RNA–Protein interactions for RNA: ENST00000476743.5

MSL3-213, Transcript of MSL complex subunit 3, humanhuman

TSL 4

Gene MSL3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-213ENST00000476743 MKNK2Q9HBH9 465 aa16.37■□□□□ 0.21
MSL3-213ENST00000476743 GABRQQ9UN88 632 aa16.37■□□□□ 0.21
MSL3-213ENST00000476743 RABGAP1Q9Y3P9 1069 aa16.37■□□□□ 0.21
MSL3-213ENST00000476743 ZMYM6O95789 1325 aa16.37■□□□□ 0.21
MSL3-213ENST00000476743 KIAA0100Q14667 2235 aaKnown RBP16.36■□□□□ 0.21
MSL3-213ENST00000476743 SPDYE16A6NNV3 312 aaPredicted RBP16.36■□□□□ 0.21
MSL3-213ENST00000476743 CNMDO75829 334 aa16.36■□□□□ 0.21
MSL3-213ENST00000476743 EEF2P13639 858 aaKnown RBP16.36■□□□□ 0.21
MSL3-213ENST00000476743 ERVK-9P63128 1117 aa16.36■□□□□ 0.21
MSL3-213ENST00000476743 ERVK-24P63145 666 aa16.36■□□□□ 0.21
MSL3-213ENST00000476743 NMIQ13287 307 aaPredicted RBP16.36■□□□□ 0.21
MSL3-213ENST00000476743 RAET1EQ8TD07 263 aa16.36■□□□□ 0.21
MSL3-213ENST00000476743 COA7Q96BR5 231 aa16.36■□□□□ 0.21
MSL3-213ENST00000476743 NYAP2Q9P242 653 aa16.36■□□□□ 0.21
MSL3-213ENST00000476743 ANAPC4Q9UJX5 808 aa16.36■□□□□ 0.21
MSL3-213ENST00000476743 MYH4Q9Y623 1939 aa16.35■□□□□ 0.21
MSL3-213ENST00000476743 GRK4P32298 578 aa16.35■□□□□ 0.21
MSL3-213ENST00000476743 FLT3LGP49771 235 aa16.35■□□□□ 0.21
MSL3-213ENST00000476743 PDE4BQ07343 736 aa16.35■□□□□ 0.21
MSL3-213ENST00000476743 Q3C1V9 767 aa16.35■□□□□ 0.21
MSL3-213ENST00000476743 ZNF589Q86UQ0 364 aaPredicted RBP16.35■□□□□ 0.21
MSL3-213ENST00000476743 PXYLP1Q8TE99 480 aa16.35■□□□□ 0.21
MSL3-213ENST00000476743 SH3TC2Q8TF17 1288 aa16.35■□□□□ 0.21
MSL3-213ENST00000476743 GJD2Q9UKL4 321 aa16.35■□□□□ 0.21
MSL3-213ENST00000476743 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.35■□□□□ 0.21
MSL3-213ENST00000476743 CCDC171Q6TFL3 1326 aa16.35■□□□□ 0.21
MSL3-213ENST00000476743 WDR46O15213 610 aaKnown RBP16.34■□□□□ 0.21
MSL3-213ENST00000476743 PEX10O60683 326 aa16.34■□□□□ 0.21
MSL3-213ENST00000476743 SLC3A2P08195 630 aaKnown RBP16.34■□□□□ 0.21
MSL3-213ENST00000476743 FGRP09769 529 aa16.34■□□□□ 0.21
MSL3-213ENST00000476743 HSPD1P10809 573 aaKnown RBP16.34■□□□□ 0.21
MSL3-213ENST00000476743 MLLT1Q03111 559 aaPredicted RBP16.34■□□□□ 0.21
MSL3-213ENST00000476743 COG2Q14746 738 aa16.34■□□□□ 0.21
MSL3-213ENST00000476743 ZNF444Q8N0Y2 327 aaPredicted RBP16.34■□□□□ 0.21
MSL3-213ENST00000476743 SLAIN1Q8ND83 568 aa16.34■□□□□ 0.21
MSL3-213ENST00000476743 NEDD1Q8NHV4 660 aa16.34■□□□□ 0.21
MSL3-213ENST00000476743 SYNPO2Q9UMS6 1093 aa16.34■□□□□ 0.21
MSL3-213ENST00000476743 HIP1O00291 1037 aa16.33■□□□□ 0.2
MSL3-213ENST00000476743 PRDM1O75626 825 aa16.33■□□□□ 0.2
MSL3-213ENST00000476743 FGAP02671 866 aa16.33■□□□□ 0.2
MSL3-213ENST00000476743 GSPT1P15170 499 aaKnown RBP16.33■□□□□ 0.2
MSL3-213ENST00000476743 MAPK4P31152 587 aa16.33■□□□□ 0.2
MSL3-213ENST00000476743 TTC22Q5TAA0 569 aa16.33■□□□□ 0.2
MSL3-213ENST00000476743 STK11IPQ8N1F8 1099 aa16.33■□□□□ 0.2
MSL3-213ENST00000476743 MKL1Q969V6 931 aa16.33■□□□□ 0.2
MSL3-213ENST00000476743 HOXC10Q9NYD6 342 aa16.33■□□□□ 0.2
MSL3-213ENST00000476743 BTBD7Q9P203 1132 aa16.33■□□□□ 0.2
MSL3-213ENST00000476743 POTEFA5A3E0 1075 aa16.32■□□□□ 0.2
MSL3-213ENST00000476743 ADCY3O60266 1144 aa16.32■□□□□ 0.2
MSL3-213ENST00000476743 DSG3P32926 999 aa16.32■□□□□ 0.2
MSL3-213ENST00000476743 MFAP1P55081 439 aaKnown RBP16.32■□□□□ 0.2
MSL3-213ENST00000476743 LAMA4Q16363 1823 aa16.32■□□□□ 0.2
MSL3-213ENST00000476743 PAGR1Q9BTK6 254 aa16.32■□□□□ 0.2
MSL3-213ENST00000476743 PORCNQ9H237 461 aa16.32■□□□□ 0.2
MSL3-213ENST00000476743 GOPCQ9HD26 462 aa16.32■□□□□ 0.2
MSL3-213ENST00000476743 MTMR4Q9NYA4 1195 aa16.32■□□□□ 0.2
MSL3-213ENST00000476743 TACC3Q9Y6A5 838 aa16.32■□□□□ 0.2
MSL3-213ENST00000476743 MKI67P46013 3256 aaKnown RBP16.32■□□□□ 0.2
MSL3-213ENST00000476743 ORC4O43929 436 aa16.31■□□□□ 0.2
MSL3-213ENST00000476743 CCNA1P78396 465 aa16.31■□□□□ 0.2
MSL3-213ENST00000476743 CTDSPL2Q05D32 466 aa16.31■□□□□ 0.2
MSL3-213ENST00000476743 SPICE1Q8N0Z3 855 aa16.31■□□□□ 0.2
MSL3-213ENST00000476743 MB21D1Q8N884 522 aa16.31■□□□□ 0.2
MSL3-213ENST00000476743 USP6NLQ92738 828 aa16.31■□□□□ 0.2
MSL3-213ENST00000476743 CEP95Q96GE4 821 aa16.31■□□□□ 0.2
MSL3-213ENST00000476743 TANGO6Q9C0B7 1094 aa16.31■□□□□ 0.2
MSL3-213ENST00000476743 DIAPH3Q9NSV4 1193 aa16.31■□□□□ 0.2
MSL3-213ENST00000476743 ADAMTS5Q9UNA0 930 aa16.31■□□□□ 0.2
MSL3-213ENST00000476743 COL11A1P12107 1806 aaPredicted RBP16.31■□□□□ 0.2
MSL3-213ENST00000476743 TSPY3P0CV98 308 aa16.3■□□□□ 0.2
MSL3-213ENST00000476743 TSPY8P0CW00 308 aa16.3■□□□□ 0.2
MSL3-213ENST00000476743 NOVP48745 357 aa16.3■□□□□ 0.2
MSL3-213ENST00000476743 TFAP4Q01664 338 aa16.3■□□□□ 0.2
MSL3-213ENST00000476743 ATP2B2Q01814 1243 aa16.3■□□□□ 0.2
MSL3-213ENST00000476743 MTFR1Q15390 333 aa16.3■□□□□ 0.2
MSL3-213ENST00000476743 MORN1Q5T089 497 aa16.3■□□□□ 0.2
MSL3-213ENST00000476743 CWC27Q6UX04 472 aaKnown RBP16.3■□□□□ 0.2
MSL3-213ENST00000476743 GPR142Q7Z601 462 aa16.3■□□□□ 0.2
MSL3-213ENST00000476743 PLEKHH3Q7Z736 793 aa16.3■□□□□ 0.2
MSL3-213ENST00000476743 SOCS4Q8WXH5 440 aa16.3■□□□□ 0.2
MSL3-213ENST00000476743 TMEM106CQ9BVX2 250 aa16.3■□□□□ 0.2
MSL3-213ENST00000476743 ZNF236Q9UL36 1845 aa16.3■□□□□ 0.2
MSL3-213ENST00000476743 F5H6K3 240 aa16.29■□□□□ 0.2
MSL3-213ENST00000476743 FLOT1O75955 427 aa16.29■□□□□ 0.2
MSL3-213ENST00000476743 TTLL1O95922 423 aa16.29■□□□□ 0.2
MSL3-213ENST00000476743 XRCC5P13010 732 aaKnown RBP16.29■□□□□ 0.2
MSL3-213ENST00000476743 ELNP15502 786 aa16.29■□□□□ 0.2
MSL3-213ENST00000476743 UBXN2AP68543 259 aa16.29■□□□□ 0.2
MSL3-213ENST00000476743 KLRC3Q07444 240 aa16.29■□□□□ 0.2
MSL3-213ENST00000476743 FAM47AQ5JRC9 791 aa16.29■□□□□ 0.2
MSL3-213ENST00000476743 GMCL1P1Q8NEA9 526 aa16.29■□□□□ 0.2
MSL3-213ENST00000476743 NUDT12Q9BQG2 462 aa16.29■□□□□ 0.2
MSL3-213ENST00000476743 INCENPQ9NQS7 918 aa16.29■□□□□ 0.2
MSL3-213ENST00000476743 CLIP2Q9UDT6 1046 aa16.29■□□□□ 0.2
MSL3-213ENST00000476743 NDUFB10O96000 172 aa16.28■□□□□ 0.2
MSL3-213ENST00000476743 INHAP05111 366 aa16.28■□□□□ 0.2
MSL3-213ENST00000476743 PCP11498 1178 aaKnown RBP16.28■□□□□ 0.2
MSL3-213ENST00000476743 PPP4R3BQ5MIZ7 849 aa16.28■□□□□ 0.2
MSL3-213ENST00000476743 FAM83BQ5T0W9 1011 aa16.28■□□□□ 0.2
MSL3-213ENST00000476743 SHCBP1Q8NEM2 672 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms