RNA–Protein interactions for RNA: ENST00000475213.1

SSR1-205, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3

Gene SSR1, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-205ENST00000475213 SHISA4Q96DD7 197 aa14.69□□□□□ -0.06
SSR1-205ENST00000475213 CCDC17Q96LX7 622 aa14.69□□□□□ -0.06
SSR1-205ENST00000475213 UNC93B1Q9H1C4 597 aa14.69□□□□□ -0.06
SSR1-205ENST00000475213 TSPYL2Q9H2G4 693 aaPredicted RBP14.69□□□□□ -0.06
SSR1-205ENST00000475213 RPAP3Q9H6T3 665 aaPredicted RBP14.69□□□□□ -0.06
SSR1-205ENST00000475213 ARPP21Q9UBL0 812 aaPredicted RBP14.69□□□□□ -0.06
SSR1-205ENST00000475213 ZBTB47Q9UFB7 747 aaPredicted RBP14.69□□□□□ -0.06
SSR1-205ENST00000475213 GALR2O43603 387 aaPredicted RBP14.68□□□□□ -0.06
SSR1-205ENST00000475213 CNMDO75829 334 aa14.68□□□□□ -0.06
SSR1-205ENST00000475213 GJB1P08034 283 aa14.68□□□□□ -0.06
SSR1-205ENST00000475213 ICA1Q05084 483 aa14.68□□□□□ -0.06
SSR1-205ENST00000475213 AAMPQ13685 434 aa14.68□□□□□ -0.06
SSR1-205ENST00000475213 LRRFIP1Q32MZ4 808 aaKnown RBP14.68□□□□□ -0.06
SSR1-205ENST00000475213 SBK1Q52WX2 424 aa14.68□□□□□ -0.06
SSR1-205ENST00000475213 KIAA1755Q5JYT7 1200 aa14.68□□□□□ -0.06
SSR1-205ENST00000475213 PRPF38BQ5VTL8 546 aaKnown RBP14.68□□□□□ -0.06
SSR1-205ENST00000475213 GIMAP6Q6P9H5 292 aa14.68□□□□□ -0.06
SSR1-205ENST00000475213 CLEC10AQ8IUN9 316 aa14.68□□□□□ -0.06
SSR1-205ENST00000475213 SIAH1Q8IUQ4 282 aa14.68□□□□□ -0.06
SSR1-205ENST00000475213 FSD1Q9BTV5 496 aa14.68□□□□□ -0.06
SSR1-205ENST00000475213 PORCNQ9H237 461 aa14.68□□□□□ -0.06
SSR1-205ENST00000475213 RABGAP1Q9Y3P9 1069 aa14.68□□□□□ -0.06
SSR1-205ENST00000475213 GREB1LQ9C091 1923 aaPredicted RBP14.68□□□□□ -0.06
SSR1-205ENST00000475213 PARP14Q460N5 1801 aa14.67□□□□□ -0.06
SSR1-205ENST00000475213 SPDYE16A6NNV3 312 aaPredicted RBP14.67□□□□□ -0.06
SSR1-205ENST00000475213 GNAT2P19087 354 aa14.67□□□□□ -0.06
SSR1-205ENST00000475213 MAPK4P31152 587 aa14.67□□□□□ -0.06
SSR1-205ENST00000475213 GJA8P48165 433 aa14.67□□□□□ -0.06
SSR1-205ENST00000475213 LBX2Q6XYB7 198 aa14.67□□□□□ -0.06
SSR1-205ENST00000475213 NKX2-3Q8TAU0 364 aa14.67□□□□□ -0.06
SSR1-205ENST00000475213 SEC62Q99442 399 aaKnown RBP14.67□□□□□ -0.06
SSR1-205ENST00000475213 ARHGEF10LQ9HCE6 1279 aa14.67□□□□□ -0.06
SSR1-205ENST00000475213 EPB41L4AQ9HCS5 686 aaPredicted RBP14.67□□□□□ -0.06
SSR1-205ENST00000475213 MINDY4BA8MYZ0 360 aa14.66□□□□□ -0.06
SSR1-205ENST00000475213 PATL2C9JE40 543 aaKnown RBP14.66□□□□□ -0.06
SSR1-205ENST00000475213 CYP2B6P20813 491 aa14.66□□□□□ -0.06
SSR1-205ENST00000475213 GPR142Q7Z601 462 aa14.66□□□□□ -0.06
SSR1-205ENST00000475213 CCAR1Q8IX12 1150 aaKnown RBP14.66□□□□□ -0.06
SSR1-205ENST00000475213 STK11IPQ8N1F8 1099 aa14.66□□□□□ -0.06
SSR1-205ENST00000475213 NUDT12Q9BQG2 462 aa14.66□□□□□ -0.06
SSR1-205ENST00000475213 BTBD7Q9P203 1132 aa14.66□□□□□ -0.06
SSR1-205ENST00000475213 STAP2Q9UGK3 403 aa14.66□□□□□ -0.06
SSR1-205ENST00000475213 TMX2Q9Y320 296 aa14.66□□□□□ -0.06
SSR1-205ENST00000475213 ROBO3Q96MS0 1386 aa14.65□□□□□ -0.06
SSR1-205ENST00000475213 SGPL1O95470 568 aa14.65□□□□□ -0.06
SSR1-205ENST00000475213 HMGCRP04035 888 aa14.65□□□□□ -0.06
SSR1-205ENST00000475213 APPP05067 770 aa14.65□□□□□ -0.06
SSR1-205ENST00000475213 EEF2P13639 858 aaKnown RBP14.65□□□□□ -0.06
SSR1-205ENST00000475213 TDO2P48775 406 aa14.65□□□□□ -0.06
SSR1-205ENST00000475213 PDE1AP54750 535 aa14.65□□□□□ -0.06
SSR1-205ENST00000475213 CCNA1P78396 465 aa14.65□□□□□ -0.06
SSR1-205ENST00000475213 COG2Q14746 738 aa14.65□□□□□ -0.06
SSR1-205ENST00000475213 ZMYM1Q5SVZ6 1142 aa14.65□□□□□ -0.06
SSR1-205ENST00000475213 PLEKHH3Q7Z736 793 aa14.65□□□□□ -0.06
SSR1-205ENST00000475213 EXOC6Q8TAG9 804 aa14.65□□□□□ -0.06
SSR1-205ENST00000475213 U2AF1L4Q8WU68 220 aaKnown RBP14.65□□□□□ -0.06
SSR1-205ENST00000475213 SOCS4Q8WXH5 440 aa14.65□□□□□ -0.06
SSR1-205ENST00000475213 LPAR1Q92633 364 aa14.65□□□□□ -0.06
SSR1-205ENST00000475213 USP6NLQ92738 828 aa14.65□□□□□ -0.06
SSR1-205ENST00000475213 TANGO6Q9C0B7 1094 aa14.65□□□□□ -0.06
SSR1-205ENST00000475213 SH2D4AQ9H788 454 aa14.65□□□□□ -0.06
SSR1-205ENST00000475213 VCPKMTQ9H867 229 aa14.65□□□□□ -0.06
SSR1-205ENST00000475213 KANSL2Q9H9L4 492 aa14.65□□□□□ -0.06
SSR1-205ENST00000475213 PAK6Q9NQU5 681 aaPredicted RBP14.65□□□□□ -0.06
SSR1-205ENST00000475213 CEP290O15078 2479 aa14.65□□□□□ -0.06
SSR1-205ENST00000475213 MYH4Q9Y623 1939 aa14.64□□□□□ -0.07
SSR1-205ENST00000475213 COL11A1P12107 1806 aaPredicted RBP14.64□□□□□ -0.07
SSR1-205ENST00000475213 A0A0G2JMZ2 1700 aa14.64□□□□□ -0.07
SSR1-205ENST00000475213 XRCC5P13010 732 aaKnown RBP14.64□□□□□ -0.07
SSR1-205ENST00000475213 RASA1P20936 1047 aa14.64□□□□□ -0.07
SSR1-205ENST00000475213 ATP2B2Q01814 1243 aa14.64□□□□□ -0.07
SSR1-205ENST00000475213 TRIM32Q13049 653 aa14.64□□□□□ -0.07
SSR1-205ENST00000475213 MORN1Q5T089 497 aa14.64□□□□□ -0.07
SSR1-205ENST00000475213 RASEFQ8IZ41 740 aa14.64□□□□□ -0.07
SSR1-205ENST00000475213 IFNL3Q8IZI9 196 aa14.64□□□□□ -0.07
SSR1-205ENST00000475213 SPICE1Q8N0Z3 855 aa14.64□□□□□ -0.07
SSR1-205ENST00000475213 TRIB2Q92519 343 aa14.64□□□□□ -0.07
SSR1-205ENST00000475213 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.64□□□□□ -0.07
SSR1-205ENST00000475213 RWDD1Q9H446 243 aaPredicted RBP14.64□□□□□ -0.07
SSR1-205ENST00000475213 MKNK2Q9HBH9 465 aa14.64□□□□□ -0.07
SSR1-205ENST00000475213 HOXC10Q9NYD6 342 aa14.64□□□□□ -0.07
SSR1-205ENST00000475213 UBE2Q1Q7Z7E8 422 aa14.63□□□□□ -0.07
SSR1-205ENST00000475213 SMC5Q8IY18 1101 aa14.63□□□□□ -0.07
SSR1-205ENST00000475213 EVI5LQ96CN4 794 aa14.63□□□□□ -0.07
SSR1-205ENST00000475213 DEFB118Q96PH6 123 aa14.63□□□□□ -0.07
SSR1-205ENST00000475213 LNPKQ9C0E8 428 aa14.63□□□□□ -0.07
SSR1-205ENST00000475213 CWC22Q9HCG8 908 aaKnown RBP14.63□□□□□ -0.07
SSR1-205ENST00000475213 WDR46O15213 610 aaKnown RBP14.62□□□□□ -0.07
SSR1-205ENST00000475213 IGHDP01880 384 aa14.62□□□□□ -0.07
SSR1-205ENST00000475213 RGS2P41220 211 aa14.62□□□□□ -0.07
SSR1-205ENST00000475213 WDR78Q5VTH9 848 aa14.62□□□□□ -0.07
SSR1-205ENST00000475213 B4GALNT3Q6L9W6 998 aa14.62□□□□□ -0.07
SSR1-205ENST00000475213 CCDC129Q6ZRS4 1044 aa14.62□□□□□ -0.07
SSR1-205ENST00000475213 NACAP1Q9BZK3 213 aa14.62□□□□□ -0.07
SSR1-205ENST00000475213 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.62□□□□□ -0.07
SSR1-205ENST00000475213 ZNFX1Q9P2E3 1918 aaKnown RBP14.62□□□□□ -0.07
SSR1-205ENST00000475213 RPTORQ8N122 1335 aa14.62□□□□□ -0.07
SSR1-205ENST00000475213 PRDM1O75626 825 aa14.61□□□□□ -0.07
SSR1-205ENST00000475213 FLOT1O75955 427 aa14.61□□□□□ -0.07
SSR1-205ENST00000475213 TFRCP02786 760 aaKnown RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms