RNA–Protein interactions for RNA: ENST00000475506.1

SDHB-205, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-205ENST00000475506 FAM105AQ9NUU6 356 aa7.68□□□□□ -1.18
SDHB-205ENST00000475506 ZNF451Q9Y4E5 1061 aa7.68□□□□□ -1.18
SDHB-205ENST00000475506 TRAV20A0A0B4J274 112 aa7.67□□□□□ -1.18
SDHB-205ENST00000475506 GSG1L2A8MUP6 293 aa7.67□□□□□ -1.18
SDHB-205ENST00000475506 AGRPO00253 132 aa7.67□□□□□ -1.18
SDHB-205ENST00000475506 PLD2O14939 933 aa7.67□□□□□ -1.18
SDHB-205ENST00000475506 SDSP20132 328 aa7.67□□□□□ -1.18
SDHB-205ENST00000475506 HSP90AA2PQ14568 343 aaPredicted RBP7.67□□□□□ -1.18
SDHB-205ENST00000475506 NOL8Q76FK4 1167 aaKnown RBP7.67□□□□□ -1.18
SDHB-205ENST00000475506 DYMQ7RTS9 669 aa7.67□□□□□ -1.18
SDHB-205ENST00000475506 RNF180Q86T96 592 aa7.67□□□□□ -1.18
SDHB-205ENST00000475506 C2CD4AQ8NCU7 369 aaPredicted RBP7.67□□□□□ -1.18
SDHB-205ENST00000475506 DNAJB8Q8NHS0 232 aa7.67□□□□□ -1.18
SDHB-205ENST00000475506 OSBP2Q969R2 916 aa7.67□□□□□ -1.18
SDHB-205ENST00000475506 VWCEQ96DN2 955 aa7.67□□□□□ -1.18
SDHB-205ENST00000475506 CDC6Q99741 560 aa7.67□□□□□ -1.18
SDHB-205ENST00000475506 AARSD1Q9BTE6 412 aaKnown RBP7.67□□□□□ -1.18
SDHB-205ENST00000475506 CHMP4AQ9BY43 222 aa7.67□□□□□ -1.18
SDHB-205ENST00000475506 FOXQ1Q9C009 403 aa7.67□□□□□ -1.18
SDHB-205ENST00000475506 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.67□□□□□ -1.18
SDHB-205ENST00000475506 RNF208Q9H0X6 261 aa7.67□□□□□ -1.18
SDHB-205ENST00000475506 G3BP2Q9UN86 482 aaKnown RBP7.67□□□□□ -1.18
SDHB-205ENST00000475506 ATP8A1Q9Y2Q0 1164 aa7.67□□□□□ -1.18
SDHB-205ENST00000475506 ACTL7BQ9Y614 415 aa7.67□□□□□ -1.18
SDHB-205ENST00000475506 KRBA1A5PL33 1030 aa7.66□□□□□ -1.18
SDHB-205ENST00000475506 FAM83GA6ND36 823 aa7.66□□□□□ -1.18
SDHB-205ENST00000475506 PDE8AO60658 829 aa7.66□□□□□ -1.18
SDHB-205ENST00000475506 RNGTTO60942 597 aaKnown RBP7.66□□□□□ -1.18
SDHB-205ENST00000475506 FNDC3BQ53EP0 1204 aaKnown RBP7.66□□□□□ -1.18
SDHB-205ENST00000475506 NBPF12Q5TAG4 269 aaPredicted RBP7.66□□□□□ -1.18
SDHB-205ENST00000475506 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.66□□□□□ -1.18
SDHB-205ENST00000475506 DDX42Q86XP3 938 aaKnown RBP eCLIP7.66□□□□□ -1.18
SDHB-205ENST00000475506 SCUBE1Q8IWY4 988 aa7.66□□□□□ -1.18
SDHB-205ENST00000475506 CCDC144CPQ8IYA2 1237 aa7.66□□□□□ -1.18
SDHB-205ENST00000475506 KCT2Q8NC54 265 aa7.66□□□□□ -1.18
SDHB-205ENST00000475506 CHAC2Q8WUX2 184 aa7.66□□□□□ -1.18
SDHB-205ENST00000475506 SMARCC1Q92922 1105 aaPredicted RBP7.66□□□□□ -1.18
SDHB-205ENST00000475506 PPP1R14AQ96A00 147 aa7.66□□□□□ -1.18
SDHB-205ENST00000475506 CYP4F12Q9HCS2 524 aa7.66□□□□□ -1.18
SDHB-205ENST00000475506 TYW1Q9NV66 732 aaKnown RBP7.66□□□□□ -1.18
SDHB-205ENST00000475506 LRP2BPQ9P2M1 347 aa7.66□□□□□ -1.18
SDHB-205ENST00000475506 SPDYE3A6NKU9 549 aa7.65□□□□□ -1.18
SDHB-205ENST00000475506 PRODHO43272 600 aa7.65□□□□□ -1.18
SDHB-205ENST00000475506 NAT2P11245 290 aa7.65□□□□□ -1.18
SDHB-205ENST00000475506 FGFR1P11362 822 aa7.65□□□□□ -1.18
SDHB-205ENST00000475506 PABPC1P11940 636 aaKnown RBP7.65□□□□□ -1.18
SDHB-205ENST00000475506 CNGA1P29973 690 aa7.65□□□□□ -1.18
SDHB-205ENST00000475506 ASPAP45381 313 aa7.65□□□□□ -1.18
SDHB-205ENST00000475506 ANKRD39Q53RE8 183 aa7.65□□□□□ -1.18
SDHB-205ENST00000475506 ARMCX6Q7L4S7 300 aa7.65□□□□□ -1.18
SDHB-205ENST00000475506 C12orf50Q8NA57 414 aaPredicted RBP7.65□□□□□ -1.18
SDHB-205ENST00000475506 RIN3Q8TB24 985 aa7.65□□□□□ -1.18
SDHB-205ENST00000475506 IRF7Q92985 503 aa7.65□□□□□ -1.18
SDHB-205ENST00000475506 MRGPRX3Q96LB0 322 aa7.65□□□□□ -1.18
SDHB-205ENST00000475506 CAAP1Q9H8G2 361 aa7.65□□□□□ -1.18
SDHB-205ENST00000475506 FAM229AH3BQW9 127 aa7.64□□□□□ -1.19
SDHB-205ENST00000475506 S100BP04271 92 aaPredicted RBP7.64□□□□□ -1.19
SDHB-205ENST00000475506 C6orf222P0C671 652 aaPredicted RBP7.64□□□□□ -1.19
SDHB-205ENST00000475506 CD247P20963 164 aa7.64□□□□□ -1.19
SDHB-205ENST00000475506 LINC00114Q6XXX2 140 aa7.64□□□□□ -1.19
SDHB-205ENST00000475506 FERMT3Q86UX7 667 aa7.64□□□□□ -1.19
SDHB-205ENST00000475506 SMYD4Q8IYR2 804 aaPredicted RBP7.64□□□□□ -1.19
SDHB-205ENST00000475506 AGGF1Q8N302 714 aaeCLIP7.64□□□□□ -1.19
SDHB-205ENST00000475506 SLC16A10Q8TF71 515 aa7.64□□□□□ -1.19
SDHB-205ENST00000475506 TARS2Q9BW92 718 aaKnown RBP7.64□□□□□ -1.19
SDHB-205ENST00000475506 MRPL4Q9BYD3 311 aaKnown RBP7.64□□□□□ -1.19
SDHB-205ENST00000475506 MKRN2Q9H000 416 aaKnown RBP7.64□□□□□ -1.19
SDHB-205ENST00000475506 CHPF2Q9P2E5 772 aa7.64□□□□□ -1.19
SDHB-205ENST00000475506 LRIG2O94898 1065 aa7.63□□□□□ -1.19
SDHB-205ENST00000475506 RAC1P63000 192 aa7.63□□□□□ -1.19
SDHB-205ENST00000475506 AUHQ13825 339 aaKnown RBP7.63□□□□□ -1.19
SDHB-205ENST00000475506 SF1Q15637 639 aaKnown RBP7.63□□□□□ -1.19
SDHB-205ENST00000475506 NSMFQ6X4W1 530 aa7.63□□□□□ -1.19
SDHB-205ENST00000475506 ADAT2Q7Z6V5 191 aaKnown RBP7.63□□□□□ -1.19
SDHB-205ENST00000475506 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.63□□□□□ -1.19
SDHB-205ENST00000475506 C7orf61Q8IZ16 206 aa7.63□□□□□ -1.19
SDHB-205ENST00000475506 BVESQ8NE79 360 aa7.63□□□□□ -1.19
SDHB-205ENST00000475506 ADCY4Q8NFM4 1077 aa7.63□□□□□ -1.19
SDHB-205ENST00000475506 SLC7A14Q8TBB6 771 aa7.63□□□□□ -1.19
SDHB-205ENST00000475506 DCAF11Q8TEB1 546 aa7.63□□□□□ -1.19
SDHB-205ENST00000475506 KREMEN1Q96MU8 473 aa7.63□□□□□ -1.19
SDHB-205ENST00000475506 PIDD1Q9HB75 910 aa7.63□□□□□ -1.19
SDHB-205ENST00000475506 TRIM39Q9HCM9 518 aa7.63□□□□□ -1.19
SDHB-205ENST00000475506 HOMER2Q9NSB8 354 aa7.63□□□□□ -1.19
SDHB-205ENST00000475506 CEP131Q9UPN4 1083 aa7.63□□□□□ -1.19
SDHB-205ENST00000475506 THRAP3Q9Y2W1 955 aaKnown RBP7.63□□□□□ -1.19
SDHB-205ENST00000475506 DNAJC8O75937 253 aaPredicted RBP7.62□□□□□ -1.19
SDHB-205ENST00000475506 SNRPNP63162 240 aaKnown RBP7.62□□□□□ -1.19
SDHB-205ENST00000475506 NFKB2Q00653 900 aa7.62□□□□□ -1.19
SDHB-205ENST00000475506 BRDTQ58F21 947 aaPredicted RBP7.62□□□□□ -1.19
SDHB-205ENST00000475506 IGF2-ASQ6U949 168 aa7.62□□□□□ -1.19
SDHB-205ENST00000475506 LRRTM3Q86VH5 581 aa7.62□□□□□ -1.19
SDHB-205ENST00000475506 PLVAPQ9BX97 442 aa7.62□□□□□ -1.19
SDHB-205ENST00000475506 RRAGCQ9HB90 399 aa7.62□□□□□ -1.19
SDHB-205ENST00000475506 GP6Q9HCN6 339 aa7.62□□□□□ -1.19
SDHB-205ENST00000475506 SSU72Q9NP77 194 aaKnown RBP7.62□□□□□ -1.19
SDHB-205ENST00000475506 WHRNQ9P202 907 aa7.62□□□□□ -1.19
SDHB-205ENST00000475506 EMC9Q9Y3B6 208 aa7.62□□□□□ -1.19
SDHB-205ENST00000475506 DLX3O60479 287 aa7.61□□□□□ -1.19
SDHB-205ENST00000475506 SLITRK5O94991 958 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms