RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 DPP9Q86TI2 863 aa16.98■□□□□ 0.31
CCDC78-209ENST00000474647 ERC1Q8IUD2 1116 aa16.98■□□□□ 0.31
CCDC78-209ENST00000474647 LPAR1Q92633 364 aa16.98■□□□□ 0.31
CCDC78-209ENST00000474647 CRNKL1Q9BZJ0 848 aaKnown RBP16.98■□□□□ 0.31
CCDC78-209ENST00000474647 IL1RAPL2Q9NP60 686 aa16.98■□□□□ 0.31
CCDC78-209ENST00000474647 PRKAG2Q9UGJ0 569 aa16.98■□□□□ 0.31
CCDC78-209ENST00000474647 MYCNP04198 464 aaPredicted RBP16.97■□□□□ 0.31
CCDC78-209ENST00000474647 TTF1Q15361 905 aaPredicted RBP16.97■□□□□ 0.31
CCDC78-209ENST00000474647 DNAJC2Q99543 621 aaKnown RBP16.97■□□□□ 0.31
CCDC78-209ENST00000474647 MCM9Q9NXL9 1143 aa16.97■□□□□ 0.31
CCDC78-209ENST00000474647 MCM3APO60318 1980 aa16.97■□□□□ 0.31
CCDC78-209ENST00000474647 APBB1O00213 710 aa16.96■□□□□ 0.31
CCDC78-209ENST00000474647 DNM1LO00429 736 aa16.96■□□□□ 0.31
CCDC78-209ENST00000474647 HOXC6P09630 235 aa16.96■□□□□ 0.31
CCDC78-209ENST00000474647 PDE6AP16499 860 aa16.96■□□□□ 0.31
CCDC78-209ENST00000474647 ADORA2AP29274 412 aa16.96■□□□□ 0.31
CCDC78-209ENST00000474647 GJC2Q5T442 439 aaPredicted RBP16.96■□□□□ 0.31
CCDC78-209ENST00000474647 SLC9C2Q5TAH2 1124 aa16.96■□□□□ 0.31
CCDC78-209ENST00000474647 ANO1Q5XXA6 986 aa16.96■□□□□ 0.31
CCDC78-209ENST00000474647 TMED8Q6PL24 325 aaPredicted RBP16.96■□□□□ 0.31
CCDC78-209ENST00000474647 SAMD1Q6SPF0 538 aaPredicted RBP16.96■□□□□ 0.31
CCDC78-209ENST00000474647 TRPV1Q8NER1 839 aa16.96■□□□□ 0.31
CCDC78-209ENST00000474647 SDR42E1Q8WUS8 393 aa16.96■□□□□ 0.31
CCDC78-209ENST00000474647 ATP11BQ9Y2G3 1177 aa16.96■□□□□ 0.31
CCDC78-209ENST00000474647 PRUNE2Q8WUY3 3088 aa16.96■□□□□ 0.31
CCDC78-209ENST00000474647 A0A1W2PRG0 241 aa16.95■□□□□ 0.3
CCDC78-209ENST00000474647 CYBAP13498 195 aa16.95■□□□□ 0.3
CCDC78-209ENST00000474647 RTP1P59025 263 aa16.95■□□□□ 0.3
CCDC78-209ENST00000474647 HNRNPUQ00839 825 aaKnown RBP eCLIP16.95■□□□□ 0.3
CCDC78-209ENST00000474647 PLS1Q14651 629 aa16.95■□□□□ 0.3
CCDC78-209ENST00000474647 COG2Q14746 738 aa16.95■□□□□ 0.3
CCDC78-209ENST00000474647 FAM161BQ96MY7 647 aa16.95■□□□□ 0.3
CCDC78-209ENST00000474647 MOV10L1Q9BXT6 1211 aaKnown RBP16.95■□□□□ 0.3
CCDC78-209ENST00000474647 ZNF532Q9HCE3 1301 aa16.95■□□□□ 0.3
CCDC78-209ENST00000474647 KBTBD13C9JR72 458 aa16.94■□□□□ 0.3
CCDC78-209ENST00000474647 GOLIM4O00461 696 aa16.94■□□□□ 0.3
CCDC78-209ENST00000474647 CYP2D6P10635 497 aa16.94■□□□□ 0.3
CCDC78-209ENST00000474647 ERCC3P19447 782 aa16.94■□□□□ 0.3
CCDC78-209ENST00000474647 GABPAQ06546 454 aa16.94■□□□□ 0.3
CCDC78-209ENST00000474647 CLEC10AQ8IUN9 316 aa16.94■□□□□ 0.3
CCDC78-209ENST00000474647 LCORLQ8N3X6 602 aa16.94■□□□□ 0.3
CCDC78-209ENST00000474647 SLC44A5Q8NCS7 719 aa16.94■□□□□ 0.3
CCDC78-209ENST00000474647 SPATC1LQ9H0A9 340 aa16.94■□□□□ 0.3
CCDC78-209ENST00000474647 PRDM5Q9NQX1 630 aaPredicted RBP16.94■□□□□ 0.3
CCDC78-209ENST00000474647 HOXC10Q9NYD6 342 aa16.94■□□□□ 0.3
CCDC78-209ENST00000474647 GREB1LQ9C091 1923 aaPredicted RBP16.94■□□□□ 0.3
CCDC78-209ENST00000474647 CDH23Q9H251 3354 aa16.93■□□□□ 0.3
CCDC78-209ENST00000474647 HSP90AB4PQ58FF6 505 aa16.93■□□□□ 0.3
CCDC78-209ENST00000474647 TMEM179Q6ZVK1 233 aa16.93■□□□□ 0.3
CCDC78-209ENST00000474647 NCAPG2Q86XI2 1143 aa16.93■□□□□ 0.3
CCDC78-209ENST00000474647 SPICE1Q8N0Z3 855 aa16.93■□□□□ 0.3
CCDC78-209ENST00000474647 ARRDC4Q8NCT1 418 aa16.93■□□□□ 0.3
CCDC78-209ENST00000474647 RHPN1Q8TCX5 695 aa16.93■□□□□ 0.3
CCDC78-209ENST00000474647 PANK1Q8TE04 598 aa16.93■□□□□ 0.3
CCDC78-209ENST00000474647 DCP1AQ9NPI6 582 aaPredicted RBP16.93■□□□□ 0.3
CCDC78-209ENST00000474647 STRNO43815 780 aa16.92■□□□□ 0.3
CCDC78-209ENST00000474647 FLOT1O75955 427 aa16.92■□□□□ 0.3
CCDC78-209ENST00000474647 KIAA1755Q5JYT7 1200 aa16.92■□□□□ 0.3
CCDC78-209ENST00000474647 OLFML2BQ68BL8 750 aa16.92■□□□□ 0.3
CCDC78-209ENST00000474647 DYNLL2Q96FJ2 89 aa16.92■□□□□ 0.3
CCDC78-209ENST00000474647 ARMT1Q9H993 441 aa16.92■□□□□ 0.3
CCDC78-209ENST00000474647 ARHGEF10LQ9HCE6 1279 aa16.92■□□□□ 0.3
CCDC78-209ENST00000474647 COBLO75128 1261 aa16.91■□□□□ 0.3
CCDC78-209ENST00000474647 IFIT2P09913 472 aaKnown RBP16.91■□□□□ 0.3
CCDC78-209ENST00000474647 ICA1Q05084 483 aa16.91■□□□□ 0.3
CCDC78-209ENST00000474647 ZNF697Q5TEC3 545 aa16.91■□□□□ 0.3
CCDC78-209ENST00000474647 CLASRPQ8N2M8 674 aaKnown RBP16.91■□□□□ 0.3
CCDC78-209ENST00000474647 SHCBP1Q8NEM2 672 aa16.91■□□□□ 0.3
CCDC78-209ENST00000474647 ATG4CQ96DT6 458 aa16.91■□□□□ 0.3
CCDC78-209ENST00000474647 GUCD1Q96NT3 240 aa16.91■□□□□ 0.3
CCDC78-209ENST00000474647 SLC5A4Q9NY91 659 aa16.91■□□□□ 0.3
CCDC78-209ENST00000474647 SWAP70Q9UH65 585 aa16.91■□□□□ 0.3
CCDC78-209ENST00000474647 TCRBV5S4A2TA0A5A2 114 aa16.9■□□□□ 0.3
CCDC78-209ENST00000474647 SEPT4O43236 478 aa16.9■□□□□ 0.3
CCDC78-209ENST00000474647 MBD4O95243 580 aa16.9■□□□□ 0.3
CCDC78-209ENST00000474647 AKR1B1P15121 316 aa16.9■□□□□ 0.3
CCDC78-209ENST00000474647 TRIM60Q495X7 471 aa16.9■□□□□ 0.3
CCDC78-209ENST00000474647 PRAMEF19Q5SWL8 479 aa16.9■□□□□ 0.3
CCDC78-209ENST00000474647 SLC39A5Q6ZMH5 540 aa16.9■□□□□ 0.3
CCDC78-209ENST00000474647 MB21D1Q8N884 522 aa16.9■□□□□ 0.3
CCDC78-209ENST00000474647 FERMT2Q96AC1 680 aa16.9■□□□□ 0.3
CCDC78-209ENST00000474647 MROH8Q9H579 483 aa16.9■□□□□ 0.3
CCDC78-209ENST00000474647 SH2D4AQ9H788 454 aa16.9■□□□□ 0.3
CCDC78-209ENST00000474647 VCANP13611 3396 aa16.89■□□□□ 0.3
CCDC78-209ENST00000474647 PRKAB2O43741 272 aa16.89■□□□□ 0.29
CCDC78-209ENST00000474647 IGHA2P01877 340 aa16.89■□□□□ 0.29
CCDC78-209ENST00000474647 DSG3P32926 999 aa16.89■□□□□ 0.29
CCDC78-209ENST00000474647 SLFNL1Q499Z3 407 aa16.89■□□□□ 0.29
CCDC78-209ENST00000474647 AMOTL1Q8IY63 956 aa16.89■□□□□ 0.29
CCDC78-209ENST00000474647 KIF1BPQ96EK5 621 aa16.89■□□□□ 0.29
CCDC78-209ENST00000474647 GBF1Q92538 1859 aa16.88■□□□□ 0.29
CCDC78-209ENST00000474647 CYP2D7A0A087X1C5 515 aa16.88■□□□□ 0.29
CCDC78-209ENST00000474647 POTEB2H3BUK9 544 aa16.88■□□□□ 0.29
CCDC78-209ENST00000474647 WDR46O15213 610 aaKnown RBP16.88■□□□□ 0.29
CCDC78-209ENST00000474647 RAD21O60216 631 aa16.88■□□□□ 0.29
CCDC78-209ENST00000474647 FCER1AP12319 257 aa16.88■□□□□ 0.29
CCDC78-209ENST00000474647 ADCYAP1R1P41586 468 aa16.88■□□□□ 0.29
CCDC78-209ENST00000474647 FAM47AQ5JRC9 791 aa16.88■□□□□ 0.29
CCDC78-209ENST00000474647 FAM109BQ6ICB4 259 aaPredicted RBP16.88■□□□□ 0.29
CCDC78-209ENST00000474647 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms