RNA–Protein interactions for RNA: ENST00000475302.1

ITGA6-210, Transcript of integrin subunit alpha 6, humanhuman

TSL 3

Gene ITGA6, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-210ENST00000475302 FUT2Q10981 343 aa11.3□□□□□ -0.6
ITGA6-210ENST00000475302 TROAPQ12815 778 aa11.3□□□□□ -0.6
ITGA6-210ENST00000475302 RESTQ13127 1097 aa11.3□□□□□ -0.6
ITGA6-210ENST00000475302 RRP12Q5JTH9 1297 aaKnown RBP11.3□□□□□ -0.6
ITGA6-210ENST00000475302 FOXD4L5Q5VV16 416 aaPredicted RBP11.3□□□□□ -0.6
ITGA6-210ENST00000475302 C16orf86Q6ZW13 317 aa11.3□□□□□ -0.6
ITGA6-210ENST00000475302 NBPF11Q86T75 865 aa11.3□□□□□ -0.6
ITGA6-210ENST00000475302 MAPKAPK5Q8IW41 473 aa11.3□□□□□ -0.6
ITGA6-210ENST00000475302 TEX11Q8IYF3 940 aa11.3□□□□□ -0.6
ITGA6-210ENST00000475302 STK11IPQ8N1F8 1099 aa11.3□□□□□ -0.6
ITGA6-210ENST00000475302 FOXD4L4Q8WXT5 416 aaPredicted RBP11.3□□□□□ -0.6
ITGA6-210ENST00000475302 DDX11Q96FC9 970 aa11.3□□□□□ -0.6
ITGA6-210ENST00000475302 NOL10Q9BSC4 688 aaKnown RBP11.3□□□□□ -0.6
ITGA6-210ENST00000475302 DDX4Q9NQI0 724 aaKnown RBP11.3□□□□□ -0.6
ITGA6-210ENST00000475302 TNKSO95271 1327 aa11.3□□□□□ -0.6
ITGA6-210ENST00000475302 PPIP5K2O43314 1243 aa11.29□□□□□ -0.6
ITGA6-210ENST00000475302 VIL1P09327 827 aaKnown RBP11.29□□□□□ -0.6
ITGA6-210ENST00000475302 IFNAR1P17181 557 aa11.29□□□□□ -0.6
ITGA6-210ENST00000475302 RASA1P20936 1047 aa11.29□□□□□ -0.6
ITGA6-210ENST00000475302 PTMSP20962 102 aa11.29□□□□□ -0.6
ITGA6-210ENST00000475302 POLD1P28340 1107 aa11.29□□□□□ -0.6
ITGA6-210ENST00000475302 METAP2P50579 478 aaKnown RBP eCLIP11.29□□□□□ -0.6
ITGA6-210ENST00000475302 SCNN1DP51172 638 aa11.29□□□□□ -0.6
ITGA6-210ENST00000475302 PDE4BQ07343 736 aa11.29□□□□□ -0.6
ITGA6-210ENST00000475302 WTAPQ15007 396 aa11.29□□□□□ -0.6
ITGA6-210ENST00000475302 SOGA3Q5TF21 947 aa11.29□□□□□ -0.6
ITGA6-210ENST00000475302 MCTP1Q6DN14 999 aa11.29□□□□□ -0.6
ITGA6-210ENST00000475302 BLOC1S3Q6QNY0 202 aa11.29□□□□□ -0.6
ITGA6-210ENST00000475302 RAB11FIP4Q86YS3 637 aa11.29□□□□□ -0.6
ITGA6-210ENST00000475302 ZNF654Q8IZM8 581 aa11.29□□□□□ -0.6
ITGA6-210ENST00000475302 FANCBQ8NB91 859 aa11.29□□□□□ -0.6
ITGA6-210ENST00000475302 RDH13Q8NBN7 331 aa11.29□□□□□ -0.6
ITGA6-210ENST00000475302 TEKT1Q969V4 418 aa11.29□□□□□ -0.6
ITGA6-210ENST00000475302 MYL10Q9BUA6 226 aa11.29□□□□□ -0.6
ITGA6-210ENST00000475302 IDI2Q9BXS1 227 aa11.29□□□□□ -0.6
ITGA6-210ENST00000475302 SERPINA10Q9UK55 444 aa11.29□□□□□ -0.6
ITGA6-210ENST00000475302 PCDHB3Q9Y5E6 796 aa11.29□□□□□ -0.6
ITGA6-210ENST00000475302 PCDHAC2Q9Y5I4 1007 aa11.29□□□□□ -0.6
ITGA6-210ENST00000475302 SLC12A7Q9Y666 1083 aa11.29□□□□□ -0.6
ITGA6-210ENST00000475302 STK36Q9NRP7 1315 aa11.29□□□□□ -0.6
ITGA6-210ENST00000475302 ECM29Q5VYK3 1845 aa11.28□□□□□ -0.6
ITGA6-210ENST00000475302 F8W031 263 aaPredicted RBP11.28□□□□□ -0.6
ITGA6-210ENST00000475302 ACTN4O43707 911 aaKnown RBP11.28□□□□□ -0.6
ITGA6-210ENST00000475302 NMT2O60551 498 aa11.28□□□□□ -0.6
ITGA6-210ENST00000475302 SLC3A2P08195 630 aaKnown RBP11.28□□□□□ -0.6
ITGA6-210ENST00000475302 RXRAP19793 462 aa11.28□□□□□ -0.6
ITGA6-210ENST00000475302 CDK8P49336 464 aa11.28□□□□□ -0.6
ITGA6-210ENST00000475302 MDM2Q00987 491 aaPredicted RBP11.28□□□□□ -0.6
ITGA6-210ENST00000475302 SART3Q15020 963 aaKnown RBP11.28□□□□□ -0.6
ITGA6-210ENST00000475302 PPP2R5BQ15173 497 aa11.28□□□□□ -0.6
ITGA6-210ENST00000475302 KLHL40Q2TBA0 621 aa11.28□□□□□ -0.6
ITGA6-210ENST00000475302 SKOR2Q2VWA4 1001 aaPredicted RBP11.28□□□□□ -0.6
ITGA6-210ENST00000475302 KMT5BQ4FZB7 885 aa11.28□□□□□ -0.6
ITGA6-210ENST00000475302 FAM47AQ5JRC9 791 aa11.28□□□□□ -0.6
ITGA6-210ENST00000475302 DGKHQ86XP1 1220 aa11.28□□□□□ -0.6
ITGA6-210ENST00000475302 KRI1Q8N9T8 703 aaKnown RBP11.28□□□□□ -0.6
ITGA6-210ENST00000475302 SLC44A5Q8NCS7 719 aa11.28□□□□□ -0.6
ITGA6-210ENST00000475302 FBXO18Q8NFZ0 1043 aa11.28□□□□□ -0.6
ITGA6-210ENST00000475302 GPT2Q8TD30 523 aa11.28□□□□□ -0.6
ITGA6-210ENST00000475302 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.28□□□□□ -0.6
ITGA6-210ENST00000475302 PRR14Q9BWN1 585 aa11.28□□□□□ -0.6
ITGA6-210ENST00000475302 USP40Q9NVE5 1235 aa11.28□□□□□ -0.6
ITGA6-210ENST00000475302 MYH1P12882 1939 aa11.27□□□□□ -0.6
ITGA6-210ENST00000475302 IGKV6D-41A0A0C4DH26 115 aa11.27□□□□□ -0.61
ITGA6-210ENST00000475302 CCDC69A6NI79 296 aa11.27□□□□□ -0.61
ITGA6-210ENST00000475302 GOLGA8AA7E2F4 631 aa11.27□□□□□ -0.61
ITGA6-210ENST00000475302 NFKBIEO00221 500 aa11.27□□□□□ -0.61
ITGA6-210ENST00000475302 PRPF40AO75400 957 aaKnown RBP11.27□□□□□ -0.61
ITGA6-210ENST00000475302 PRELPP51888 382 aa11.27□□□□□ -0.61
ITGA6-210ENST00000475302 TFAP4Q01664 338 aa11.27□□□□□ -0.61
ITGA6-210ENST00000475302 DNM1Q05193 864 aaKnown RBP11.27□□□□□ -0.61
ITGA6-210ENST00000475302 NFIAQ12857 509 aa11.27□□□□□ -0.61
ITGA6-210ENST00000475302 DALRD3Q5D0E6 543 aaKnown RBP11.27□□□□□ -0.61
ITGA6-210ENST00000475302 METTL16Q86W50 562 aaKnown RBP11.27□□□□□ -0.61
ITGA6-210ENST00000475302 KIAA0825Q8IV33 1275 aa11.27□□□□□ -0.61
ITGA6-210ENST00000475302 ZFPM1Q8IX07 1006 aa11.27□□□□□ -0.61
ITGA6-210ENST00000475302 NEDD1Q8NHV4 660 aa11.27□□□□□ -0.61
ITGA6-210ENST00000475302 ZBED3Q96IU2 234 aaPredicted RBP11.27□□□□□ -0.61
ITGA6-210ENST00000475302 UBAC1Q9BSL1 405 aa11.27□□□□□ -0.61
ITGA6-210ENST00000475302 OSBPL5Q9H0X9 879 aaPredicted RBP11.27□□□□□ -0.61
ITGA6-210ENST00000475302 ZNF277Q9NRM2 450 aaPredicted RBP11.27□□□□□ -0.61
ITGA6-210ENST00000475302 TOMM22Q9NS69 142 aa11.27□□□□□ -0.61
ITGA6-210ENST00000475302 ORC3Q9UBD5 711 aaPredicted RBP11.27□□□□□ -0.61
ITGA6-210ENST00000475302 SAP30BPQ9UHR5 308 aaKnown RBP11.27□□□□□ -0.61
ITGA6-210ENST00000475302 CNPY2Q9Y2B0 182 aa11.27□□□□□ -0.61
ITGA6-210ENST00000475302 ATP6V1DQ9Y5K8 247 aa11.27□□□□□ -0.61
ITGA6-210ENST00000475302 SIPA1L1O43166 1804 aa11.27□□□□□ -0.61
ITGA6-210ENST00000475302 LTBP3Q9NS15 1303 aa11.27□□□□□ -0.61
ITGA6-210ENST00000475302 PLIN4Q96Q06 1357 aa11.27□□□□□ -0.61
ITGA6-210ENST00000475302 VPS37CA5D8V6 355 aaPredicted RBP11.26□□□□□ -0.61
ITGA6-210ENST00000475302 UBE2Q2LH0YL09 131 aa11.26□□□□□ -0.61
ITGA6-210ENST00000475302 PPFIA3O75145 1194 aa11.26□□□□□ -0.61
ITGA6-210ENST00000475302 DDAH1O94760 285 aa11.26□□□□□ -0.61
ITGA6-210ENST00000475302 FMNL1O95466 1100 aaPredicted RBP11.26□□□□□ -0.61
ITGA6-210ENST00000475302 POLR3DP05423 398 aaPredicted RBP11.26□□□□□ -0.61
ITGA6-210ENST00000475302 IARSP41252 1262 aaKnown RBP11.26□□□□□ -0.61
ITGA6-210ENST00000475302 FAM173BQ6P4H8 233 aa11.26□□□□□ -0.61
ITGA6-210ENST00000475302 RSBN1LQ6PCB5 846 aaPredicted RBP11.26□□□□□ -0.61
ITGA6-210ENST00000475302 NFXL1Q6ZNB6 911 aa11.26□□□□□ -0.61
ITGA6-210ENST00000475302 SH3BP5LQ7L8J4 393 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms