RNA–Protein interactions for RNA: ENST00000475795.5

UBE4B-208, Transcript of ubiquitination factor E4B, humanhuman

TSL 5

Gene UBE4B, Length 871 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-208ENST00000475795 MORN1Q5T089 497 aa8.75□□□□□ -1.01
UBE4B-208ENST00000475795 PLEKHH3Q7Z736 793 aa8.75□□□□□ -1.01
UBE4B-208ENST00000475795 TTC6Q86TZ1 520 aa8.75□□□□□ -1.01
UBE4B-208ENST00000475795 PANK1Q8TE04 598 aa8.75□□□□□ -1.01
UBE4B-208ENST00000475795 FEZ1Q99689 392 aa8.75□□□□□ -1.01
UBE4B-208ENST00000475795 APBA2Q99767 749 aa8.75□□□□□ -1.01
UBE4B-208ENST00000475795 RIOK1Q9BRS2 568 aaKnown RBP8.75□□□□□ -1.01
UBE4B-208ENST00000475795 PAGR1Q9BTK6 254 aa8.75□□□□□ -1.01
UBE4B-208ENST00000475795 NBPF3Q9H094 633 aa8.75□□□□□ -1.01
UBE4B-208ENST00000475795 OGDHLQ9ULD0 1010 aa8.75□□□□□ -1.01
UBE4B-208ENST00000475795 RABGAP1Q9Y3P9 1069 aa8.75□□□□□ -1.01
UBE4B-208ENST00000475795 ZBED9Q6R2W3 1325 aa8.75□□□□□ -1.01
UBE4B-208ENST00000475795 ZNF236Q9UL36 1845 aa8.75□□□□□ -1.01
UBE4B-208ENST00000475795 LAMA3Q16787 3333 aa8.74□□□□□ -1.01
UBE4B-208ENST00000475795 MAGEB6P1A0A0J9YX57 407 aa8.74□□□□□ -1.01
UBE4B-208ENST00000475795 CNMDO75829 334 aa8.74□□□□□ -1.01
UBE4B-208ENST00000475795 PDE6AP16499 860 aa8.74□□□□□ -1.01
UBE4B-208ENST00000475795 VCAM1P19320 739 aa8.74□□□□□ -1.01
UBE4B-208ENST00000475795 RGS2P41220 211 aa8.74□□□□□ -1.01
UBE4B-208ENST00000475795 PLCD1P51178 756 aa8.74□□□□□ -1.01
UBE4B-208ENST00000475795 CCNA1P78396 465 aa8.74□□□□□ -1.01
UBE4B-208ENST00000475795 CACNB2Q08289 660 aaPredicted RBP8.74□□□□□ -1.01
UBE4B-208ENST00000475795 TTF1Q15361 905 aaPredicted RBP8.74□□□□□ -1.01
UBE4B-208ENST00000475795 ZYXQ15942 572 aaKnown RBP8.74□□□□□ -1.01
UBE4B-208ENST00000475795 LBX2Q6XYB7 198 aa8.74□□□□□ -1.01
UBE4B-208ENST00000475795 CATSPERGQ6ZRH7 1159 aa8.74□□□□□ -1.01
UBE4B-208ENST00000475795 CCAR1Q8IX12 1150 aaKnown RBP8.74□□□□□ -1.01
UBE4B-208ENST00000475795 C7orf61Q8IZ16 206 aa8.74□□□□□ -1.01
UBE4B-208ENST00000475795 RHPN1Q8TCX5 695 aa8.74□□□□□ -1.01
UBE4B-208ENST00000475795 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.74□□□□□ -1.01
UBE4B-208ENST00000475795 KIAA1683Q9H0B3 1180 aa8.74□□□□□ -1.01
UBE4B-208ENST00000475795 C11orf49Q9H6J7 331 aa8.74□□□□□ -1.01
UBE4B-208ENST00000475795 IL1RAPL2Q9NP60 686 aa8.74□□□□□ -1.01
UBE4B-208ENST00000475795 CABP5Q9NP86 173 aa8.74□□□□□ -1.01
UBE4B-208ENST00000475795 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.74□□□□□ -1.01
UBE4B-208ENST00000475795 STAP2Q9UGK3 403 aa8.74□□□□□ -1.01
UBE4B-208ENST00000475795 COL11A1P12107 1806 aaPredicted RBP8.73□□□□□ -1.01
UBE4B-208ENST00000475795 POLR3DP05423 398 aaPredicted RBP8.73□□□□□ -1.01
UBE4B-208ENST00000475795 GUCY1A2P33402 732 aa8.73□□□□□ -1.01
UBE4B-208ENST00000475795 BMP8BP34820 402 aa8.73□□□□□ -1.01
UBE4B-208ENST00000475795 GABPAQ06546 454 aa8.73□□□□□ -1.01
UBE4B-208ENST00000475795 MAP2K5Q13163 448 aa8.73□□□□□ -1.01
UBE4B-208ENST00000475795 CCL14Q16627 93 aa8.73□□□□□ -1.01
UBE4B-208ENST00000475795 SLC9C2Q5TAH2 1124 aa8.73□□□□□ -1.01
UBE4B-208ENST00000475795 ACER1Q8TDN7 264 aa8.73□□□□□ -1.01
UBE4B-208ENST00000475795 GDF15Q99988 308 aa8.73□□□□□ -1.01
UBE4B-208ENST00000475795 CRNKL1Q9BZJ0 848 aaKnown RBP8.73□□□□□ -1.01
UBE4B-208ENST00000475795 CWC22Q9HCG8 908 aaKnown RBP8.73□□□□□ -1.01
UBE4B-208ENST00000475795 PFASO15067 1338 aa8.73□□□□□ -1.01
UBE4B-208ENST00000475795 SMCHD1A6NHR9 2005 aa8.72□□□□□ -1.01
UBE4B-208ENST00000475795 TCRBV5S4A2TA0A5A2 114 aa8.72□□□□□ -1.01
UBE4B-208ENST00000475795 SLC15A5A6NIM6 579 aa8.72□□□□□ -1.01
UBE4B-208ENST00000475795 SPDYE16A6NNV3 312 aaPredicted RBP8.72□□□□□ -1.01
UBE4B-208ENST00000475795 SOX1O00570 391 aaPredicted RBP8.72□□□□□ -1.01
UBE4B-208ENST00000475795 GLRX3O76003 335 aaKnown RBP8.72□□□□□ -1.01
UBE4B-208ENST00000475795 MS4A1P11836 297 aa8.72□□□□□ -1.01
UBE4B-208ENST00000475795 COL6A1P12109 1028 aa8.72□□□□□ -1.01
UBE4B-208ENST00000475795 PTPREP23469 700 aa8.72□□□□□ -1.01
UBE4B-208ENST00000475795 CCND3P30281 292 aaPredicted RBP8.72□□□□□ -1.01
UBE4B-208ENST00000475795 SEPT2Q15019 361 aa8.72□□□□□ -1.01
UBE4B-208ENST00000475795 RPAP2Q8IXW5 612 aaPredicted RBP8.72□□□□□ -1.01
UBE4B-208ENST00000475795 CLASRPQ8N2M8 674 aaKnown RBP8.72□□□□□ -1.01
UBE4B-208ENST00000475795 KIF1BPQ96EK5 621 aa8.72□□□□□ -1.01
UBE4B-208ENST00000475795 EDC3Q96F86 508 aaKnown RBP8.72□□□□□ -1.01
UBE4B-208ENST00000475795 DNAJC2Q99543 621 aaKnown RBP8.72□□□□□ -1.01
UBE4B-208ENST00000475795 RPAP3Q9H6T3 665 aaPredicted RBP8.72□□□□□ -1.01
UBE4B-208ENST00000475795 BTBD7Q9P203 1132 aa8.72□□□□□ -1.01
UBE4B-208ENST00000475795 ZMYND8Q9ULU4 1186 aaPredicted RBP8.72□□□□□ -1.01
UBE4B-208ENST00000475795 ZNF532Q9HCE3 1301 aa8.72□□□□□ -1.01
UBE4B-208ENST00000475795 PLXNA1Q9UIW2 1896 aa8.72□□□□□ -1.01
UBE4B-208ENST00000475795 APBB1O00213 710 aa8.71□□□□□ -1.02
UBE4B-208ENST00000475795 GOLIM4O00461 696 aa8.71□□□□□ -1.02
UBE4B-208ENST00000475795 HMMRO75330 724 aa8.71□□□□□ -1.02
UBE4B-208ENST00000475795 PPP1R37O75864 691 aa8.71□□□□□ -1.02
UBE4B-208ENST00000475795 HOXC6P09630 235 aa8.71□□□□□ -1.02
UBE4B-208ENST00000475795 IFIT2P09913 472 aaKnown RBP8.71□□□□□ -1.02
UBE4B-208ENST00000475795 GRB14Q14449 540 aa8.71□□□□□ -1.02
UBE4B-208ENST00000475795 WDR78Q5VTH9 848 aa8.71□□□□□ -1.02
UBE4B-208ENST00000475795 MFSD14CQ5VZR4 134 aa8.71□□□□□ -1.02
UBE4B-208ENST00000475795 SIRT2Q8IXJ6 389 aa8.71□□□□□ -1.02
UBE4B-208ENST00000475795 LCORLQ8N3X6 602 aa8.71□□□□□ -1.02
UBE4B-208ENST00000475795 SPRYD3Q8NCJ5 442 aa8.71□□□□□ -1.02
UBE4B-208ENST00000475795 SDR42E1Q8WUS8 393 aa8.71□□□□□ -1.02
UBE4B-208ENST00000475795 LRCH3Q96II8 777 aa8.71□□□□□ -1.02
UBE4B-208ENST00000475795 DCP1AQ9NPI6 582 aaPredicted RBP8.71□□□□□ -1.02
UBE4B-208ENST00000475795 MCM9Q9NXL9 1143 aa8.71□□□□□ -1.02
UBE4B-208ENST00000475795 FLRT1Q9NZU1 646 aa8.71□□□□□ -1.02
UBE4B-208ENST00000475795 DDX19BQ9UMR2 479 aa8.71□□□□□ -1.02
UBE4B-208ENST00000475795 IVNS1ABPQ9Y6Y0 642 aa8.71□□□□□ -1.02
UBE4B-208ENST00000475795 GREB1LQ9C091 1923 aaPredicted RBP8.7□□□□□ -1.02
UBE4B-208ENST00000475795 A0A1W2PRG0 241 aa8.7□□□□□ -1.02
UBE4B-208ENST00000475795 MPHOSPH10O00566 681 aaKnown RBP8.7□□□□□ -1.02
UBE4B-208ENST00000475795 GTPBP6O43824 516 aaPredicted RBP8.7□□□□□ -1.02
UBE4B-208ENST00000475795 RAB11FIP3O75154 756 aa8.7□□□□□ -1.02
UBE4B-208ENST00000475795 CYP2D6P10635 497 aa8.7□□□□□ -1.02
UBE4B-208ENST00000475795 SYN1P17600 705 aa8.7□□□□□ -1.02
UBE4B-208ENST00000475795 MAGEA10P43363 369 aaPredicted RBP8.7□□□□□ -1.02
UBE4B-208ENST00000475795 COG2Q14746 738 aa8.7□□□□□ -1.02
UBE4B-208ENST00000475795 DIEXFQ68CQ4 756 aaKnown RBP8.7□□□□□ -1.02
UBE4B-208ENST00000475795 TMEM179Q6ZVK1 233 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms