RNA–Protein interactions for RNA: ENST00000475315.5

FXR1-211, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2

Gene FXR1, Length 2,341 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-211ENST00000475315 KIRREL3Q8IZU9 778 aa13.19□□□□□ -0.3
FXR1-211ENST00000475315 FBXO2Q9UK22 296 aaPredicted RBP13.19□□□□□ -0.3
FXR1-211ENST00000475315 PARP4Q9UKK3 1724 aaKnown RBP13.19□□□□□ -0.3
FXR1-211ENST00000475315 MAST3O60307 1309 aa13.19□□□□□ -0.3
FXR1-211ENST00000475315 ANO9A1A5B4 782 aa13.19□□□□□ -0.3
FXR1-211ENST00000475315 DNM1LO00429 736 aa13.19□□□□□ -0.3
FXR1-211ENST00000475315 PRC1O43663 620 aa13.19□□□□□ -0.3
FXR1-211ENST00000475315 HSF2BPO75031 334 aa13.19□□□□□ -0.3
FXR1-211ENST00000475315 FAM107AO95990 144 aa13.19□□□□□ -0.3
FXR1-211ENST00000475315 PTPREP23469 700 aa13.19□□□□□ -0.3
FXR1-211ENST00000475315 RFX5P48382 616 aaPredicted RBP13.19□□□□□ -0.3
FXR1-211ENST00000475315 SEC24CP53992 1094 aa13.19□□□□□ -0.3
FXR1-211ENST00000475315 STX17P56962 302 aa13.19□□□□□ -0.3
FXR1-211ENST00000475315 ITIH3Q06033 890 aa13.19□□□□□ -0.3
FXR1-211ENST00000475315 TRIM14Q14142 442 aa13.19□□□□□ -0.3
FXR1-211ENST00000475315 EPHA10Q5JZY3 1008 aa13.19□□□□□ -0.3
FXR1-211ENST00000475315 FAM43BQ6ZT52 329 aaPredicted RBP13.19□□□□□ -0.3
FXR1-211ENST00000475315 TTLL7Q6ZT98 887 aa13.19□□□□□ -0.3
FXR1-211ENST00000475315 AIDAQ96BJ3 306 aa13.19□□□□□ -0.3
FXR1-211ENST00000475315 HINFPQ9BQA5 517 aa13.19□□□□□ -0.3
FXR1-211ENST00000475315 LRRC1Q9BTT6 524 aa13.19□□□□□ -0.3
FXR1-211ENST00000475315 OSBPL7Q9BZF2 842 aa13.19□□□□□ -0.3
FXR1-211ENST00000475315 LIMA1Q9UHB6 759 aaKnown RBP13.19□□□□□ -0.3
FXR1-211ENST00000475315 TFR2Q9UP52 801 aa13.19□□□□□ -0.3
FXR1-211ENST00000475315 TNFRSF8P28908 595 aa13.18□□□□□ -0.3
FXR1-211ENST00000475315 SLC8A1P32418 973 aa13.18□□□□□ -0.3
FXR1-211ENST00000475315 KRT9P35527 623 aa13.18□□□□□ -0.3
FXR1-211ENST00000475315 TICAM2Q86XR7 235 aa13.18□□□□□ -0.3
FXR1-211ENST00000475315 IQCKQ8N0W5 287 aa13.18□□□□□ -0.3
FXR1-211ENST00000475315 CCDC114Q96M63 670 aa13.18□□□□□ -0.3
FXR1-211ENST00000475315 GOLGA6L7A0A1B0GV03 622 aa13.18□□□□□ -0.3
FXR1-211ENST00000475315 PPP1R3GB7ZBB8 358 aa13.18□□□□□ -0.3
FXR1-211ENST00000475315 MGRN1O60291 552 aa13.18□□□□□ -0.3
FXR1-211ENST00000475315 SKAP2O75563 359 aaPredicted RBP13.18□□□□□ -0.3
FXR1-211ENST00000475315 XRCC4Q13426 336 aa13.18□□□□□ -0.3
FXR1-211ENST00000475315 KRT31Q15323 416 aa13.18□□□□□ -0.3
FXR1-211ENST00000475315 E2F5Q15329 346 aa13.18□□□□□ -0.3
FXR1-211ENST00000475315 CCDC122Q5T0U0 273 aa13.18□□□□□ -0.3
FXR1-211ENST00000475315 KCTD16Q68DU8 428 aa13.18□□□□□ -0.3
FXR1-211ENST00000475315 KANK3Q6NY19 840 aa13.18□□□□□ -0.3
FXR1-211ENST00000475315 TMED8Q6PL24 325 aaPredicted RBP13.18□□□□□ -0.3
FXR1-211ENST00000475315 CREG2Q8IUH2 290 aa13.18□□□□□ -0.3
FXR1-211ENST00000475315 CAGE1Q8TC20 777 aa13.18□□□□□ -0.3
FXR1-211ENST00000475315 NUP88Q99567 741 aaPredicted RBP13.18□□□□□ -0.3
FXR1-211ENST00000475315 POLD4Q9HCU8 107 aa13.18□□□□□ -0.3
FXR1-211ENST00000475315 HAUS2Q9NVX0 235 aa13.18□□□□□ -0.3
FXR1-211ENST00000475315 BSDC1Q9NW68 430 aaPredicted RBP13.18□□□□□ -0.3
FXR1-211ENST00000475315 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.18□□□□□ -0.3
FXR1-211ENST00000475315 ZNF233A6NK53 670 aa13.17□□□□□ -0.3
FXR1-211ENST00000475315 FOXP2O15409 715 aa13.17□□□□□ -0.3
FXR1-211ENST00000475315 KRT14P02533 472 aa13.17□□□□□ -0.3
FXR1-211ENST00000475315 MDH1P40925 334 aaKnown RBP13.17□□□□□ -0.3
FXR1-211ENST00000475315 HDGFP51858 240 aaKnown RBP13.17□□□□□ -0.3
FXR1-211ENST00000475315 APBA1Q02410 837 aa13.17□□□□□ -0.3
FXR1-211ENST00000475315 NAA25Q14CX7 972 aa13.17□□□□□ -0.3
FXR1-211ENST00000475315 IQCEQ6IPM2 695 aa13.17□□□□□ -0.3
FXR1-211ENST00000475315 C1orf131Q8NDD1 294 aaKnown RBP13.17□□□□□ -0.3
FXR1-211ENST00000475315 PURBQ96QR8 312 aaKnown RBP13.17□□□□□ -0.3
FXR1-211ENST00000475315 RUFY1Q96T51 708 aa13.17□□□□□ -0.3
FXR1-211ENST00000475315 SH3GL3Q99963 347 aa13.17□□□□□ -0.3
FXR1-211ENST00000475315 LGR6Q9HBX8 967 aa13.17□□□□□ -0.3
FXR1-211ENST00000475315 CPDO75976 1380 aa13.17□□□□□ -0.3
FXR1-211ENST00000475315 IGKV5-2P06315 115 aa13.17□□□□□ -0.3
FXR1-211ENST00000475315 CCT6AP40227 531 aaKnown RBP13.17□□□□□ -0.3
FXR1-211ENST00000475315 TOB1P50616 345 aaPredicted RBP13.17□□□□□ -0.3
FXR1-211ENST00000475315 PTPN12Q05209 780 aaKnown RBP13.17□□□□□ -0.3
FXR1-211ENST00000475315 ANKRD20A8PQ5CZ79 823 aa13.17□□□□□ -0.3
FXR1-211ENST00000475315 KLHL10Q6JEL2 608 aa13.17□□□□□ -0.3
FXR1-211ENST00000475315 CCDC70Q6NSX1 233 aa13.17□□□□□ -0.3
FXR1-211ENST00000475315 NBPF10Q6P3W6 841 aaKnown RBP13.17□□□□□ -0.3
FXR1-211ENST00000475315 CD302Q8IX05 232 aa13.17□□□□□ -0.3
FXR1-211ENST00000475315 ZNF579Q8NAF0 562 aaKnown RBP13.17□□□□□ -0.3
FXR1-211ENST00000475315 EHBP1Q8NDI1 1231 aa13.17□□□□□ -0.3
FXR1-211ENST00000475315 HOOK2Q96ED9 719 aa13.17□□□□□ -0.3
FXR1-211ENST00000475315 CYFIP2Q96F07 1278 aa13.17□□□□□ -0.3
FXR1-211ENST00000475315 ETAA1Q9NY74 926 aa13.17□□□□□ -0.3
FXR1-211ENST00000475315 MYH13Q9UKX3 1938 aa13.16□□□□□ -0.3
FXR1-211ENST00000475315 PIK3C2AO00443 1686 aa13.16□□□□□ -0.3
FXR1-211ENST00000475315 LMO7Q8WWI1 1683 aa13.16□□□□□ -0.3
FXR1-211ENST00000475315 RCCD1A6NED2 376 aa13.16□□□□□ -0.3
FXR1-211ENST00000475315 CLSTN1O94985 981 aa13.16□□□□□ -0.3
FXR1-211ENST00000475315 NR1D1P20393 614 aa13.16□□□□□ -0.3
FXR1-211ENST00000475315 IFFO1Q0D2I5 559 aa13.16□□□□□ -0.3
FXR1-211ENST00000475315 DPYDQ12882 1025 aa13.16□□□□□ -0.3
FXR1-211ENST00000475315 LACTB2Q53H82 288 aaPredicted RBP13.16□□□□□ -0.3
FXR1-211ENST00000475315 CCDC121Q6ZUS5 278 aa13.16□□□□□ -0.3
FXR1-211ENST00000475315 RASSF8Q8NHQ8 419 aa13.16□□□□□ -0.3
FXR1-211ENST00000475315 CALR3Q96L12 384 aaKnown RBP13.16□□□□□ -0.3
FXR1-211ENST00000475315 SCLT1Q96NL6 688 aa13.16□□□□□ -0.3
FXR1-211ENST00000475315 BATF3Q9NR55 127 aa13.16□□□□□ -0.3
FXR1-211ENST00000475315 SPEF2Q9C093 1822 aa13.16□□□□□ -0.3
FXR1-211ENST00000475315 M0R2C6 588 aa13.16□□□□□ -0.3
FXR1-211ENST00000475315 PPP1R12BO60237 982 aaPredicted RBP13.16□□□□□ -0.3
FXR1-211ENST00000475315 SSBP05455 408 aaKnown RBP eCLIP13.16□□□□□ -0.3
FXR1-211ENST00000475315 COPB1P53618 953 aaKnown RBP13.16□□□□□ -0.3
FXR1-211ENST00000475315 ACCSLQ4AC99 568 aa13.16□□□□□ -0.3
FXR1-211ENST00000475315 WDR59Q6PJI9 974 aa13.16□□□□□ -0.3
FXR1-211ENST00000475315 SH3RF1Q7Z6J0 888 aa13.16□□□□□ -0.3
FXR1-211ENST00000475315 PIK3R5Q8WYR1 880 aa13.16□□□□□ -0.3
FXR1-211ENST00000475315 DNAJC7Q99615 494 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms