RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 MFSD14CQ5VZR4 134 aa13.71□□□□□ -0.21
HDLBP-236ENST00000477477 LHX8Q68G74 356 aa13.71□□□□□ -0.21
HDLBP-236ENST00000477477 GDF15Q99988 308 aa13.71□□□□□ -0.21
HDLBP-236ENST00000477477 FLRT1Q9NZU1 646 aa13.71□□□□□ -0.21
HDLBP-236ENST00000477477 ZMYND8Q9ULU4 1186 aaPredicted RBP13.71□□□□□ -0.21
HDLBP-236ENST00000477477 IVNS1ABPQ9Y6Y0 642 aa13.71□□□□□ -0.21
HDLBP-236ENST00000477477 COL6A1P12109 1028 aa13.7□□□□□ -0.22
HDLBP-236ENST00000477477 AKR1B1P15121 316 aa13.7□□□□□ -0.22
HDLBP-236ENST00000477477 ICA1Q05084 483 aa13.7□□□□□ -0.22
HDLBP-236ENST00000477477 COG2Q14746 738 aa13.7□□□□□ -0.22
HDLBP-236ENST00000477477 KIAA1755Q5JYT7 1200 aa13.7□□□□□ -0.22
HDLBP-236ENST00000477477 C20orf194Q5TEA3 1177 aa13.7□□□□□ -0.22
HDLBP-236ENST00000477477 CLEC10AQ8IUN9 316 aa13.7□□□□□ -0.22
HDLBP-236ENST00000477477 NPLOC4Q8TAT6 608 aa13.7□□□□□ -0.22
HDLBP-236ENST00000477477 LPAR1Q92633 364 aa13.7□□□□□ -0.22
HDLBP-236ENST00000477477 MOV10L1Q9BXT6 1211 aaKnown RBP13.7□□□□□ -0.22
HDLBP-236ENST00000477477 LRRCC1Q9C099 1032 aa13.7□□□□□ -0.22
HDLBP-236ENST00000477477 TANGO6Q9C0B7 1094 aa13.7□□□□□ -0.22
HDLBP-236ENST00000477477 ARHGEF10LQ9HCE6 1279 aa13.7□□□□□ -0.22
HDLBP-236ENST00000477477 HOXC10Q9NYD6 342 aa13.7□□□□□ -0.22
HDLBP-236ENST00000477477 LAMA3Q16787 3333 aa13.69□□□□□ -0.22
HDLBP-236ENST00000477477 CYP2D7A0A087X1C5 515 aa13.69□□□□□ -0.22
HDLBP-236ENST00000477477 SMIM22K7EJ46 135 aa13.69□□□□□ -0.22
HDLBP-236ENST00000477477 C12orf60Q5U649 245 aa13.69□□□□□ -0.22
HDLBP-236ENST00000477477 SIAH1Q8IUQ4 282 aa13.69□□□□□ -0.22
HDLBP-236ENST00000477477 AMOTL1Q8IY63 956 aa13.69□□□□□ -0.22
HDLBP-236ENST00000477477 CCDC17Q96LX7 622 aa13.69□□□□□ -0.22
HDLBP-236ENST00000477477 SPATC1LQ9H0A9 340 aa13.69□□□□□ -0.22
HDLBP-236ENST00000477477 SH2D4AQ9H788 454 aa13.69□□□□□ -0.22
HDLBP-236ENST00000477477 TMX2Q9Y320 296 aa13.69□□□□□ -0.22
HDLBP-236ENST00000477477 USP17L12C9JPN9 530 aa13.68□□□□□ -0.22
HDLBP-236ENST00000477477 USP17L21D6R901 530 aa13.68□□□□□ -0.22
HDLBP-236ENST00000477477 SMARCA5O60264 1052 aaPredicted RBP13.68□□□□□ -0.22
HDLBP-236ENST00000477477 IGHA2P01877 340 aa13.68□□□□□ -0.22
HDLBP-236ENST00000477477 SYN1P17600 705 aa13.68□□□□□ -0.22
HDLBP-236ENST00000477477 DSG3P32926 999 aa13.68□□□□□ -0.22
HDLBP-236ENST00000477477 BMP8BP34820 402 aa13.68□□□□□ -0.22
HDLBP-236ENST00000477477 CDK8P49336 464 aa13.68□□□□□ -0.22
HDLBP-236ENST00000477477 ATP2B2Q01814 1243 aa13.68□□□□□ -0.22
HDLBP-236ENST00000477477 ZSCAN25Q6NSZ9 544 aa13.68□□□□□ -0.22
HDLBP-236ENST00000477477 C16orf86Q6ZW13 317 aa13.68□□□□□ -0.22
HDLBP-236ENST00000477477 MB21D1Q8N884 522 aa13.68□□□□□ -0.22
HDLBP-236ENST00000477477 SHCBP1Q8NEM2 672 aa13.68□□□□□ -0.22
HDLBP-236ENST00000477477 DDRGK1Q96HY6 314 aa13.68□□□□□ -0.22
HDLBP-236ENST00000477477 PUS7LQ9H0K6 701 aaKnown RBP13.68□□□□□ -0.22
HDLBP-236ENST00000477477 VCPKMTQ9H867 229 aa13.68□□□□□ -0.22
HDLBP-236ENST00000477477 DDX20Q9UHI6 824 aaKnown RBP13.68□□□□□ -0.22
HDLBP-236ENST00000477477 SLC4A4Q9Y6R1 1079 aa13.68□□□□□ -0.22
HDLBP-236ENST00000477477 A0A0G2JMZ2 1700 aa13.67□□□□□ -0.22
HDLBP-236ENST00000477477 SOX1O00570 391 aaPredicted RBP13.67□□□□□ -0.22
HDLBP-236ENST00000477477 STRNO43815 780 aa13.67□□□□□ -0.22
HDLBP-236ENST00000477477 MSCO60682 206 aa13.67□□□□□ -0.22
HDLBP-236ENST00000477477 FLOT1O75955 427 aa13.67□□□□□ -0.22
HDLBP-236ENST00000477477 ERCC3P19447 782 aa13.67□□□□□ -0.22
HDLBP-236ENST00000477477 ADORA2AP29274 412 aa13.67□□□□□ -0.22
HDLBP-236ENST00000477477 CYP2C19P33261 490 aa13.67□□□□□ -0.22
HDLBP-236ENST00000477477 SPICE1Q8N0Z3 855 aa13.67□□□□□ -0.22
HDLBP-236ENST00000477477 ATG4CQ96DT6 458 aa13.67□□□□□ -0.22
HDLBP-236ENST00000477477 ZNF236Q9UL36 1845 aa13.67□□□□□ -0.22
HDLBP-236ENST00000477477 WDR46O15213 610 aaKnown RBP13.66□□□□□ -0.22
HDLBP-236ENST00000477477 CYBAP13498 195 aa13.66□□□□□ -0.22
HDLBP-236ENST00000477477 CNGA1P29973 690 aa13.66□□□□□ -0.22
HDLBP-236ENST00000477477 MAGEA10P43363 369 aaPredicted RBP13.66□□□□□ -0.22
HDLBP-236ENST00000477477 LRRC26Q2I0M4 334 aa13.66□□□□□ -0.22
HDLBP-236ENST00000477477 OLFML2BQ68BL8 750 aa13.66□□□□□ -0.22
HDLBP-236ENST00000477477 CTR9Q6PD62 1173 aa13.66□□□□□ -0.22
HDLBP-236ENST00000477477 DPP9Q86TI2 863 aa13.66□□□□□ -0.22
HDLBP-236ENST00000477477 TRPV1Q8NER1 839 aa13.66□□□□□ -0.22
HDLBP-236ENST00000477477 LRCH3Q96II8 777 aa13.66□□□□□ -0.22
HDLBP-236ENST00000477477 ECHDC1Q9NTX5 307 aa13.66□□□□□ -0.22
HDLBP-236ENST00000477477 ARPP21Q9UBL0 812 aaPredicted RBP13.66□□□□□ -0.22
HDLBP-236ENST00000477477 RLFQ13129 1914 aa13.65□□□□□ -0.22
HDLBP-236ENST00000477477 EEF2P13639 858 aaKnown RBP13.65□□□□□ -0.22
HDLBP-236ENST00000477477 PLS1Q14651 629 aa13.65□□□□□ -0.22
HDLBP-236ENST00000477477 NCAPG2Q86XI2 1143 aa13.65□□□□□ -0.22
HDLBP-236ENST00000477477 ABRAQ8N0Z2 381 aa13.65□□□□□ -0.22
HDLBP-236ENST00000477477 KBTBD3Q8NAB2 608 aa13.65□□□□□ -0.22
HDLBP-236ENST00000477477 MROH8Q9H579 483 aa13.65□□□□□ -0.22
HDLBP-236ENST00000477477 KANSL2Q9H9L4 492 aa13.65□□□□□ -0.22
HDLBP-236ENST00000477477 DNM1LO00429 736 aa13.64□□□□□ -0.23
HDLBP-236ENST00000477477 COBLO75128 1261 aa13.64□□□□□ -0.23
HDLBP-236ENST00000477477 GPATCH3Q96I76 525 aa13.64□□□□□ -0.23
HDLBP-236ENST00000477477 STRBPQ96SI9 672 aaKnown RBP13.64□□□□□ -0.23
HDLBP-236ENST00000477477 DCTPP1Q9H773 170 aa13.64□□□□□ -0.23
HDLBP-236ENST00000477477 SLC5A4Q9NY91 659 aa13.64□□□□□ -0.23
HDLBP-236ENST00000477477 BAZ2AQ9UIF9 1905 aaKnown RBP13.64□□□□□ -0.23
HDLBP-236ENST00000477477 FRMPD3Q5JV73 1810 aa13.63□□□□□ -0.23
HDLBP-236ENST00000477477 SLC25A27O95847 323 aa13.63□□□□□ -0.23
HDLBP-236ENST00000477477 TMEM132BQ14DG7 1078 aa13.63□□□□□ -0.23
HDLBP-236ENST00000477477 SBK1Q52WX2 424 aa13.63□□□□□ -0.23
HDLBP-236ENST00000477477 TSHZ3Q63HK5 1081 aa13.63□□□□□ -0.23
HDLBP-236ENST00000477477 GIMAP6Q6P9H5 292 aa13.63□□□□□ -0.23
HDLBP-236ENST00000477477 SAMD1Q6SPF0 538 aaPredicted RBP13.63□□□□□ -0.23
HDLBP-236ENST00000477477 TDHQ8IZJ6 230 aa13.63□□□□□ -0.23
HDLBP-236ENST00000477477 APPBP2Q92624 585 aa13.63□□□□□ -0.23
HDLBP-236ENST00000477477 OSBP2Q969R2 916 aa13.63□□□□□ -0.23
HDLBP-236ENST00000477477 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.63□□□□□ -0.23
HDLBP-236ENST00000477477 SENP6Q9GZR1 1112 aaPredicted RBP13.63□□□□□ -0.23
HDLBP-236ENST00000477477 GOPCQ9HD26 462 aa13.63□□□□□ -0.23
HDLBP-236ENST00000477477 FBXO28Q9NVF7 368 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms