RNA–Protein interactions for RNA: ENST00000474258.1

SEMA4D-216, Transcript of semaphorin 4D, humanhuman

TSL 4

Gene SEMA4D, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-216ENST00000474258 CCL14Q16627 93 aa13.32□□□□□ -0.28
SEMA4D-216ENST00000474258 C12orf60Q5U649 245 aa13.32□□□□□ -0.28
SEMA4D-216ENST00000474258 SLC44A5Q8NCS7 719 aa13.32□□□□□ -0.28
SEMA4D-216ENST00000474258 DIS3LQ8TF46 1054 aaKnown RBP13.32□□□□□ -0.28
SEMA4D-216ENST00000474258 DYNLL2Q96FJ2 89 aa13.32□□□□□ -0.28
SEMA4D-216ENST00000474258 CCDC17Q96LX7 622 aa13.32□□□□□ -0.28
SEMA4D-216ENST00000474258 NBPF3Q9H094 633 aa13.32□□□□□ -0.28
SEMA4D-216ENST00000474258 HOXC10Q9NYD6 342 aa13.32□□□□□ -0.28
SEMA4D-216ENST00000474258 BTBD7Q9P203 1132 aa13.32□□□□□ -0.28
SEMA4D-216ENST00000474258 RBM27Q9P2N5 1060 aaKnown RBP13.32□□□□□ -0.28
SEMA4D-216ENST00000474258 OGDHLQ9ULD0 1010 aa13.32□□□□□ -0.28
SEMA4D-216ENST00000474258 IVNS1ABPQ9Y6Y0 642 aa13.32□□□□□ -0.28
SEMA4D-216ENST00000474258 USP17L12C9JPN9 530 aa13.31□□□□□ -0.28
SEMA4D-216ENST00000474258 USP17L21D6R901 530 aa13.31□□□□□ -0.28
SEMA4D-216ENST00000474258 PTPREP23469 700 aa13.31□□□□□ -0.28
SEMA4D-216ENST00000474258 CDK8P49336 464 aa13.31□□□□□ -0.28
SEMA4D-216ENST00000474258 ARHGEF10LQ9HCE6 1279 aa13.31□□□□□ -0.28
SEMA4D-216ENST00000474258 ECHDC1Q9NTX5 307 aa13.31□□□□□ -0.28
SEMA4D-216ENST00000474258 SLC4A4Q9Y6R1 1079 aa13.31□□□□□ -0.28
SEMA4D-216ENST00000474258 MYH4Q9Y623 1939 aa13.31□□□□□ -0.28
SEMA4D-216ENST00000474258 CHGBP05060 677 aa13.3□□□□□ -0.28
SEMA4D-216ENST00000474258 AKR1B1P15121 316 aa13.3□□□□□ -0.28
SEMA4D-216ENST00000474258 MNX1P50219 401 aaPredicted RBP13.3□□□□□ -0.28
SEMA4D-216ENST00000474258 MFSD14CQ5VZR4 134 aa13.3□□□□□ -0.28
SEMA4D-216ENST00000474258 C16orf86Q6ZW13 317 aa13.3□□□□□ -0.28
SEMA4D-216ENST00000474258 LPAR1Q92633 364 aa13.3□□□□□ -0.28
SEMA4D-216ENST00000474258 TANGO6Q9C0B7 1094 aa13.3□□□□□ -0.28
SEMA4D-216ENST00000474258 PUS7LQ9H0K6 701 aaKnown RBP13.3□□□□□ -0.28
SEMA4D-216ENST00000474258 PRO3102Q9H379 93 aa13.3□□□□□ -0.28
SEMA4D-216ENST00000474258 C11orf49Q9H6J7 331 aa13.3□□□□□ -0.28
SEMA4D-216ENST00000474258 DCTPP1Q9H773 170 aa13.3□□□□□ -0.28
SEMA4D-216ENST00000474258 SH2D4AQ9H788 454 aa13.3□□□□□ -0.28
SEMA4D-216ENST00000474258 SMCHD1A6NHR9 2005 aa13.3□□□□□ -0.28
SEMA4D-216ENST00000474258 A0A0G2JMZ2 1700 aa13.3□□□□□ -0.28
SEMA4D-216ENST00000474258 CYP2D7A0A087X1C5 515 aa13.29□□□□□ -0.28
SEMA4D-216ENST00000474258 STRNO43815 780 aa13.29□□□□□ -0.28
SEMA4D-216ENST00000474258 HOXC6P09630 235 aa13.29□□□□□ -0.28
SEMA4D-216ENST00000474258 CCND3P30281 292 aaPredicted RBP13.29□□□□□ -0.28
SEMA4D-216ENST00000474258 IRX6P78412 446 aaPredicted RBP13.29□□□□□ -0.28
SEMA4D-216ENST00000474258 ATP2B2Q01814 1243 aa13.29□□□□□ -0.28
SEMA4D-216ENST00000474258 ICA1Q05084 483 aa13.29□□□□□ -0.28
SEMA4D-216ENST00000474258 GRB14Q14449 540 aa13.29□□□□□ -0.28
SEMA4D-216ENST00000474258 CTR9Q6PD62 1173 aa13.29□□□□□ -0.28
SEMA4D-216ENST00000474258 SIAH1Q8IUQ4 282 aa13.29□□□□□ -0.28
SEMA4D-216ENST00000474258 MB21D1Q8N884 522 aa13.29□□□□□ -0.28
SEMA4D-216ENST00000474258 GPATCH3Q96I76 525 aa13.29□□□□□ -0.28
SEMA4D-216ENST00000474258 VCPKMTQ9H867 229 aa13.29□□□□□ -0.28
SEMA4D-216ENST00000474258 TMX2Q9Y320 296 aa13.29□□□□□ -0.28
SEMA4D-216ENST00000474258 ZNF236Q9UL36 1845 aa13.29□□□□□ -0.28
SEMA4D-216ENST00000474258 PLXNA1Q9UIW2 1896 aa13.29□□□□□ -0.28
SEMA4D-216ENST00000474258 SMIM22K7EJ46 135 aa13.28□□□□□ -0.28
SEMA4D-216ENST00000474258 DSG3P32926 999 aa13.28□□□□□ -0.28
SEMA4D-216ENST00000474258 KIAA1755Q5JYT7 1200 aa13.28□□□□□ -0.28
SEMA4D-216ENST00000474258 LHX8Q68G74 356 aa13.28□□□□□ -0.28
SEMA4D-216ENST00000474258 NPLOC4Q8TAT6 608 aa13.28□□□□□ -0.28
SEMA4D-216ENST00000474258 STRBPQ96SI9 672 aaKnown RBP13.28□□□□□ -0.28
SEMA4D-216ENST00000474258 MOV10L1Q9BXT6 1211 aaKnown RBP13.28□□□□□ -0.28
SEMA4D-216ENST00000474258 SPATC1LQ9H0A9 340 aa13.28□□□□□ -0.28
SEMA4D-216ENST00000474258 KANSL2Q9H9L4 492 aa13.28□□□□□ -0.28
SEMA4D-216ENST00000474258 FLRT1Q9NZU1 646 aa13.28□□□□□ -0.28
SEMA4D-216ENST00000474258 ARPP21Q9UBL0 812 aaPredicted RBP13.28□□□□□ -0.28
SEMA4D-216ENST00000474258 GREB1LQ9C091 1923 aaPredicted RBP13.28□□□□□ -0.28
SEMA4D-216ENST00000474258 A0A1W2PPC1 479 aa13.27□□□□□ -0.29
SEMA4D-216ENST00000474258 WDR46O15213 610 aaKnown RBP13.27□□□□□ -0.29
SEMA4D-216ENST00000474258 FLOT1O75955 427 aa13.27□□□□□ -0.29
SEMA4D-216ENST00000474258 EEF2P13639 858 aaKnown RBP13.27□□□□□ -0.29
SEMA4D-216ENST00000474258 GIMAP6Q6P9H5 292 aa13.27□□□□□ -0.29
SEMA4D-216ENST00000474258 DPP9Q86TI2 863 aa13.27□□□□□ -0.29
SEMA4D-216ENST00000474258 CLEC10AQ8IUN9 316 aa13.27□□□□□ -0.29
SEMA4D-216ENST00000474258 C7orf61Q8IZ16 206 aa13.27□□□□□ -0.29
SEMA4D-216ENST00000474258 SPICE1Q8N0Z3 855 aa13.27□□□□□ -0.29
SEMA4D-216ENST00000474258 KBTBD3Q8NAB2 608 aa13.27□□□□□ -0.29
SEMA4D-216ENST00000474258 SHCBP1Q8NEM2 672 aa13.27□□□□□ -0.29
SEMA4D-216ENST00000474258 STAP2Q9UGK3 403 aa13.27□□□□□ -0.29
SEMA4D-216ENST00000474258 PFASO15067 1338 aa13.26□□□□□ -0.29
SEMA4D-216ENST00000474258 MSCO60682 206 aa13.26□□□□□ -0.29
SEMA4D-216ENST00000474258 ZFYP08048 801 aaPredicted RBP13.26□□□□□ -0.29
SEMA4D-216ENST00000474258 ERCC3P19447 782 aa13.26□□□□□ -0.29
SEMA4D-216ENST00000474258 CNGA1P29973 690 aa13.26□□□□□ -0.29
SEMA4D-216ENST00000474258 PLS1Q14651 629 aa13.26□□□□□ -0.29
SEMA4D-216ENST00000474258 SBK1Q52WX2 424 aa13.26□□□□□ -0.29
SEMA4D-216ENST00000474258 APPBP2Q92624 585 aa13.26□□□□□ -0.29
SEMA4D-216ENST00000474258 MROH8Q9H579 483 aa13.26□□□□□ -0.29
SEMA4D-216ENST00000474258 GOPCQ9HD26 462 aa13.26□□□□□ -0.29
SEMA4D-216ENST00000474258 PPP4R2Q9NY27 417 aa13.26□□□□□ -0.29
SEMA4D-216ENST00000474258 SLC5A4Q9NY91 659 aa13.26□□□□□ -0.29
SEMA4D-216ENST00000474258 GSG1L2A8MUP6 293 aa13.25□□□□□ -0.29
SEMA4D-216ENST00000474258 RNF113AO15541 343 aaKnown RBP13.25□□□□□ -0.29
SEMA4D-216ENST00000474258 COL6A1P12109 1028 aa13.25□□□□□ -0.29
SEMA4D-216ENST00000474258 ADORA2AP29274 412 aa13.25□□□□□ -0.29
SEMA4D-216ENST00000474258 LRRFIP1Q32MZ4 808 aaKnown RBP13.25□□□□□ -0.29
SEMA4D-216ENST00000474258 NCAPG2Q86XI2 1143 aa13.25□□□□□ -0.29
SEMA4D-216ENST00000474258 ABRAQ8N0Z2 381 aa13.25□□□□□ -0.29
SEMA4D-216ENST00000474258 OSBP2Q969R2 916 aa13.25□□□□□ -0.29
SEMA4D-216ENST00000474258 ATG4CQ96DT6 458 aa13.25□□□□□ -0.29
SEMA4D-216ENST00000474258 DDX20Q9UHI6 824 aaKnown RBP13.25□□□□□ -0.29
SEMA4D-216ENST00000474258 TTC41PQ6P2S7 1318 aa13.24□□□□□ -0.29
SEMA4D-216ENST00000474258 MINDY4BA8MYZ0 360 aa13.24□□□□□ -0.29
SEMA4D-216ENST00000474258 ERC2O15083 957 aa13.24□□□□□ -0.29
SEMA4D-216ENST00000474258 SLC25A27O95847 323 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms