RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 CCDC94Q9BW85 323 aaPredicted RBP12.14□□□□□ -0.47
VAPB-204ENST00000475243 NEDD9Q14511 834 aa12.14□□□□□ -0.47
VAPB-204ENST00000475243 SERTAD1Q9UHV2 236 aa12.14□□□□□ -0.47
VAPB-204ENST00000475243 UNC13AQ9UPW8 1703 aa12.14□□□□□ -0.47
VAPB-204ENST00000475243 SATB1Q01826 763 aa12.14□□□□□ -0.47
VAPB-204ENST00000475243 PRR16Q569H4 304 aa12.14□□□□□ -0.47
VAPB-204ENST00000475243 LSM14BQ9BX40 385 aaKnown RBP12.14□□□□□ -0.47
VAPB-204ENST00000475243 SBNO1A3KN83 1393 aa12.14□□□□□ -0.47
VAPB-204ENST00000475243 ME3Q16798 604 aa12.14□□□□□ -0.47
VAPB-204ENST00000475243 SCYL2Q6P3W7 929 aa12.14□□□□□ -0.47
VAPB-204ENST00000475243 NSMCE1Q8WV22 266 aa12.14□□□□□ -0.47
VAPB-204ENST00000475243 GOLGA8HP0CJ92 632 aa12.13□□□□□ -0.47
VAPB-204ENST00000475243 KRT15P19012 456 aa12.13□□□□□ -0.47
VAPB-204ENST00000475243 CNGA1P29973 690 aa12.13□□□□□ -0.47
VAPB-204ENST00000475243 ALDH1B1P30837 517 aa12.13□□□□□ -0.47
VAPB-204ENST00000475243 BCAMP50895 628 aa12.13□□□□□ -0.47
VAPB-204ENST00000475243 PPARAQ07869 468 aa12.13□□□□□ -0.47
VAPB-204ENST00000475243 GADL1Q6ZQY3 521 aa12.13□□□□□ -0.47
VAPB-204ENST00000475243 NEURL1BA8MQ27 555 aa12.13□□□□□ -0.47
VAPB-204ENST00000475243 RFX1P22670 979 aa12.13□□□□□ -0.47
VAPB-204ENST00000475243 GSDMBQ8TAX9 411 aa12.13□□□□□ -0.47
VAPB-204ENST00000475243 SWAP70Q9UH65 585 aa12.13□□□□□ -0.47
VAPB-204ENST00000475243 FAM184BQ9ULE4 1060 aa12.13□□□□□ -0.47
VAPB-204ENST00000475243 BCS1LQ9Y276 419 aa12.13□□□□□ -0.47
VAPB-204ENST00000475243 TTC36A6NLP5 189 aa12.13□□□□□ -0.47
VAPB-204ENST00000475243 ADAT2Q7Z6V5 191 aaKnown RBP12.13□□□□□ -0.47
VAPB-204ENST00000475243 KIAA0825Q8IV33 1275 aa12.13□□□□□ -0.47
VAPB-204ENST00000475243 ERO1AQ96HE7 468 aa12.13□□□□□ -0.47
VAPB-204ENST00000475243 BEGAINQ9BUH8 593 aa12.13□□□□□ -0.47
VAPB-204ENST00000475243 ALAS1P13196 640 aa12.13□□□□□ -0.47
VAPB-204ENST00000475243 RPS6KA1Q15418 735 aa12.13□□□□□ -0.47
VAPB-204ENST00000475243 EEF2KMTQ96G04 330 aa12.13□□□□□ -0.47
VAPB-204ENST00000475243 MMS19Q96T76 1030 aa12.13□□□□□ -0.47
VAPB-204ENST00000475243 KDM2BQ8NHM5 1336 aa12.13□□□□□ -0.47
VAPB-204ENST00000475243 HHATQ5VTY9 493 aa12.13□□□□□ -0.47
VAPB-204ENST00000475243 OTUD6AQ7L8S5 288 aa12.13□□□□□ -0.47
VAPB-204ENST00000475243 TEKT1Q969V4 418 aa12.13□□□□□ -0.47
VAPB-204ENST00000475243 TRPC6Q9Y210 931 aa12.13□□□□□ -0.47
VAPB-204ENST00000475243 KCNQ3O43525 872 aa12.13□□□□□ -0.47
VAPB-204ENST00000475243 ZNF654Q8IZM8 581 aa12.13□□□□□ -0.47
VAPB-204ENST00000475243 MLXIPQ9HAP2 919 aa12.13□□□□□ -0.47
VAPB-204ENST00000475243 TSPOAP1O95153 1857 aa12.12□□□□□ -0.47
VAPB-204ENST00000475243 NR1I2O75469 434 aa12.12□□□□□ -0.47
VAPB-204ENST00000475243 FLOT1O75955 427 aa12.12□□□□□ -0.47
VAPB-204ENST00000475243 GPBP1Q86WP2 473 aa12.12□□□□□ -0.47
VAPB-204ENST00000475243 LZTS2Q9BRK4 669 aa12.12□□□□□ -0.47
VAPB-204ENST00000475243 YARSP54577 528 aaKnown RBP12.12□□□□□ -0.47
VAPB-204ENST00000475243 OGFRQ9NZT2 677 aa12.12□□□□□ -0.47
VAPB-204ENST00000475243 PCDHA12Q9UN75 941 aa12.12□□□□□ -0.47
VAPB-204ENST00000475243 PIK3C2GO75747 1445 aa12.12□□□□□ -0.47
VAPB-204ENST00000475243 CEP128Q6ZU80 1094 aa12.12□□□□□ -0.47
VAPB-204ENST00000475243 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.12□□□□□ -0.47
VAPB-204ENST00000475243 RILPQ96NA2 401 aa12.12□□□□□ -0.47
VAPB-204ENST00000475243 PPP1R12CQ9BZL4 782 aa12.12□□□□□ -0.47
VAPB-204ENST00000475243 CHL1O00533 1208 aa12.12□□□□□ -0.47
VAPB-204ENST00000475243 RPS8P62241 208 aaKnown RBP12.12□□□□□ -0.47
VAPB-204ENST00000475243 CUL4BQ13620 913 aa12.12□□□□□ -0.47
VAPB-204ENST00000475243 ERCC6LQ2NKX8 1250 aa12.12□□□□□ -0.47
VAPB-204ENST00000475243 DEPTORQ8TB45 409 aa12.12□□□□□ -0.47
VAPB-204ENST00000475243 IFIH1Q9BYX4 1025 aaKnown RBP12.12□□□□□ -0.47
VAPB-204ENST00000475243 THRAP3Q9Y2W1 955 aaKnown RBP12.12□□□□□ -0.47
VAPB-204ENST00000475243 TUBBP07437 444 aa12.12□□□□□ -0.47
VAPB-204ENST00000475243 HS1BP3Q53T59 392 aa12.12□□□□□ -0.47
VAPB-204ENST00000475243 CSADQ9Y600 493 aa12.12□□□□□ -0.47
VAPB-204ENST00000475243 VPS41P49754 854 aa12.12□□□□□ -0.47
VAPB-204ENST00000475243 GUCY2FP51841 1108 aa12.12□□□□□ -0.47
VAPB-204ENST00000475243 MIER3Q7Z3K6 550 aa12.12□□□□□ -0.47
VAPB-204ENST00000475243 PPFIBP2Q8ND30 876 aa12.12□□□□□ -0.47
VAPB-204ENST00000475243 U2AF1L4Q8WU68 220 aaKnown RBP12.12□□□□□ -0.47
VAPB-204ENST00000475243 GOLGA6BA6NDN3 693 aa12.11□□□□□ -0.47
VAPB-204ENST00000475243 TCIRG1Q13488 830 aa12.11□□□□□ -0.47
VAPB-204ENST00000475243 CFAP221Q4G0U5 840 aa12.11□□□□□ -0.47
VAPB-204ENST00000475243 TMTC1Q8IUR5 882 aa12.11□□□□□ -0.47
VAPB-204ENST00000475243 CDCA7Q9BWT1 371 aaPredicted RBP12.11□□□□□ -0.47
VAPB-204ENST00000475243 PSTPIP2Q9H939 334 aa12.11□□□□□ -0.47
VAPB-204ENST00000475243 IFNB1P01574 187 aa12.11□□□□□ -0.47
VAPB-204ENST00000475243 PCK1P35558 622 aa12.11□□□□□ -0.47
VAPB-204ENST00000475243 SESTD1Q86VW0 696 aa12.11□□□□□ -0.47
VAPB-204ENST00000475243 RSAD2Q8WXG1 361 aa12.11□□□□□ -0.47
VAPB-204ENST00000475243 GPKOWQ92917 476 aaPredicted RBP eCLIP12.11□□□□□ -0.47
VAPB-204ENST00000475243 HINFPQ9BQA5 517 aa12.11□□□□□ -0.47
VAPB-204ENST00000475243 STK24Q9Y6E0 443 aa12.11□□□□□ -0.47
VAPB-204ENST00000475243 COBLO75128 1261 aa12.11□□□□□ -0.47
VAPB-204ENST00000475243 CAPN12Q6ZSI9 719 aa12.11□□□□□ -0.47
VAPB-204ENST00000475243 TTLL7Q6ZT98 887 aa12.11□□□□□ -0.47
VAPB-204ENST00000475243 B4GALNT4Q76KP1 1039 aa12.11□□□□□ -0.47
VAPB-204ENST00000475243 TAOK1Q7L7X3 1001 aa12.11□□□□□ -0.47
VAPB-204ENST00000475243 CSPG5O95196 566 aa12.11□□□□□ -0.47
VAPB-204ENST00000475243 KRT81Q14533 505 aa12.11□□□□□ -0.47
VAPB-204ENST00000475243 LONRF2Q1L5Z9 754 aa12.11□□□□□ -0.47
VAPB-204ENST00000475243 DENND2CQ68D51 928 aa12.11□□□□□ -0.47
VAPB-204ENST00000475243 CCDC170Q8IYT3 715 aa12.11□□□□□ -0.47
VAPB-204ENST00000475243 SUGCTQ9HAC7 445 aa12.11□□□□□ -0.47
VAPB-204ENST00000475243 TBC1D10BQ4KMP7 808 aaPredicted RBP12.11□□□□□ -0.47
VAPB-204ENST00000475243 C4orf50Q6ZRC1 276 aa12.11□□□□□ -0.47
VAPB-204ENST00000475243 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.11□□□□□ -0.47
VAPB-204ENST00000475243 SUPT20HQ8NEM7 779 aa12.11□□□□□ -0.47
VAPB-204ENST00000475243 SEPT10Q9P0V9 454 aa12.11□□□□□ -0.47
VAPB-204ENST00000475243 EDC4Q6P2E9 1401 aaKnown RBP12.11□□□□□ -0.47
VAPB-204ENST00000475243 DLATP10515 647 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms