RNA–Protein interactions for RNA: ENST00000475184.5

ITGB1-211, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-211ENST00000475184 TTC6Q86TZ1 520 aa19.39■□□□□ 0.69
ITGB1-211ENST00000475184 MYLIPQ8WY64 445 aa19.39■□□□□ 0.69
ITGB1-211ENST00000475184 MOV10L1Q9BXT6 1211 aaKnown RBP19.39■□□□□ 0.69
ITGB1-211ENST00000475184 PDLIM7Q9NR12 457 aa19.39■□□□□ 0.69
ITGB1-211ENST00000475184 SEPT4O43236 478 aa19.38■□□□□ 0.69
ITGB1-211ENST00000475184 MYCNP04198 464 aaPredicted RBP19.38■□□□□ 0.69
ITGB1-211ENST00000475184 SHMT1P34896 483 aa19.38■□□□□ 0.69
ITGB1-211ENST00000475184 POLA2Q14181 598 aa19.38■□□□□ 0.69
ITGB1-211ENST00000475184 MAGEB6Q8N7X4 407 aa19.38■□□□□ 0.69
ITGB1-211ENST00000475184 TTYH1Q9H313 450 aaPredicted RBP19.38■□□□□ 0.69
ITGB1-211ENST00000475184 DBNLQ9UJU6 430 aaKnown RBP19.38■□□□□ 0.69
ITGB1-211ENST00000475184 TNNQ9UQP3 1299 aa19.38■□□□□ 0.69
ITGB1-211ENST00000475184 GUCY1A2P33402 732 aa19.37■□□□□ 0.69
ITGB1-211ENST00000475184 SPATC1LQ9H0A9 340 aa19.37■□□□□ 0.69
ITGB1-211ENST00000475184 TLR7Q9NYK1 1049 aaKnown RBP19.37■□□□□ 0.69
ITGB1-211ENST00000475184 ERCC3P19447 782 aa19.36■□□□□ 0.69
ITGB1-211ENST00000475184 ADCYAP1R1P41586 468 aa19.36■□□□□ 0.69
ITGB1-211ENST00000475184 PLCD1P51178 756 aa19.36■□□□□ 0.69
ITGB1-211ENST00000475184 COG2Q14746 738 aa19.36■□□□□ 0.69
ITGB1-211ENST00000475184 SH3RF1Q7Z6J0 888 aa19.36■□□□□ 0.69
ITGB1-211ENST00000475184 SHCBP1Q8NEM2 672 aa19.36■□□□□ 0.69
ITGB1-211ENST00000475184 SSH3Q8TE77 659 aa19.36■□□□□ 0.69
ITGB1-211ENST00000475184 CLUAP1Q96AJ1 413 aa19.36■□□□□ 0.69
ITGB1-211ENST00000475184 TANGO6Q9C0B7 1094 aa19.36■□□□□ 0.69
ITGB1-211ENST00000475184 PRDM6Q9NQX0 595 aa19.36■□□□□ 0.69
ITGB1-211ENST00000475184 HOXC10Q9NYD6 342 aa19.36■□□□□ 0.69
ITGB1-211ENST00000475184 TRIM43BA6NCK2 446 aa19.35■□□□□ 0.69
ITGB1-211ENST00000475184 COBLO75128 1261 aa19.35■□□□□ 0.69
ITGB1-211ENST00000475184 SURF6O75683 361 aaKnown RBP19.35■□□□□ 0.69
ITGB1-211ENST00000475184 FOSL2P15408 326 aa19.35■□□□□ 0.69
ITGB1-211ENST00000475184 SEPT2Q15019 361 aa19.35■□□□□ 0.69
ITGB1-211ENST00000475184 LRRC41Q15345 812 aa19.35■□□□□ 0.69
ITGB1-211ENST00000475184 C1orf53Q5VUE5 145 aa19.35■□□□□ 0.69
ITGB1-211ENST00000475184 FRAT1Q92837 279 aaPredicted RBP19.35■□□□□ 0.69
ITGB1-211ENST00000475184 FERMT2Q96AC1 680 aa19.35■□□□□ 0.69
ITGB1-211ENST00000475184 TRIM43Q96BQ3 446 aaPredicted RBP19.35■□□□□ 0.69
ITGB1-211ENST00000475184 SLC5A4Q9NY91 659 aa19.35■□□□□ 0.69
ITGB1-211ENST00000475184 FAM47AQ5JRC9 791 aa19.34■□□□□ 0.69
ITGB1-211ENST00000475184 TMED8Q6PL24 325 aaPredicted RBP19.34■□□□□ 0.69
ITGB1-211ENST00000475184 CCDC8Q9H0W5 538 aaPredicted RBP19.34■□□□□ 0.69
ITGB1-211ENST00000475184 BAZ2AQ9UIF9 1905 aaKnown RBP19.33■□□□□ 0.69
ITGB1-211ENST00000475184 A0A1W2PRG0 241 aa19.33■□□□□ 0.68
ITGB1-211ENST00000475184 BCAR3O75815 825 aa19.33■□□□□ 0.68
ITGB1-211ENST00000475184 TLE2Q04725 743 aa19.33■□□□□ 0.68
ITGB1-211ENST00000475184 GABPAQ06546 454 aa19.33■□□□□ 0.68
ITGB1-211ENST00000475184 MAP3K12Q12852 859 aa19.33■□□□□ 0.68
ITGB1-211ENST00000475184 PRAMEF19Q5SWL8 479 aa19.33■□□□□ 0.68
ITGB1-211ENST00000475184 ABRAQ8N0Z2 381 aa19.33■□□□□ 0.68
ITGB1-211ENST00000475184 MB21D1Q8N884 522 aa19.33■□□□□ 0.68
ITGB1-211ENST00000475184 RNPC3Q96LT9 517 aaKnown RBP19.33■□□□□ 0.68
ITGB1-211ENST00000475184 MROH8Q9H579 483 aa19.33■□□□□ 0.68
ITGB1-211ENST00000475184 TMEM265A0A087WTH1 108 aa19.32■□□□□ 0.68
ITGB1-211ENST00000475184 MPHOSPH10O00566 681 aaKnown RBP19.32■□□□□ 0.68
ITGB1-211ENST00000475184 POLR3DP05423 398 aaPredicted RBP19.32■□□□□ 0.68
ITGB1-211ENST00000475184 ATP8B2P98198 1209 aa19.32■□□□□ 0.68
ITGB1-211ENST00000475184 PLS1Q14651 629 aa19.32■□□□□ 0.68
ITGB1-211ENST00000475184 TMEM57Q8N5G2 664 aa19.32■□□□□ 0.68
ITGB1-211ENST00000475184 SYMPKQ92797 1274 aaKnown RBP19.32■□□□□ 0.68
ITGB1-211ENST00000475184 EAF2Q96CJ1 260 aaPredicted RBP19.32■□□□□ 0.68
ITGB1-211ENST00000475184 MAML3Q96JK9 1138 aa19.32■□□□□ 0.68
ITGB1-211ENST00000475184 RIOK1Q9BRS2 568 aaKnown RBP19.32■□□□□ 0.68
ITGB1-211ENST00000475184 ANTXR1Q9H6X2 564 aa19.32■□□□□ 0.68
ITGB1-211ENST00000475184 NOP58Q9Y2X3 529 aaKnown RBP19.32■□□□□ 0.68
ITGB1-211ENST00000475184 TACC3Q9Y6A5 838 aa19.32■□□□□ 0.68
ITGB1-211ENST00000475184 BDP1A6H8Y1 2624 aa19.31■□□□□ 0.68
ITGB1-211ENST00000475184 NCAPG2Q86XI2 1143 aa19.31■□□□□ 0.68
ITGB1-211ENST00000475184 PHF24Q9UPV7 400 aa19.31■□□□□ 0.68
ITGB1-211ENST00000475184 CHD9Q3L8U1 2897 aa19.3■□□□□ 0.68
ITGB1-211ENST00000475184 CLTBP09497 229 aa19.3■□□□□ 0.68
ITGB1-211ENST00000475184 ITGB8P26012 769 aa19.3■□□□□ 0.68
ITGB1-211ENST00000475184 DSG3P32926 999 aa19.3■□□□□ 0.68
ITGB1-211ENST00000475184 EPHB4P54760 987 aa19.3■□□□□ 0.68
ITGB1-211ENST00000475184 KIAA1755Q5JYT7 1200 aa19.3■□□□□ 0.68
ITGB1-211ENST00000475184 C1orf115Q9H7X2 142 aa19.3■□□□□ 0.68
ITGB1-211ENST00000475184 XPNPEP3Q9NQH7 507 aa19.3■□□□□ 0.68
ITGB1-211ENST00000475184 MAGEB6P1A0A0J9YX57 407 aa19.29■□□□□ 0.68
ITGB1-211ENST00000475184 FLOT1O75955 427 aa19.29■□□□□ 0.68
ITGB1-211ENST00000475184 RARBP10826 455 aa19.29■□□□□ 0.68
ITGB1-211ENST00000475184 FCER1AP12319 257 aa19.29■□□□□ 0.68
ITGB1-211ENST00000475184 EVX2Q03828 476 aa19.29■□□□□ 0.68
ITGB1-211ENST00000475184 ATG4CQ96DT6 458 aa19.29■□□□□ 0.68
ITGB1-211ENST00000475184 CRNKL1Q9BZJ0 848 aaKnown RBP19.29■□□□□ 0.68
ITGB1-211ENST00000475184 MCM9Q9NXL9 1143 aa19.29■□□□□ 0.68
ITGB1-211ENST00000475184 NRBP1Q9UHY1 535 aa19.29■□□□□ 0.68
ITGB1-211ENST00000475184 KIAA0355O15063 1070 aa19.28■□□□□ 0.68
ITGB1-211ENST00000475184 PQBP1O60828 265 aaKnown RBP19.28■□□□□ 0.68
ITGB1-211ENST00000475184 RAG1P15918 1043 aa19.28■□□□□ 0.68
ITGB1-211ENST00000475184 TMEM179Q6ZVK1 233 aa19.28■□□□□ 0.68
ITGB1-211ENST00000475184 RNF180Q86T96 592 aa19.28■□□□□ 0.68
ITGB1-211ENST00000475184 ROBO3Q96MS0 1386 aa19.28■□□□□ 0.68
ITGB1-211ENST00000475184 MCM3APO60318 1980 aa19.28■□□□□ 0.68
ITGB1-211ENST00000475184 A0A1W2PQ45 241 aaPredicted RBP19.27■□□□□ 0.68
ITGB1-211ENST00000475184 A0A1W2PQY0 241 aa19.27■□□□□ 0.68
ITGB1-211ENST00000475184 PGK1P00558 417 aa19.27■□□□□ 0.68
ITGB1-211ENST00000475184 FPGSQ05932 587 aa19.27■□□□□ 0.68
ITGB1-211ENST00000475184 SPICE1Q8N0Z3 855 aa19.27■□□□□ 0.68
ITGB1-211ENST00000475184 SLC44A5Q8NCS7 719 aa19.27■□□□□ 0.68
ITGB1-211ENST00000475184 SLC25A27O95847 323 aa19.26■□□□□ 0.67
ITGB1-211ENST00000475184 DNAJB2P25686 324 aa19.26■□□□□ 0.67
ITGB1-211ENST00000475184 GRIN2CQ14957 1233 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms