RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 SLC5A4Q9NY91 659 aa8.12□□□□□ -1.11
RTFDC1-206ENST00000477485 DBNLQ9UJU6 430 aaKnown RBP8.12□□□□□ -1.11
RTFDC1-206ENST00000477485 DNAH12Q6ZR08 3092 aa8.11□□□□□ -1.11
RTFDC1-206ENST00000477485 MAGEB6P1A0A0J9YX57 407 aa8.11□□□□□ -1.11
RTFDC1-206ENST00000477485 POTEB2H3BUK9 544 aa8.11□□□□□ -1.11
RTFDC1-206ENST00000477485 CYBAP13498 195 aa8.11□□□□□ -1.11
RTFDC1-206ENST00000477485 FOSL2P15408 326 aa8.11□□□□□ -1.11
RTFDC1-206ENST00000477485 ADCYAP1R1P41586 468 aa8.11□□□□□ -1.11
RTFDC1-206ENST00000477485 PLCD1P51178 756 aa8.11□□□□□ -1.11
RTFDC1-206ENST00000477485 SEPT2Q15019 361 aa8.11□□□□□ -1.11
RTFDC1-206ENST00000477485 SHHQ15465 462 aa8.11□□□□□ -1.11
RTFDC1-206ENST00000477485 PRAMEF19Q5SWL8 479 aa8.11□□□□□ -1.11
RTFDC1-206ENST00000477485 C9orf50Q5SZB4 431 aa8.11□□□□□ -1.11
RTFDC1-206ENST00000477485 FAM109BQ6ICB4 259 aaPredicted RBP8.11□□□□□ -1.11
RTFDC1-206ENST00000477485 TATDN1Q6P1N9 297 aa8.11□□□□□ -1.11
RTFDC1-206ENST00000477485 SLC39A5Q6ZMH5 540 aa8.11□□□□□ -1.11
RTFDC1-206ENST00000477485 AACSQ86V21 672 aa8.11□□□□□ -1.11
RTFDC1-206ENST00000477485 METTL16Q86W50 562 aaKnown RBP8.11□□□□□ -1.11
RTFDC1-206ENST00000477485 CERS3Q8IU89 383 aa8.11□□□□□ -1.11
RTFDC1-206ENST00000477485 ITPRIPQ8IWB1 547 aa8.11□□□□□ -1.11
RTFDC1-206ENST00000477485 TRPV1Q8NER1 839 aa8.11□□□□□ -1.11
RTFDC1-206ENST00000477485 MYLIPQ8WY64 445 aa8.11□□□□□ -1.11
RTFDC1-206ENST00000477485 CDX2Q99626 313 aaPredicted RBP8.11□□□□□ -1.11
RTFDC1-206ENST00000477485 MOV10L1Q9BXT6 1211 aaKnown RBP8.11□□□□□ -1.11
RTFDC1-206ENST00000477485 EHD4Q9H223 541 aa8.11□□□□□ -1.11
RTFDC1-206ENST00000477485 MCM9Q9NXL9 1143 aa8.11□□□□□ -1.11
RTFDC1-206ENST00000477485 UNC80Q8N2C7 3258 aa8.11□□□□□ -1.11
RTFDC1-206ENST00000477485 MYH4Q9Y623 1939 aa8.11□□□□□ -1.11
RTFDC1-206ENST00000477485 GBF1Q92538 1859 aa8.11□□□□□ -1.11
RTFDC1-206ENST00000477485 MCM3APO60318 1980 aa8.1□□□□□ -1.11
RTFDC1-206ENST00000477485 APBB1O00213 710 aa8.1□□□□□ -1.11
RTFDC1-206ENST00000477485 FLOT1O75955 427 aa8.1□□□□□ -1.11
RTFDC1-206ENST00000477485 ERCC3P19447 782 aa8.1□□□□□ -1.11
RTFDC1-206ENST00000477485 SHMT1P34896 483 aa8.1□□□□□ -1.11
RTFDC1-206ENST00000477485 ATP8B2P98198 1209 aa8.1□□□□□ -1.11
RTFDC1-206ENST00000477485 POLA2Q14181 598 aa8.1□□□□□ -1.11
RTFDC1-206ENST00000477485 COG2Q14746 738 aa8.1□□□□□ -1.11
RTFDC1-206ENST00000477485 FAM47AQ5JRC9 791 aa8.1□□□□□ -1.11
RTFDC1-206ENST00000477485 ZKSCAN2Q63HK3 967 aa8.1□□□□□ -1.11
RTFDC1-206ENST00000477485 SPICE1Q8N0Z3 855 aa8.1□□□□□ -1.11
RTFDC1-206ENST00000477485 ZNF512BQ96KM6 892 aaPredicted RBP8.1□□□□□ -1.11
RTFDC1-206ENST00000477485 RNPC3Q96LT9 517 aaKnown RBP8.1□□□□□ -1.11
RTFDC1-206ENST00000477485 CRNKL1Q9BZJ0 848 aaKnown RBP8.1□□□□□ -1.11
RTFDC1-206ENST00000477485 SPATC1LQ9H0A9 340 aa8.1□□□□□ -1.11
RTFDC1-206ENST00000477485 ANTXR1Q9H6X2 564 aa8.1□□□□□ -1.11
RTFDC1-206ENST00000477485 ARHGEF10LQ9HCE6 1279 aa8.1□□□□□ -1.11
RTFDC1-206ENST00000477485 HOXC10Q9NYD6 342 aa8.1□□□□□ -1.11
RTFDC1-206ENST00000477485 SEPT4O43236 478 aa8.09□□□□□ -1.11
RTFDC1-206ENST00000477485 STRNO43815 780 aa8.09□□□□□ -1.11
RTFDC1-206ENST00000477485 PQBP1O60828 265 aaKnown RBP8.09□□□□□ -1.11
RTFDC1-206ENST00000477485 HOXC6P09630 235 aa8.09□□□□□ -1.11
RTFDC1-206ENST00000477485 RAG1P15918 1043 aa8.09□□□□□ -1.11
RTFDC1-206ENST00000477485 SLC4A3P48751 1232 aa8.09□□□□□ -1.11
RTFDC1-206ENST00000477485 EVX2Q03828 476 aa8.09□□□□□ -1.11
RTFDC1-206ENST00000477485 OLFML2BQ68BL8 750 aa8.09□□□□□ -1.11
RTFDC1-206ENST00000477485 LBX2Q6XYB7 198 aa8.09□□□□□ -1.11
RTFDC1-206ENST00000477485 SH3RF1Q7Z6J0 888 aa8.09□□□□□ -1.11
RTFDC1-206ENST00000477485 CLEC10AQ8IUN9 316 aa8.09□□□□□ -1.11
RTFDC1-206ENST00000477485 SSH3Q8TE77 659 aa8.09□□□□□ -1.11
RTFDC1-206ENST00000477485 SDR42E1Q8WUS8 393 aa8.09□□□□□ -1.11
RTFDC1-206ENST00000477485 EAF2Q96CJ1 260 aaPredicted RBP8.09□□□□□ -1.11
RTFDC1-206ENST00000477485 DNAJC2Q99543 621 aaKnown RBP8.09□□□□□ -1.11
RTFDC1-206ENST00000477485 SEMA6BQ9H3T3 888 aa8.09□□□□□ -1.11
RTFDC1-206ENST00000477485 XPNPEP3Q9NQH7 507 aa8.09□□□□□ -1.11
RTFDC1-206ENST00000477485 PDLIM7Q9NR12 457 aa8.09□□□□□ -1.11
RTFDC1-206ENST00000477485 EXOC6BQ9Y2D4 811 aa8.09□□□□□ -1.11
RTFDC1-206ENST00000477485 A0A0C4DFX4 3053 aa8.09□□□□□ -1.11
RTFDC1-206ENST00000477485 A0A1W2PRG0 241 aa8.08□□□□□ -1.12
RTFDC1-206ENST00000477485 IGSF3O75054 1194 aa8.08□□□□□ -1.12
RTFDC1-206ENST00000477485 COBLO75128 1261 aa8.08□□□□□ -1.12
RTFDC1-206ENST00000477485 PGK1P00558 417 aa8.08□□□□□ -1.12
RTFDC1-206ENST00000477485 CYP2D6P10635 497 aa8.08□□□□□ -1.12
RTFDC1-206ENST00000477485 RARBP10826 455 aa8.08□□□□□ -1.12
RTFDC1-206ENST00000477485 FCER1AP12319 257 aa8.08□□□□□ -1.12
RTFDC1-206ENST00000477485 GUCY1A2P33402 732 aa8.08□□□□□ -1.12
RTFDC1-206ENST00000477485 TLE2Q04725 743 aa8.08□□□□□ -1.12
RTFDC1-206ENST00000477485 ICA1Q05084 483 aa8.08□□□□□ -1.12
RTFDC1-206ENST00000477485 LRRC41Q15345 812 aa8.08□□□□□ -1.12
RTFDC1-206ENST00000477485 TTF1Q15361 905 aaPredicted RBP8.08□□□□□ -1.12
RTFDC1-206ENST00000477485 SLC9C2Q5TAH2 1124 aa8.08□□□□□ -1.12
RTFDC1-206ENST00000477485 RNF180Q86T96 592 aa8.08□□□□□ -1.12
RTFDC1-206ENST00000477485 AMOTL1Q8IY63 956 aa8.08□□□□□ -1.12
RTFDC1-206ENST00000477485 SLC44A5Q8NCS7 719 aa8.08□□□□□ -1.12
RTFDC1-206ENST00000477485 ATG4CQ96DT6 458 aa8.08□□□□□ -1.12
RTFDC1-206ENST00000477485 DYNLL2Q96FJ2 89 aa8.08□□□□□ -1.12
RTFDC1-206ENST00000477485 MAML3Q96JK9 1138 aa8.08□□□□□ -1.12
RTFDC1-206ENST00000477485 MMP19Q99542 508 aa8.08□□□□□ -1.12
RTFDC1-206ENST00000477485 MROH8Q9H579 483 aa8.08□□□□□ -1.12
RTFDC1-206ENST00000477485 SH2D4AQ9H788 454 aa8.08□□□□□ -1.12
RTFDC1-206ENST00000477485 IL1RAPL2Q9NP60 686 aa8.08□□□□□ -1.12
RTFDC1-206ENST00000477485 ZNF532Q9HCE3 1301 aa8.07□□□□□ -1.12
RTFDC1-206ENST00000477485 TRIM43BA6NCK2 446 aa8.07□□□□□ -1.12
RTFDC1-206ENST00000477485 GOLIM4O00461 696 aa8.07□□□□□ -1.12
RTFDC1-206ENST00000477485 PGK2P07205 417 aa8.07□□□□□ -1.12
RTFDC1-206ENST00000477485 CLTBP09497 229 aa8.07□□□□□ -1.12
RTFDC1-206ENST00000477485 PDE6AP16499 860 aa8.07□□□□□ -1.12
RTFDC1-206ENST00000477485 DSG3P32926 999 aa8.07□□□□□ -1.12
RTFDC1-206ENST00000477485 SMAD3P84022 425 aaKnown RBP8.07□□□□□ -1.12
RTFDC1-206ENST00000477485 FPGSQ05932 587 aa8.07□□□□□ -1.12
RTFDC1-206ENST00000477485 KCTD2Q14681 263 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms