RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 TCP10L2B9ZVM9 353 aa8.25□□□□□ -1.09
SHQ1-207ENST00000475558 E7EWF7 191 aa8.25□□□□□ -1.09
SHQ1-207ENST00000475558 POLR3DP05423 398 aaPredicted RBP8.25□□□□□ -1.09
SHQ1-207ENST00000475558 HOXD10P28358 340 aa8.25□□□□□ -1.09
SHQ1-207ENST00000475558 PBX2P40425 430 aa8.25□□□□□ -1.09
SHQ1-207ENST00000475558 LACTBP83111 547 aaPredicted RBP8.25□□□□□ -1.09
SHQ1-207ENST00000475558 EXOSC10Q01780 885 aaKnown RBP8.25□□□□□ -1.09
SHQ1-207ENST00000475558 FKBP1CQ5VVH2 108 aa8.25□□□□□ -1.09
SHQ1-207ENST00000475558 SYNE3Q6ZMZ3 975 aa8.25□□□□□ -1.09
SHQ1-207ENST00000475558 CCDC129Q6ZRS4 1044 aa8.25□□□□□ -1.09
SHQ1-207ENST00000475558 ERO1BQ86YB8 467 aa8.25□□□□□ -1.09
SHQ1-207ENST00000475558 FOXP4Q8IVH2 680 aaPredicted RBP8.25□□□□□ -1.09
SHQ1-207ENST00000475558 ZNF444Q8N0Y2 327 aaPredicted RBP8.25□□□□□ -1.09
SHQ1-207ENST00000475558 FAM43AQ8N2R8 423 aa8.25□□□□□ -1.09
SHQ1-207ENST00000475558 MIGA1Q8NAN2 632 aa8.25□□□□□ -1.09
SHQ1-207ENST00000475558 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.25□□□□□ -1.09
SHQ1-207ENST00000475558 NKX2-3Q8TAU0 364 aa8.25□□□□□ -1.09
SHQ1-207ENST00000475558 SH3TC2Q8TF17 1288 aa8.25□□□□□ -1.09
SHQ1-207ENST00000475558 STAG1Q8WVM7 1258 aa8.25□□□□□ -1.09
SHQ1-207ENST00000475558 DPF3Q92784 378 aa8.25□□□□□ -1.09
SHQ1-207ENST00000475558 HOOK2Q96ED9 719 aa8.25□□□□□ -1.09
SHQ1-207ENST00000475558 ZNF274Q96GC6 653 aaPredicted RBP8.25□□□□□ -1.09
SHQ1-207ENST00000475558 MFRPQ9BY79 579 aa8.25□□□□□ -1.09
SHQ1-207ENST00000475558 TBC1D2Q9BYX2 928 aa8.25□□□□□ -1.09
SHQ1-207ENST00000475558 IL25Q9H293 177 aa8.25□□□□□ -1.09
SHQ1-207ENST00000475558 DCP1AQ9NPI6 582 aaPredicted RBP8.25□□□□□ -1.09
SHQ1-207ENST00000475558 TMOD2Q9NZR1 351 aa8.25□□□□□ -1.09
SHQ1-207ENST00000475558 JAG2Q9Y219 1238 aa8.25□□□□□ -1.09
SHQ1-207ENST00000475558 KIF3AQ9Y496 699 aa8.25□□□□□ -1.09
SHQ1-207ENST00000475558 CCDC196A0A1B0GTZ2 297 aa8.24□□□□□ -1.09
SHQ1-207ENST00000475558 USP17L12C9JPN9 530 aa8.24□□□□□ -1.09
SHQ1-207ENST00000475558 USP17L21D6R901 530 aa8.24□□□□□ -1.09
SHQ1-207ENST00000475558 ENTPD3O75355 529 aa8.24□□□□□ -1.09
SHQ1-207ENST00000475558 MYCP01106 439 aaPredicted RBP8.24□□□□□ -1.09
SHQ1-207ENST00000475558 HLA-DOAP06340 250 aa8.24□□□□□ -1.09
SHQ1-207ENST00000475558 BTDP43251 543 aa8.24□□□□□ -1.09
SHQ1-207ENST00000475558 CRKP46108 304 aa8.24□□□□□ -1.09
SHQ1-207ENST00000475558 RCAN1P53805 252 aa8.24□□□□□ -1.09
SHQ1-207ENST00000475558 EVCP57679 992 aa8.24□□□□□ -1.09
SHQ1-207ENST00000475558 PPARAQ07869 468 aa8.24□□□□□ -1.09
SHQ1-207ENST00000475558 SNAPC2Q13487 334 aa8.24□□□□□ -1.09
SHQ1-207ENST00000475558 CPLX2Q6PUV4 134 aaKnown RBP8.24□□□□□ -1.09
SHQ1-207ENST00000475558 IQCA1Q86XH1 822 aa8.24□□□□□ -1.09
SHQ1-207ENST00000475558 TEX11Q8IYF3 940 aa8.24□□□□□ -1.09
SHQ1-207ENST00000475558 LCORLQ8N3X6 602 aa8.24□□□□□ -1.09
SHQ1-207ENST00000475558 RGS22Q8NE09 1264 aa8.24□□□□□ -1.09
SHQ1-207ENST00000475558 TTC14Q96N46 770 aa8.24□□□□□ -1.09
SHQ1-207ENST00000475558 HTATIP2Q9BUP3 242 aa8.24□□□□□ -1.09
SHQ1-207ENST00000475558 IDI2Q9BXS1 227 aa8.24□□□□□ -1.09
SHQ1-207ENST00000475558 TMEM39BQ9GZU3 492 aa8.24□□□□□ -1.09
SHQ1-207ENST00000475558 USP40Q9NVE5 1235 aa8.24□□□□□ -1.09
SHQ1-207ENST00000475558 SWAP70Q9UH65 585 aa8.24□□□□□ -1.09
SHQ1-207ENST00000475558 OTOFQ9HC10 1997 aa8.24□□□□□ -1.09
SHQ1-207ENST00000475558 MINDY4BA8MYZ0 360 aa8.23□□□□□ -1.09
SHQ1-207ENST00000475558 BTBD19C9JJ37 291 aa8.23□□□□□ -1.09
SHQ1-207ENST00000475558 ORC4O43929 436 aa8.23□□□□□ -1.09
SHQ1-207ENST00000475558 LIFRP42702 1097 aa8.23□□□□□ -1.09
SHQ1-207ENST00000475558 DYNLL1P63167 89 aaKnown RBP8.23□□□□□ -1.09
SHQ1-207ENST00000475558 NUCB2P80303 420 aa8.23□□□□□ -1.09
SHQ1-207ENST00000475558 PPIL2Q13356 520 aa8.23□□□□□ -1.09
SHQ1-207ENST00000475558 CUL4AQ13619 759 aa8.23□□□□□ -1.09
SHQ1-207ENST00000475558 C12orf60Q5U649 245 aa8.23□□□□□ -1.09
SHQ1-207ENST00000475558 CTR9Q6PD62 1173 aa8.23□□□□□ -1.09
SHQ1-207ENST00000475558 CCDC17Q96LX7 622 aa8.23□□□□□ -1.09
SHQ1-207ENST00000475558 LLPHQ9BRT6 129 aaKnown RBP8.23□□□□□ -1.09
SHQ1-207ENST00000475558 AGXT2Q9BYV1 514 aa8.23□□□□□ -1.09
SHQ1-207ENST00000475558 ARHGAP39Q9C0H5 1083 aa8.23□□□□□ -1.09
SHQ1-207ENST00000475558 MKNK2Q9HBH9 465 aa8.23□□□□□ -1.09
SHQ1-207ENST00000475558 TCP11L1Q9NUJ3 509 aa8.23□□□□□ -1.09
SHQ1-207ENST00000475558 MCM9Q9NXL9 1143 aa8.23□□□□□ -1.09
SHQ1-207ENST00000475558 PI4KBQ9UBF8 816 aa8.23□□□□□ -1.09
SHQ1-207ENST00000475558 PALD1Q9ULE6 856 aa8.23□□□□□ -1.09
SHQ1-207ENST00000475558 NR2E3Q9Y5X4 410 aa8.23□□□□□ -1.09
SHQ1-207ENST00000475558 IRF6O14896 467 aa8.22□□□□□ -1.09
SHQ1-207ENST00000475558 GJB1P08034 283 aa8.22□□□□□ -1.09
SHQ1-207ENST00000475558 CALM1P0DP23 149 aa8.22□□□□□ -1.09
SHQ1-207ENST00000475558 CALM2P0DP24 149 aa8.22□□□□□ -1.09
SHQ1-207ENST00000475558 CALM3P0DP25 149 aa8.22□□□□□ -1.09
SHQ1-207ENST00000475558 CAPN2P17655 700 aa8.22□□□□□ -1.09
SHQ1-207ENST00000475558 PDCP20941 246 aa8.22□□□□□ -1.09
SHQ1-207ENST00000475558 GRK4P32298 578 aa8.22□□□□□ -1.09
SHQ1-207ENST00000475558 PSMC4P43686 418 aa8.22□□□□□ -1.09
SHQ1-207ENST00000475558 GJA8P48165 433 aa8.22□□□□□ -1.09
SHQ1-207ENST00000475558 RHBDL3P58872 404 aa8.22□□□□□ -1.09
SHQ1-207ENST00000475558 PPATQ06203 517 aa8.22□□□□□ -1.09
SHQ1-207ENST00000475558 ADCK5Q3MIX3 580 aa8.22□□□□□ -1.09
SHQ1-207ENST00000475558 DCAF15Q66K64 600 aa8.22□□□□□ -1.09
SHQ1-207ENST00000475558 APOBEC3HQ6NTF7 200 aaKnown RBP8.22□□□□□ -1.09
SHQ1-207ENST00000475558 C17orf99Q6UX52 265 aa8.22□□□□□ -1.09
SHQ1-207ENST00000475558 FAM83AQ86UY5 434 aa8.22□□□□□ -1.09
SHQ1-207ENST00000475558 DGKHQ86XP1 1220 aa8.22□□□□□ -1.09
SHQ1-207ENST00000475558 RAET1EQ8TD07 263 aa8.22□□□□□ -1.09
SHQ1-207ENST00000475558 TMC2Q8TDI7 906 aa8.22□□□□□ -1.09
SHQ1-207ENST00000475558 ZNF384Q8TF68 577 aa8.22□□□□□ -1.09
SHQ1-207ENST00000475558 TGFBRAP1Q8WUH2 860 aa8.22□□□□□ -1.09
SHQ1-207ENST00000475558 TMX3Q96JJ7 454 aa8.22□□□□□ -1.09
SHQ1-207ENST00000475558 TRIM47Q96LD4 638 aa8.22□□□□□ -1.09
SHQ1-207ENST00000475558 WRNIP1Q96S55 665 aa8.22□□□□□ -1.09
SHQ1-207ENST00000475558 UBAC1Q9BSL1 405 aa8.22□□□□□ -1.09
SHQ1-207ENST00000475558 CHMP5Q9NZZ3 219 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms