RNA–Protein interactions for RNA: ENST00000476241.2

HNRNPU-209, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 4,844 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-209ENST00000476241 PPARAQ07869 468 aa17.97■□□□□ 0.47
HNRNPU-209ENST00000476241 UBE3CQ15386 1083 aa17.97■□□□□ 0.47
HNRNPU-209ENST00000476241 HAUS3Q68CZ6 603 aa17.97■□□□□ 0.47
HNRNPU-209ENST00000476241 SND1Q7KZF4 910 aaKnown RBP eCLIP17.97■□□□□ 0.472e-20■□□□□ 8.1
HNRNPU-209ENST00000476241 ATP6V0A2Q9Y487 856 aa17.97■□□□□ 0.47
HNRNPU-209ENST00000476241 PROSER3Q2NL68 480 aa17.97■□□□□ 0.47
HNRNPU-209ENST00000476241 BLZF1Q9H2G9 400 aa17.97■□□□□ 0.47
HNRNPU-209ENST00000476241 ACTN4O43707 911 aaKnown RBP17.96■□□□□ 0.47
HNRNPU-209ENST00000476241 DNM2P50570 870 aa17.96■□□□□ 0.47
HNRNPU-209ENST00000476241 DLGAP5Q15398 846 aa17.96■□□□□ 0.47
HNRNPU-209ENST00000476241 C11orf57Q6ZUT1 292 aaPredicted RBP17.96■□□□□ 0.47
HNRNPU-209ENST00000476241 PPP1R13BQ96KQ4 1090 aa17.96■□□□□ 0.47
HNRNPU-209ENST00000476241 PAIP2Q9BPZ3 127 aaKnown RBP17.96■□□□□ 0.47
HNRNPU-209ENST00000476241 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.96■□□□□ 0.473e-7■□□□□ 11.1
HNRNPU-209ENST00000476241 PREX2Q70Z35 1606 aa17.96■□□□□ 0.47
HNRNPU-209ENST00000476241 B4DLN1 442 aa17.96■□□□□ 0.47
HNRNPU-209ENST00000476241 LARGE1O95461 756 aa17.96■□□□□ 0.47
HNRNPU-209ENST00000476241 ASIC2Q16515 512 aa17.96■□□□□ 0.47
HNRNPU-209ENST00000476241 DPCR1Q3MIW9 517 aa17.96■□□□□ 0.47
HNRNPU-209ENST00000476241 CABP7Q86V35 215 aa17.96■□□□□ 0.47
HNRNPU-209ENST00000476241 WDR66Q8TBY9 1149 aa17.96■□□□□ 0.47
HNRNPU-209ENST00000476241 MAST3O60307 1309 aa17.96■□□□□ 0.47
HNRNPU-209ENST00000476241 ERCC5P28715 1186 aaPredicted RBP17.96■□□□□ 0.47
HNRNPU-209ENST00000476241 CRKLP46109 303 aaKnown RBP17.96■□□□□ 0.47
HNRNPU-209ENST00000476241 LRRC24Q50LG9 513 aa17.96■□□□□ 0.47
HNRNPU-209ENST00000476241 LINC00301Q8NCQ3 95 aa17.96■□□□□ 0.47
HNRNPU-209ENST00000476241 IFIH1Q9BYX4 1025 aaKnown RBP17.96■□□□□ 0.47
HNRNPU-209ENST00000476241 CARMIL3Q8ND23 1372 aa17.96■□□□□ 0.47
HNRNPU-209ENST00000476241 ADGRL3Q9HAR2 1447 aa17.96■□□□□ 0.47
HNRNPU-209ENST00000476241 KCNJ18B7U540 433 aa17.96■□□□□ 0.46
HNRNPU-209ENST00000476241 KCNJ12Q14500 433 aa17.96■□□□□ 0.46
HNRNPU-209ENST00000476241 IQCGQ9H095 443 aaKnown RBP17.96■□□□□ 0.46
HNRNPU-209ENST00000476241 TMEM110-MUSTN1A8MSY1 372 aa17.95■□□□□ 0.46
HNRNPU-209ENST00000476241 PCCAP05165 728 aaPredicted RBP17.95■□□□□ 0.46
HNRNPU-209ENST00000476241 ZNF827Q17R98 1081 aa17.95■□□□□ 0.46
HNRNPU-209ENST00000476241 TRIM58Q8NG06 486 aa17.95■□□□□ 0.46
HNRNPU-209ENST00000476241 CLIC6Q96NY7 704 aa17.95■□□□□ 0.46
HNRNPU-209ENST00000476241 HPDP32754 393 aaPredicted RBP17.95■□□□□ 0.46
HNRNPU-209ENST00000476241 SNX29Q8TEQ0 813 aa17.95■□□□□ 0.46
HNRNPU-209ENST00000476241 FRMD4BQ9Y2L6 1034 aa17.95■□□□□ 0.46
HNRNPU-209ENST00000476241 hCG_1642624A0A1W2PR95 340 aa17.95■□□□□ 0.46
HNRNPU-209ENST00000476241 CIAO1O76071 339 aa17.95■□□□□ 0.46
HNRNPU-209ENST00000476241 CTSWP56202 376 aa17.95■□□□□ 0.46
HNRNPU-209ENST00000476241 RESTQ13127 1097 aa17.95■□□□□ 0.46
HNRNPU-209ENST00000476241 CCDC6Q16204 474 aa17.95■□□□□ 0.46
HNRNPU-209ENST00000476241 TTLL7Q6ZT98 887 aa17.95■□□□□ 0.46
HNRNPU-209ENST00000476241 SMIM23A6NLE4 172 aa17.95■□□□□ 0.46
HNRNPU-209ENST00000476241 MORC3Q14149 939 aa17.95■□□□□ 0.46
HNRNPU-209ENST00000476241 CROCCP2Q86T23 111 aa17.95■□□□□ 0.46
HNRNPU-209ENST00000476241 HERC4Q5GLZ8 1057 aaPredicted RBP17.94■□□□□ 0.46
HNRNPU-209ENST00000476241 SEL1L2Q5TEA6 688 aa17.94■□□□□ 0.46
HNRNPU-209ENST00000476241 FERMT1Q9BQL6 677 aa17.94■□□□□ 0.46
HNRNPU-209ENST00000476241 IMPG2Q9BZV3 1241 aa17.94■□□□□ 0.46
HNRNPU-209ENST00000476241 USP6P35125 1406 aa17.94■□□□□ 0.46
HNRNPU-209ENST00000476241 STAMBPO95630 424 aa17.94■□□□□ 0.46
HNRNPU-209ENST00000476241 PPP1R7Q15435 360 aa17.94■□□□□ 0.46
HNRNPU-209ENST00000476241 GSTA5Q7RTV2 222 aa17.94■□□□□ 0.46
HNRNPU-209ENST00000476241 ZBTB38Q8NAP3 1195 aaPredicted RBP17.94■□□□□ 0.46
HNRNPU-209ENST00000476241 SPTLC3Q9NUV7 552 aa17.94■□□□□ 0.46
HNRNPU-209ENST00000476241 AATFQ9NY61 560 aaKnown RBP eCLIP17.94■□□□□ 0.462e-7■■□□□ 11.8
HNRNPU-209ENST00000476241 PRR36Q9H6K5 1346 aa17.94■□□□□ 0.46
HNRNPU-209ENST00000476241 GTPBP6O43824 516 aaPredicted RBP17.94■□□□□ 0.46
HNRNPU-209ENST00000476241 DMTNQ08495 405 aa17.94■□□□□ 0.46
HNRNPU-209ENST00000476241 CCDC25Q86WR0 208 aa17.94■□□□□ 0.46
HNRNPU-209ENST00000476241 GSDMAQ96QA5 445 aa17.94■□□□□ 0.46
HNRNPU-209ENST00000476241 TNFAIP3P21580 790 aa17.93■□□□□ 0.46
HNRNPU-209ENST00000476241 ARHGAP25P42331 645 aa17.93■□□□□ 0.46
HNRNPU-209ENST00000476241 RGS22Q8NE09 1264 aa17.93■□□□□ 0.46
HNRNPU-209ENST00000476241 PPP1R14CQ8TAE6 165 aa17.93■□□□□ 0.46
HNRNPU-209ENST00000476241 SWAP70Q9UH65 585 aa17.93■□□□□ 0.46
HNRNPU-209ENST00000476241 CDC23Q9UJX2 597 aa17.93■□□□□ 0.46
HNRNPU-209ENST00000476241 MED23Q9ULK4 1368 aa17.93■□□□□ 0.46
HNRNPU-209ENST00000476241 KLHL30Q0D2K2 578 aa17.93■□□□□ 0.46
HNRNPU-209ENST00000476241 APOA5Q6Q788 366 aa17.93■□□□□ 0.46
HNRNPU-209ENST00000476241 SPATA31A6Q5VVP1 1343 aa17.93■□□□□ 0.46
HNRNPU-209ENST00000476241 GBP6Q6ZN66 633 aa17.93■□□□□ 0.46
HNRNPU-209ENST00000476241 MED4Q9NPJ6 270 aa17.93■□□□□ 0.46
HNRNPU-209ENST00000476241 TFAP4Q01664 338 aa17.93■□□□□ 0.46
HNRNPU-209ENST00000476241 UTP11Q9Y3A2 253 aaKnown RBP17.93■□□□□ 0.46
HNRNPU-209ENST00000476241 FLOT1O75955 427 aa17.92■□□□□ 0.46
HNRNPU-209ENST00000476241 TNKSO95271 1327 aa17.92■□□□□ 0.46
HNRNPU-209ENST00000476241 EEF2P13639 858 aaKnown RBP17.92■□□□□ 0.46
HNRNPU-209ENST00000476241 PHLPP2Q6ZVD8 1323 aa17.92■□□□□ 0.46
HNRNPU-209ENST00000476241 CEP104O60308 925 aa17.92■□□□□ 0.46
HNRNPU-209ENST00000476241 SERPINB2P05120 415 aa17.92■□□□□ 0.46
HNRNPU-209ENST00000476241 RNASE9P60153 205 aaKnown RBP17.92■□□□□ 0.46
HNRNPU-209ENST00000476241 PLCB3Q01970 1234 aa17.92■□□□□ 0.46
HNRNPU-209ENST00000476241 RPS6KA1Q15418 735 aa17.92■□□□□ 0.46
HNRNPU-209ENST00000476241 GPCPD1Q9NPB8 672 aa17.92■□□□□ 0.46
HNRNPU-209ENST00000476241 SAP30BPQ9UHR5 308 aaKnown RBP17.92■□□□□ 0.46
HNRNPU-209ENST00000476241 ZBTB7AO95365 584 aa17.92■□□□□ 0.46
HNRNPU-209ENST00000476241 SFMBT2Q5VUG0 894 aa17.92■□□□□ 0.46
HNRNPU-209ENST00000476241 ZSCAN10Q96SZ4 725 aaPredicted RBP17.92■□□□□ 0.46
HNRNPU-209ENST00000476241 FOXP1Q9H334 677 aaPredicted RBP17.92■□□□□ 0.46
HNRNPU-209ENST00000476241 FAM207AQ9NSI2 230 aaPredicted RBP17.92■□□□□ 0.46
HNRNPU-209ENST00000476241 EPN1Q9Y6I3 576 aaPredicted RBP17.92■□□□□ 0.46
HNRNPU-209ENST00000476241 KIF1BO60333 1816 aa17.92■□□□□ 0.46
HNRNPU-209ENST00000476241 USP17L12C9JPN9 530 aa17.92■□□□□ 0.46
HNRNPU-209ENST00000476241 USP17L21D6R901 530 aa17.92■□□□□ 0.46
HNRNPU-209ENST00000476241 ATP5DP30049 168 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms