RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 PPP4R3BQ5MIZ7 849 aa33.5■■■□□ 2.95
VEGFA-211ENST00000476772 FOXD4L3Q6VB84 417 aaPredicted RBP33.5■■■□□ 2.95
VEGFA-211ENST00000476772 SRBD1Q8N5C6 995 aaKnown RBP33.5■■■□□ 2.95
VEGFA-211ENST00000476772 RNF26Q9BY78 433 aaPredicted RBP33.5■■■□□ 2.95
VEGFA-211ENST00000476772 GGA3Q9NZ52 723 aa33.5■■■□□ 2.95
VEGFA-211ENST00000476772 CNTNAP5Q8WYK1 1306 aa33.5■■■□□ 2.95
VEGFA-211ENST00000476772 GH2P01242 217 aa33.49■■■□□ 2.95
VEGFA-211ENST00000476772 ATP2B2Q01814 1243 aa33.49■■■□□ 2.95
VEGFA-211ENST00000476772 DPY19L2Q6NUT2 758 aa33.49■■■□□ 2.95
VEGFA-211ENST00000476772 STAG2Q8N3U4 1231 aa33.49■■■□□ 2.95
VEGFA-211ENST00000476772 KANSL2Q9H9L4 492 aa33.49■■■□□ 2.95
VEGFA-211ENST00000476772 ADARB2Q9NS39 739 aaKnown RBP33.49■■■□□ 2.95
VEGFA-211ENST00000476772 MYH6P13533 1939 aa33.49■■■□□ 2.95
VEGFA-211ENST00000476772 MAP3K10Q02779 954 aa33.48■■■□□ 2.95
VEGFA-211ENST00000476772 OTUD7BQ6GQQ9 843 aa33.48■■■□□ 2.95
VEGFA-211ENST00000476772 GJB4Q9NTQ9 266 aa33.48■■■□□ 2.95
VEGFA-211ENST00000476772 DEXIO95424 95 aa33.48■■■□□ 2.95
VEGFA-211ENST00000476772 CABP5Q9NP86 173 aa33.48■■■□□ 2.95
VEGFA-211ENST00000476772 EEF2P13639 858 aaKnown RBP33.47■■■□□ 2.95
VEGFA-211ENST00000476772 ICA1Q05084 483 aa33.47■■■□□ 2.95
VEGFA-211ENST00000476772 FBXO18Q8NFZ0 1043 aa33.47■■■□□ 2.95
VEGFA-211ENST00000476772 WASF1Q92558 559 aa33.47■■■□□ 2.95
VEGFA-211ENST00000476772 NYAP2Q9P242 653 aa33.47■■■□□ 2.95
VEGFA-211ENST00000476772 ZC3H4Q9UPT8 1303 aaKnown RBP33.47■■■□□ 2.95
VEGFA-211ENST00000476772 PALM3A6NDB9 673 aaPredicted RBP33.46■■■□□ 2.95
VEGFA-211ENST00000476772 ATP6V1DQ9Y5K8 247 aa33.46■■■□□ 2.95
VEGFA-211ENST00000476772 PRPF3O43395 683 aaKnown RBP33.45■■■□□ 2.95
VEGFA-211ENST00000476772 GNAQP50148 359 aa33.45■■■□□ 2.95
VEGFA-211ENST00000476772 AKAP17AQ02040 695 aaKnown RBP33.45■■■□□ 2.95
VEGFA-211ENST00000476772 RESTQ13127 1097 aa33.45■■■□□ 2.95
VEGFA-211ENST00000476772 MCTP1Q6DN14 999 aa33.45■■■□□ 2.95
VEGFA-211ENST00000476772 USP17L5A8MUK1 530 aa33.45■■■□□ 2.94
VEGFA-211ENST00000476772 PARP1P09874 1014 aaKnown RBP33.45■■■□□ 2.94
VEGFA-211ENST00000476772 GOLGA8HP0CJ92 632 aa33.45■■■□□ 2.94
VEGFA-211ENST00000476772 PDHBP11177 359 aa33.45■■■□□ 2.94
VEGFA-211ENST00000476772 USP17L2Q6R6M4 530 aa33.45■■■□□ 2.94
VEGFA-211ENST00000476772 SIAH1Q8IUQ4 282 aa33.45■■■□□ 2.94
VEGFA-211ENST00000476772 L3MBTL3Q96JM7 780 aaPredicted RBP33.45■■■□□ 2.94
VEGFA-211ENST00000476772 V9GY48 417 aaPredicted RBP33.45■■■□□ 2.94
VEGFA-211ENST00000476772 hCG_1642624A0A1W2PR95 340 aa33.44■■■□□ 2.94
VEGFA-211ENST00000476772 NBPF12Q5TAG4 269 aaPredicted RBP33.44■■■□□ 2.94
VEGFA-211ENST00000476772 MKL1Q969V6 931 aa33.44■■■□□ 2.94
VEGFA-211ENST00000476772 DDX11L8A8MPP1 907 aa33.43■■■□□ 2.94
VEGFA-211ENST00000476772 ZBTB21Q9ULJ3 1066 aa33.43■■■□□ 2.94
VEGFA-211ENST00000476772 SNHG28P0DPA3 235 aa33.42■■■□□ 2.94
VEGFA-211ENST00000476772 PKN1Q16512 942 aa33.42■■■□□ 2.94
VEGFA-211ENST00000476772 RGS22Q8NE09 1264 aa33.42■■■□□ 2.94
VEGFA-211ENST00000476772 CAP2P40123 477 aa33.42■■■□□ 2.94
VEGFA-211ENST00000476772 KRT40Q6A162 431 aa33.42■■■□□ 2.94
VEGFA-211ENST00000476772 GLTPD2A6NH11 291 aa33.41■■■□□ 2.94
VEGFA-211ENST00000476772 KLRF2D3W0D1 207 aa33.41■■■□□ 2.94
VEGFA-211ENST00000476772 SLC35G1Q2M3R5 365 aa33.41■■■□□ 2.94
VEGFA-211ENST00000476772 LZTS2Q9BRK4 669 aa33.41■■■□□ 2.94
VEGFA-211ENST00000476772 ZSCAN16Q9H4T2 348 aaPredicted RBP33.41■■■□□ 2.94
VEGFA-211ENST00000476772 PITPNM2Q9BZ72 1349 aa33.41■■■□□ 2.94
VEGFA-211ENST00000476772 PHF20L1A8MW92 1017 aa33.4■■■□□ 2.94
VEGFA-211ENST00000476772 TRIM29Q14134 588 aa33.4■■■□□ 2.94
VEGFA-211ENST00000476772 FAM173BQ6P4H8 233 aa33.4■■■□□ 2.94
VEGFA-211ENST00000476772 FRMPD2Q68DX3 1309 aaPredicted RBP33.4■■■□□ 2.94
VEGFA-211ENST00000476772 BAZ2BQ9UIF8 2168 aaKnown RBP33.4■■■□□ 2.94
VEGFA-211ENST00000476772 TCHHQ07283 1943 aa33.4■■■□□ 2.94
VEGFA-211ENST00000476772 GOLGA6L22H0YM25 854 aa33.39■■■□□ 2.94
VEGFA-211ENST00000476772 PRAMEF18Q5VWM3 479 aa33.39■■■□□ 2.94
VEGFA-211ENST00000476772 PPP2R3BQ9Y5P8 575 aa33.39■■■□□ 2.94
VEGFA-211ENST00000476772 ATAD5Q96QE3 1844 aa33.39■■■□□ 2.94
VEGFA-211ENST00000476772 POLR2AP24928 1970 aaKnown RBP33.39■■■□□ 2.94
VEGFA-211ENST00000476772 CYTH3O43739 400 aa33.39■■■□□ 2.94
VEGFA-211ENST00000476772 DNM1Q05193 864 aaKnown RBP33.39■■■□□ 2.94
VEGFA-211ENST00000476772 ASPRV1Q53RT3 343 aa33.39■■■□□ 2.94
VEGFA-211ENST00000476772 PIBF1Q8WXW3 757 aa33.39■■■□□ 2.94
VEGFA-211ENST00000476772 CPVLQ9H3G5 476 aa33.38■■■□□ 2.93
VEGFA-211ENST00000476772 FRMD4AQ9P2Q2 1039 aaPredicted RBP33.38■■■□□ 2.93
VEGFA-211ENST00000476772 SPZ1Q9BXG8 430 aa33.37■■■□□ 2.93
VEGFA-211ENST00000476772 CNPY2Q9Y2B0 182 aa33.37■■■□□ 2.93
VEGFA-211ENST00000476772 MYH15Q9Y2K3 1946 aa33.37■■■□□ 2.93
VEGFA-211ENST00000476772 ZNF543Q08ER8 600 aa33.36■■■□□ 2.93
VEGFA-211ENST00000476772 RBM27Q9P2N5 1060 aaKnown RBP33.36■■■□□ 2.93
VEGFA-211ENST00000476772 A0A1W2PRG0 241 aa33.36■■■□□ 2.93
VEGFA-211ENST00000476772 KIF23Q02241 960 aaPredicted RBP33.36■■■□□ 2.93
VEGFA-211ENST00000476772 DCAF15Q66K64 600 aa33.36■■■□□ 2.93
VEGFA-211ENST00000476772 SHISA4Q96DD7 197 aa33.36■■■□□ 2.93
VEGFA-211ENST00000476772 RAD21O60216 631 aa33.35■■■□□ 2.93
VEGFA-211ENST00000476772 EPHX2P34913 555 aa33.35■■■□□ 2.93
VEGFA-211ENST00000476772 PFKFB3Q16875 520 aaPredicted RBP33.35■■■□□ 2.93
VEGFA-211ENST00000476772 SLFN13Q68D06 897 aa33.35■■■□□ 2.93
VEGFA-211ENST00000476772 HOOK2Q96ED9 719 aa33.35■■■□□ 2.93
VEGFA-211ENST00000476772 ARHGEF10LQ9HCE6 1279 aa33.35■■■□□ 2.93
VEGFA-211ENST00000476772 GPCPD1Q9NPB8 672 aa33.35■■■□□ 2.93
VEGFA-211ENST00000476772 VPS54Q9P1Q0 977 aa33.35■■■□□ 2.93
VEGFA-211ENST00000476772 KCNJ14Q9UNX9 436 aa33.35■■■□□ 2.93
VEGFA-211ENST00000476772 KIF28PB7ZC32 967 aa33.34■■■□□ 2.93
VEGFA-211ENST00000476772 ASNSP08243 561 aa33.34■■■□□ 2.93
VEGFA-211ENST00000476772 SCG2P13521 617 aa33.34■■■□□ 2.93
VEGFA-211ENST00000476772 NCLP19338 710 aaKnown RBP33.34■■■□□ 2.93
VEGFA-211ENST00000476772 CCDC96Q2M329 555 aa33.34■■■□□ 2.93
VEGFA-211ENST00000476772 USP50Q70EL3 339 aaPredicted RBP33.34■■■□□ 2.93
VEGFA-211ENST00000476772 GMCL1P1Q8NEA9 526 aa33.34■■■□□ 2.93
VEGFA-211ENST00000476772 UBA5Q9GZZ9 404 aa33.34■■■□□ 2.93
VEGFA-211ENST00000476772 GDPD2Q9HCC8 539 aa33.34■■■□□ 2.93
VEGFA-211ENST00000476772 SMARCA1P28370 1054 aa33.33■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms