 aa4.41□□□□□ -1.7
FNDC3B-209ENST00000478016 FOSL1P15407 271 aa4.41□□□□□ -1.7
FNDC3B-209ENST00000478016 SCP2P22307 547 aa4.41□□□□□ -1.7
FNDC3B-209ENST00000478016 ERCC5P28715 1186 aaPredicted RBP4.41□□□□□ -1.7
FNDC3B-209ENST00000478016 MCM4P33991 863 aa4.41□□□□□ -1.7
FNDC3B-209ENST00000478016 CALD1Q05682 793 aaKnown RBP4.41□□□□□ -1.7
FNDC3B-209ENST00000478016 RAD51AP2Q09MP3 1159 aa4.41□□□□□ -1.7
FNDC3B-209ENST00000478016 PAK2Q13177 524 aa4.41□□□□□ -1.7
FNDC3B-209ENST00000478016 SDE2Q6IQ49 451 aa4.41□□□□□ -1.7
FNDC3B-209ENST00000478016 INTS5Q6P9B9 1019 aaKnown RBP4.41□□□□□ -1.7
FNDC3B-209ENST00000478016 FAM13CQ8NE31 585 aa4.41□□□□□ -1.7
FNDC3B-209ENST00000478016 GPRASP2Q96D09 838 aa4.41□□□□□ -1.7
FNDC3B-209ENST00000478016 MIPEPQ99797 713 aa4.41□□□□□ -1.7
FNDC3B-209ENST00000478016 EHMT1Q9H9B1 1298 aa4.41□□□□□ -1.7
FNDC3B-209ENST00000478016 GOLGA6AQ9NYA3 693 aa4.41□□□□□ -1.7
FNDC3B-209ENST00000478016 SYNPO2Q9UMS6 1093 aa4.41□□□□□ -1.7
FNDC3B-209ENST00000478016 TBX22Q9Y458 520 aa4.41□□□□□ -1.7
FNDC3B-209ENST00000478016 BICDL2A1A5D9 508 aa4.4□□□□□ -1.71
FNDC3B-209ENST00000478016 TCERG1O14776 1098 aaKnown RBP4.4□□□□□ -1.71
FNDC3B-209ENST00000478016 SLITRK5O94991 958 aa4.4□□□□□ -1.71
FNDC3B-209ENST00000478016 HSP90AA1P07900 732 aaKnown RBP4.4□□□□□ -1.71
FNDC3B-209ENST00000478016 VDRP11473 427 aa4.4□□□□□ -1.71
FNDC3B-209ENST00000478016 GJA8P48165 433 aa4.4□□□□□ -1.71
FNDC3B-209ENST00000478016 COL9A2Q14055 689 aaPredicted RBP4.4□□□□□ -1.71
FNDC3B-209ENST00000478016 ICE2Q659A1 982 aa4.4□□□□□ -1.71
FNDC3B-209ENST00000478016 ZNF746Q6NUN9 644 aaPredicted RBP4.4□□□□□ -1.71
FNDC3B-209ENST00000478016 LETMD1Q6P1Q0 360 aa4.4□□□□□ -1.71
FNDC3B-209ENST00000478016 GK5Q6ZS86 529 aa4.4□□□□□ -1.71
FNDC3B-209ENST00000478016 SLFN12Q8IYM2 578 aa4.4□□□□□ -1.71
FNDC3B-209ENST00000478016 XAGE3Q8WTP9 111 aa4.4□□□□□ -1.71
FNDC3B-209ENST00000478016 DPH2Q9BQC3 489 aaPredicted RBP4.4□□□□□ -1.71
FNDC3B-209ENST00000478016 LRRC4CQ9HCJ2 640 aa4.4□□□□□ -1.71
FNDC3B-209ENST00000478016 GMIPQ9P107 970 aa4.4□□□□□ -1.71
FNDC3B-209ENST00000478016 KLHL3Q9UH77 587 aa4.4□□□□□ -1.71
FNDC3B-209ENST00000478016 GTF2IRD1Q9UHL9 959 aa4.4□□□□□ -1.71
FNDC3B-209ENST00000478016 TPX2Q9ULW0 747 aaKnown RBP4.4□□□□□ -1.71
FNDC3B-209ENST00000478016 INPP5FQ9Y2H2 1132 aa4.4□□□□□ -1.71
FNDC3B-209ENST00000478016 CENPJQ9HC77 1338 aaPredicted RBP4.4□□□□□ -1.71
FNDC3B-209ENST00000478016 DHX16O60231 1041 aaKnown RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms