RNA–Protein interactions for RNA: ENST00000476792.1

LIMK1-204, Transcript of LIM domain kinase 1, humanhuman

TSL 2

Gene LIMK1, Length 785 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-204ENST00000476792 MKNK2Q9HBH9 465 aa25.57■■□□□ 1.68
LIMK1-204ENST00000476792 SPDYE16A6NNV3 312 aaPredicted RBP25.56■■□□□ 1.68
LIMK1-204ENST00000476792 PATL2C9JE40 543 aaKnown RBP25.56■■□□□ 1.68
LIMK1-204ENST00000476792 EEF2P13639 858 aaKnown RBP25.56■■□□□ 1.68
LIMK1-204ENST00000476792 ZMYM1Q5SVZ6 1142 aa25.56■■□□□ 1.68
LIMK1-204ENST00000476792 GPR142Q7Z601 462 aa25.56■■□□□ 1.68
LIMK1-204ENST00000476792 NUDT12Q9BQG2 462 aa25.56■■□□□ 1.68
LIMK1-204ENST00000476792 SH2D4AQ9H788 454 aa25.56■■□□□ 1.68
LIMK1-204ENST00000476792 BTBD7Q9P203 1132 aa25.56■■□□□ 1.68
LIMK1-204ENST00000476792 TMX2Q9Y320 296 aa25.56■■□□□ 1.68
LIMK1-204ENST00000476792 SUPT16HQ9Y5B9 1047 aaKnown RBP25.56■■□□□ 1.68
LIMK1-204ENST00000476792 RAD21O60216 631 aa25.55■■□□□ 1.68
LIMK1-204ENST00000476792 GJA8P48165 433 aa25.55■■□□□ 1.68
LIMK1-204ENST00000476792 CCNA1P78396 465 aa25.55■■□□□ 1.68
LIMK1-204ENST00000476792 COG2Q14746 738 aa25.55■■□□□ 1.68
LIMK1-204ENST00000476792 PLEKHH3Q7Z736 793 aa25.55■■□□□ 1.68
LIMK1-204ENST00000476792 IFNL3Q8IZI9 196 aa25.55■■□□□ 1.68
LIMK1-204ENST00000476792 U2AF1L4Q8WU68 220 aaKnown RBP25.55■■□□□ 1.68
LIMK1-204ENST00000476792 VCPKMTQ9H867 229 aa25.55■■□□□ 1.68
LIMK1-204ENST00000476792 KANSL2Q9H9L4 492 aa25.55■■□□□ 1.68
LIMK1-204ENST00000476792 STAP2Q9UGK3 403 aa25.55■■□□□ 1.68
LIMK1-204ENST00000476792 IGHDP01880 384 aa25.54■■□□□ 1.68
LIMK1-204ENST00000476792 HMGCRP04035 888 aa25.54■■□□□ 1.68
LIMK1-204ENST00000476792 TRIM32Q13049 653 aa25.54■■□□□ 1.68
LIMK1-204ENST00000476792 CCDC129Q6ZRS4 1044 aa25.54■■□□□ 1.68
LIMK1-204ENST00000476792 SOCS4Q8WXH5 440 aa25.54■■□□□ 1.68
LIMK1-204ENST00000476792 DEFB118Q96PH6 123 aa25.54■■□□□ 1.68
LIMK1-204ENST00000476792 NACAP1Q9BZK3 213 aa25.54■■□□□ 1.68
LIMK1-204ENST00000476792 PRDM1O75626 825 aa25.53■■□□□ 1.68
LIMK1-204ENST00000476792 RASA1P20936 1047 aa25.53■■□□□ 1.68
LIMK1-204ENST00000476792 LPAR1Q92633 364 aa25.53■■□□□ 1.68
LIMK1-204ENST00000476792 EVI5LQ96CN4 794 aa25.53■■□□□ 1.68
LIMK1-204ENST00000476792 HOXC10Q9NYD6 342 aa25.53■■□□□ 1.68
LIMK1-204ENST00000476792 PLXNB2O15031 1838 aa25.53■■□□□ 1.68
LIMK1-204ENST00000476792 FLOT1O75955 427 aa25.52■■□□□ 1.68
LIMK1-204ENST00000476792 SGPL1O95470 568 aa25.52■■□□□ 1.68
LIMK1-204ENST00000476792 LBX2Q6XYB7 198 aa25.52■■□□□ 1.68
LIMK1-204ENST00000476792 SMC5Q8IY18 1101 aa25.52■■□□□ 1.68
LIMK1-204ENST00000476792 TRIB2Q92519 343 aa25.52■■□□□ 1.68
LIMK1-204ENST00000476792 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.52■■□□□ 1.68
LIMK1-204ENST00000476792 NAPBQ9H115 298 aa25.52■■□□□ 1.68
LIMK1-204ENST00000476792 TFRCP02786 760 aaKnown RBP25.51■■□□□ 1.67
LIMK1-204ENST00000476792 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.51■■□□□ 1.67
LIMK1-204ENST00000476792 RGS2P41220 211 aa25.5■■□□□ 1.67
LIMK1-204ENST00000476792 MORN1Q5T089 497 aa25.5■■□□□ 1.67
LIMK1-204ENST00000476792 ZNF444Q8N0Y2 327 aaPredicted RBP25.5■■□□□ 1.67
LIMK1-204ENST00000476792 ROBO3Q96MS0 1386 aa25.5■■□□□ 1.67
LIMK1-204ENST00000476792 GOPCQ9HD26 462 aa25.5■■□□□ 1.67
LIMK1-204ENST00000476792 WDR46O15213 610 aaKnown RBP25.49■■□□□ 1.67
LIMK1-204ENST00000476792 ZKSCAN1P17029 563 aaPredicted RBP25.49■■□□□ 1.67
LIMK1-204ENST00000476792 DSG3P32926 999 aa25.49■■□□□ 1.67
LIMK1-204ENST00000476792 PLS1Q14651 629 aa25.49■■□□□ 1.67
LIMK1-204ENST00000476792 CCL14Q16627 93 aa25.49■■□□□ 1.67
LIMK1-204ENST00000476792 USP6NLQ92738 828 aa25.49■■□□□ 1.67
LIMK1-204ENST00000476792 ATG4CQ96DT6 458 aa25.49■■□□□ 1.67
LIMK1-204ENST00000476792 PAK6Q9NQU5 681 aaPredicted RBP25.49■■□□□ 1.67
LIMK1-204ENST00000476792 IVNS1ABPQ9Y6Y0 642 aa25.49■■□□□ 1.67
LIMK1-204ENST00000476792 TRIM6-TRIM34B2RNG4 842 aa25.48■■□□□ 1.67
LIMK1-204ENST00000476792 FARP2O94887 1054 aaPredicted RBP25.48■■□□□ 1.67
LIMK1-204ENST00000476792 XRCC5P13010 732 aaKnown RBP25.48■■□□□ 1.67
LIMK1-204ENST00000476792 CHD1LQ86WJ1 897 aa25.48■■□□□ 1.67
LIMK1-204ENST00000476792 MOV10L1Q9BXT6 1211 aaKnown RBP25.48■■□□□ 1.67
LIMK1-204ENST00000476792 ZNF287Q9HBT7 754 aa25.48■■□□□ 1.67
LIMK1-204ENST00000476792 HMX1Q9NP08 348 aaPredicted RBP25.48■■□□□ 1.67
LIMK1-204ENST00000476792 RPTORQ8N122 1335 aa25.47■■□□□ 1.67
LIMK1-204ENST00000476792 PRKAR2AP13861 404 aaKnown RBP25.47■■□□□ 1.67
LIMK1-204ENST00000476792 PTPREP23469 700 aa25.47■■□□□ 1.67
LIMK1-204ENST00000476792 IRX6P78412 446 aaPredicted RBP25.47■■□□□ 1.67
LIMK1-204ENST00000476792 PPARAQ07869 468 aa25.47■■□□□ 1.67
LIMK1-204ENST00000476792 MAP2K5Q13163 448 aa25.47■■□□□ 1.67
LIMK1-204ENST00000476792 RILPL2Q969X0 211 aa25.47■■□□□ 1.67
LIMK1-204ENST00000476792 APBA2Q99767 749 aa25.47■■□□□ 1.67
LIMK1-204ENST00000476792 FBXO28Q9NVF7 368 aa25.47■■□□□ 1.67
LIMK1-204ENST00000476792 SLC15A5A6NIM6 579 aa25.46■■□□□ 1.67
LIMK1-204ENST00000476792 SLC3A2P08195 630 aaKnown RBP25.46■■□□□ 1.67
LIMK1-204ENST00000476792 FAM83BQ5T0W9 1011 aa25.46■■□□□ 1.67
LIMK1-204ENST00000476792 DPF3Q92784 378 aa25.46■■□□□ 1.67
LIMK1-204ENST00000476792 FAM227BQ96M60 508 aa25.46■■□□□ 1.67
LIMK1-204ENST00000476792 NUP88Q99567 741 aaPredicted RBP25.46■■□□□ 1.67
LIMK1-204ENST00000476792 SPATC1LQ9H0A9 340 aa25.46■■□□□ 1.67
LIMK1-204ENST00000476792 CLIP2Q9UDT6 1046 aa25.46■■□□□ 1.67
LIMK1-204ENST00000476792 RLFQ13129 1914 aa25.45■■□□□ 1.67
LIMK1-204ENST00000476792 NUCB1Q02818 461 aa25.45■■□□□ 1.66
LIMK1-204ENST00000476792 PDE4BQ07343 736 aa25.45■■□□□ 1.66
LIMK1-204ENST00000476792 FAM47AQ5JRC9 791 aa25.45■■□□□ 1.66
LIMK1-204ENST00000476792 VPS53Q5VIR6 699 aa25.45■■□□□ 1.66
LIMK1-204ENST00000476792 TRMT44Q8IYL2 757 aaKnown RBP25.45■■□□□ 1.66
LIMK1-204ENST00000476792 MB21D1Q8N884 522 aa25.45■■□□□ 1.66
LIMK1-204ENST00000476792 NYAP2Q9P242 653 aa25.45■■□□□ 1.66
LIMK1-204ENST00000476792 FOXP2O15409 715 aa25.44■■□□□ 1.66
LIMK1-204ENST00000476792 ERCC3P19447 782 aa25.44■■□□□ 1.66
LIMK1-204ENST00000476792 CTDSPL2Q05D32 466 aa25.44■■□□□ 1.66
LIMK1-204ENST00000476792 NCAPG2Q86XI2 1143 aa25.44■■□□□ 1.66
LIMK1-204ENST00000476792 HELLSQ9NRZ9 838 aa25.44■■□□□ 1.66
LIMK1-204ENST00000476792 A0A0D9SFI3 127 aa25.43■■□□□ 1.66
LIMK1-204ENST00000476792 TSPY3P0CV98 308 aa25.43■■□□□ 1.66
LIMK1-204ENST00000476792 TSPY8P0CW00 308 aa25.43■■□□□ 1.66
LIMK1-204ENST00000476792 CACNB2Q08289 660 aaPredicted RBP25.43■■□□□ 1.66
LIMK1-204ENST00000476792 NMIQ13287 307 aaPredicted RBP25.43■■□□□ 1.66
LIMK1-204ENST00000476792 UBE2Q1Q7Z7E8 422 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms