RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 NAPBQ9H115 298 aa22.2■■□□□ 1.14
CCDC171-206ENST00000474193 TMX2Q9Y320 296 aa22.2■■□□□ 1.14
CCDC171-206ENST00000474193 TRIM6-TRIM34B2RNG4 842 aa22.19■■□□□ 1.14
CCDC171-206ENST00000474193 ELNP15502 786 aa22.19■■□□□ 1.14
CCDC171-206ENST00000474193 PDE4BQ07343 736 aa22.19■■□□□ 1.14
CCDC171-206ENST00000474193 MTFR1Q15390 333 aa22.19■■□□□ 1.14
CCDC171-206ENST00000474193 STK11IPQ8N1F8 1099 aa22.19■■□□□ 1.14
CCDC171-206ENST00000474193 GOPCQ9HD26 462 aa22.19■■□□□ 1.14
CCDC171-206ENST00000474193 TXNRD2Q9NNW7 524 aa22.19■■□□□ 1.14
CCDC171-206ENST00000474193 SALL3Q9BXA9 1300 aa22.19■■□□□ 1.14
CCDC171-206ENST00000474193 A0A1W2PRG0 241 aa22.18■■□□□ 1.14
CCDC171-206ENST00000474193 RAD21O60216 631 aa22.18■■□□□ 1.14
CCDC171-206ENST00000474193 GJB1P08034 283 aa22.18■■□□□ 1.14
CCDC171-206ENST00000474193 WDR78Q5VTH9 848 aa22.18■■□□□ 1.14
CCDC171-206ENST00000474193 LBX2Q6XYB7 198 aa22.18■■□□□ 1.14
CCDC171-206ENST00000474193 PLEKHH3Q7Z736 793 aa22.18■■□□□ 1.14
CCDC171-206ENST00000474193 TRMT44Q8IYL2 757 aaKnown RBP22.18■■□□□ 1.14
CCDC171-206ENST00000474193 SEC62Q99442 399 aaKnown RBP22.18■■□□□ 1.14
CCDC171-206ENST00000474193 VCPKMTQ9H867 229 aa22.18■■□□□ 1.14
CCDC171-206ENST00000474193 IVNS1ABPQ9Y6Y0 642 aa22.18■■□□□ 1.14
CCDC171-206ENST00000474193 INHAP05111 366 aa22.17■■□□□ 1.14
CCDC171-206ENST00000474193 EEF2P13639 858 aaKnown RBP22.17■■□□□ 1.14
CCDC171-206ENST00000474193 Q3C1V9 767 aa22.17■■□□□ 1.14
CCDC171-206ENST00000474193 OSBPL3Q9H4L5 887 aa22.17■■□□□ 1.14
CCDC171-206ENST00000474193 HELLSQ9NRZ9 838 aa22.17■■□□□ 1.14
CCDC171-206ENST00000474193 GJD2Q9UKL4 321 aa22.17■■□□□ 1.14
CCDC171-206ENST00000474193 RBBP6Q7Z6E9 1792 aaKnown RBP22.17■■□□□ 1.14
CCDC171-206ENST00000474193 DOCK3Q8IZD9 2030 aa22.16■■□□□ 1.14
CCDC171-206ENST00000474193 WDR46O15213 610 aaKnown RBP22.16■■□□□ 1.14
CCDC171-206ENST00000474193 HMGCRP04035 888 aa22.16■■□□□ 1.14
CCDC171-206ENST00000474193 CYP2B6P20813 491 aa22.16■■□□□ 1.14
CCDC171-206ENST00000474193 PDE4AP27815 886 aa22.16■■□□□ 1.14
CCDC171-206ENST00000474193 MB21D1Q8N884 522 aa22.16■■□□□ 1.14
CCDC171-206ENST00000474193 RILPL2Q969X0 211 aa22.16■■□□□ 1.14
CCDC171-206ENST00000474193 PDE4DIPQ5VU43 2346 aa22.15■■□□□ 1.14
CCDC171-206ENST00000474193 SMIM22K7EJ46 135 aa22.15■■□□□ 1.14
CCDC171-206ENST00000474193 FLOT1O75955 427 aa22.15■■□□□ 1.14
CCDC171-206ENST00000474193 RGS2P41220 211 aa22.15■■□□□ 1.14
CCDC171-206ENST00000474193 GPR142Q7Z601 462 aa22.15■■□□□ 1.14
CCDC171-206ENST00000474193 SPICE1Q8N0Z3 855 aa22.15■■□□□ 1.14
CCDC171-206ENST00000474193 SPDYE16A6NNV3 312 aaPredicted RBP22.14■■□□□ 1.13
CCDC171-206ENST00000474193 XRCC5P13010 732 aaKnown RBP22.14■■□□□ 1.13
CCDC171-206ENST00000474193 RASA1P20936 1047 aa22.14■■□□□ 1.13
CCDC171-206ENST00000474193 GJA8P48165 433 aa22.14■■□□□ 1.13
CCDC171-206ENST00000474193 UNC93B1Q9H1C4 597 aa22.14■■□□□ 1.13
CCDC171-206ENST00000474193 PORCNQ9H237 461 aa22.14■■□□□ 1.13
CCDC171-206ENST00000474193 EPB41L4AQ9HCS5 686 aaPredicted RBP22.14■■□□□ 1.13
CCDC171-206ENST00000474193 GTF3C3Q9Y5Q9 886 aa22.14■■□□□ 1.13
CCDC171-206ENST00000474193 ROBO3Q96MS0 1386 aa22.13■■□□□ 1.13
CCDC171-206ENST00000474193 PEX10O60683 326 aa22.13■■□□□ 1.13
CCDC171-206ENST00000474193 TFRCP02786 760 aaKnown RBP22.13■■□□□ 1.13
CCDC171-206ENST00000474193 MFAP1P55081 439 aaKnown RBP22.13■■□□□ 1.13
CCDC171-206ENST00000474193 MCMDC2Q4G0Z9 681 aa22.13■■□□□ 1.13
CCDC171-206ENST00000474193 PPP4R3BQ5MIZ7 849 aa22.13■■□□□ 1.13
CCDC171-206ENST00000474193 SAMD1Q6SPF0 538 aaPredicted RBP22.13■■□□□ 1.13
CCDC171-206ENST00000474193 CLEC10AQ8IUN9 316 aa22.13■■□□□ 1.13
CCDC171-206ENST00000474193 SIAH1Q8IUQ4 282 aa22.13■■□□□ 1.13
CCDC171-206ENST00000474193 HMX1Q9NP08 348 aaPredicted RBP22.13■■□□□ 1.13
CCDC171-206ENST00000474193 NYAP2Q9P242 653 aa22.13■■□□□ 1.13
CCDC171-206ENST00000474193 SGPL1O95470 568 aa22.12■■□□□ 1.13
CCDC171-206ENST00000474193 TSPY3P0CV98 308 aa22.12■■□□□ 1.13
CCDC171-206ENST00000474193 TSPY8P0CW00 308 aa22.12■■□□□ 1.13
CCDC171-206ENST00000474193 DSG3P32926 999 aa22.12■■□□□ 1.13
CCDC171-206ENST00000474193 PPARAQ07869 468 aa22.12■■□□□ 1.13
CCDC171-206ENST00000474193 PLS1Q14651 629 aa22.12■■□□□ 1.13
CCDC171-206ENST00000474193 PRPF38BQ5VTL8 546 aaKnown RBP22.12■■□□□ 1.13
CCDC171-206ENST00000474193 U2AF1L4Q8WU68 220 aaKnown RBP22.12■■□□□ 1.13
CCDC171-206ENST00000474193 RPTORQ8N122 1335 aa22.11■■□□□ 1.13
CCDC171-206ENST00000474193 SLC15A5A6NIM6 579 aa22.11■■□□□ 1.13
CCDC171-206ENST00000474193 STRNO43815 780 aa22.11■■□□□ 1.13
CCDC171-206ENST00000474193 PRDM1O75626 825 aa22.11■■□□□ 1.13
CCDC171-206ENST00000474193 ZKSCAN1P17029 563 aaPredicted RBP22.11■■□□□ 1.13
CCDC171-206ENST00000474193 DEFB118Q96PH6 123 aa22.11■■□□□ 1.13
CCDC171-206ENST00000474193 BTBD7Q9P203 1132 aa22.11■■□□□ 1.13
CCDC171-206ENST00000474193 CLIP2Q9UDT6 1046 aa22.11■■□□□ 1.13
CCDC171-206ENST00000474193 HTTP42858 3142 aa22.11■■□□□ 1.13
CCDC171-206ENST00000474193 CNMDO75829 334 aa22.1■■□□□ 1.13
CCDC171-206ENST00000474193 MAP2K5Q13163 448 aa22.1■■□□□ 1.13
CCDC171-206ENST00000474193 TTC22Q5TAA0 569 aa22.1■■□□□ 1.13
CCDC171-206ENST00000474193 CCDC129Q6ZRS4 1044 aa22.1■■□□□ 1.13
CCDC171-206ENST00000474193 SPATC1LQ9H0A9 340 aa22.1■■□□□ 1.13
CCDC171-206ENST00000474193 SLC5A4Q9NY91 659 aa22.1■■□□□ 1.13
CCDC171-206ENST00000474193 CTDP1Q9Y5B0 961 aaPredicted RBP22.1■■□□□ 1.13
CCDC171-206ENST00000474193 HIP1O00291 1037 aa22.09■■□□□ 1.13
CCDC171-206ENST00000474193 TTLL1O95922 423 aa22.09■■□□□ 1.13
CCDC171-206ENST00000474193 PTPREP23469 700 aa22.09■■□□□ 1.13
CCDC171-206ENST00000474193 KIAA1755Q5JYT7 1200 aa22.09■■□□□ 1.13
CCDC171-206ENST00000474193 MORN1Q5T089 497 aa22.09■■□□□ 1.13
CCDC171-206ENST00000474193 SHCBP1Q8NEM2 672 aa22.09■■□□□ 1.13
CCDC171-206ENST00000474193 APBA2Q99767 749 aa22.09■■□□□ 1.13
CCDC171-206ENST00000474193 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.09■■□□□ 1.13
CCDC171-206ENST00000474193 MROH8Q9H579 483 aa22.09■■□□□ 1.13
CCDC171-206ENST00000474193 F5H6K3 240 aa22.08■■□□□ 1.13
CCDC171-206ENST00000474193 TFAP4Q01664 338 aa22.08■■□□□ 1.13
CCDC171-206ENST00000474193 KLRC3Q07444 240 aa22.08■■□□□ 1.13
CCDC171-206ENST00000474193 MFSD14CQ5VZR4 134 aa22.08■■□□□ 1.13
CCDC171-206ENST00000474193 DPP9Q86TI2 863 aa22.08■■□□□ 1.13
CCDC171-206ENST00000474193 NEDD1Q8NHV4 660 aa22.08■■□□□ 1.13
CCDC171-206ENST00000474193 HTATIP2Q9BUP3 242 aa22.08■■□□□ 1.13
CCDC171-206ENST00000474193 SYNPO2Q9UMS6 1093 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms