RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 SMC1AQ14683 1233 aaKnown RBP23.97■■□□□ 1.43
COL18A1-207ENST00000473212 IFIT1BQ5T764 474 aaKnown RBP23.97■■□□□ 1.43
COL18A1-207ENST00000473212 CALCOCO1Q9P1Z2 691 aa23.97■■□□□ 1.43
COL18A1-207ENST00000473212 JAG2Q9Y219 1238 aa23.97■■□□□ 1.43
COL18A1-207ENST00000473212 KRT2P35908 639 aa23.97■■□□□ 1.43
COL18A1-207ENST00000473212 FAM47AQ5JRC9 791 aa23.97■■□□□ 1.43
COL18A1-207ENST00000473212 PLCH1Q4KWH8 1693 aa23.96■■□□□ 1.43
COL18A1-207ENST00000473212 DOT1LQ8TEK3 1739 aa23.96■■□□□ 1.43
COL18A1-207ENST00000473212 TFRCP02786 760 aaKnown RBP23.96■■□□□ 1.43
COL18A1-207ENST00000473212 TROAPQ12815 778 aa23.96■■□□□ 1.43
COL18A1-207ENST00000473212 CUL4BQ13620 913 aa23.96■■□□□ 1.43
COL18A1-207ENST00000473212 TXLNAP40222 546 aa23.95■■□□□ 1.43
COL18A1-207ENST00000473212 ADD3Q9UEY8 706 aaKnown RBP23.95■■□□□ 1.43
COL18A1-207ENST00000473212 LOC102724428A0A0B4J2F2 783 aa23.95■■□□□ 1.42
COL18A1-207ENST00000473212 CDC25AP30304 524 aa23.95■■□□□ 1.42
COL18A1-207ENST00000473212 SIK1P57059 783 aa23.95■■□□□ 1.42
COL18A1-207ENST00000473212 ST5P78524 1137 aa23.95■■□□□ 1.42
COL18A1-207ENST00000473212 AK7Q96M32 723 aa23.95■■□□□ 1.42
COL18A1-207ENST00000473212 USP17L12C9JPN9 530 aa23.94■■□□□ 1.42
COL18A1-207ENST00000473212 USP17L21D6R901 530 aa23.94■■□□□ 1.42
COL18A1-207ENST00000473212 ABL1P00519 1130 aa23.94■■□□□ 1.42
COL18A1-207ENST00000473212 PBX1P40424 430 aa23.94■■□□□ 1.42
COL18A1-207ENST00000473212 ERFEQ4G0M1 354 aa23.94■■□□□ 1.42
COL18A1-207ENST00000473212 FUT8Q9BYC5 575 aa23.94■■□□□ 1.42
COL18A1-207ENST00000473212 CYP2D6P10635 497 aa23.94■■□□□ 1.42
COL18A1-207ENST00000473212 SH3RF1Q7Z6J0 888 aa23.94■■□□□ 1.42
COL18A1-207ENST00000473212 SRBD1Q8N5C6 995 aaKnown RBP23.94■■□□□ 1.42
COL18A1-207ENST00000473212 NEK11Q8NG66 645 aa23.94■■□□□ 1.42
COL18A1-207ENST00000473212 NAA15Q9BXJ9 866 aaKnown RBP23.94■■□□□ 1.42
COL18A1-207ENST00000473212 PUF60Q9UHX1 559 aaKnown RBP23.94■■□□□ 1.42
COL18A1-207ENST00000473212 CACNA1SQ13698 1873 aa23.94■■□□□ 1.42
COL18A1-207ENST00000473212 CASP14P31944 242 aa23.93■■□□□ 1.42
COL18A1-207ENST00000473212 HNRNPH2P55795 449 aaKnown RBP23.93■■□□□ 1.42
COL18A1-207ENST00000473212 CHMP4BP1P59074 171 aa23.93■■□□□ 1.42
COL18A1-207ENST00000473212 PTGDRQ13258 359 aa23.93■■□□□ 1.42
COL18A1-207ENST00000473212 CDKAL1Q5VV42 579 aa23.93■■□□□ 1.42
COL18A1-207ENST00000473212 CTR9Q6PD62 1173 aa23.93■■□□□ 1.42
COL18A1-207ENST00000473212 BICDL1Q6ZP65 573 aa23.93■■□□□ 1.42
COL18A1-207ENST00000473212 MYH13Q9UKX3 1938 aa23.93■■□□□ 1.42
COL18A1-207ENST00000473212 PHLPP1O60346 1717 aa23.93■■□□□ 1.42
COL18A1-207ENST00000473212 ZNF804BA4D1E1 1349 aa23.93■■□□□ 1.42
COL18A1-207ENST00000473212 PPP1R3GB7ZBB8 358 aa23.93■■□□□ 1.42
COL18A1-207ENST00000473212 CCT6AP40227 531 aaKnown RBP23.93■■□□□ 1.42
COL18A1-207ENST00000473212 RCAN1P53805 252 aa23.93■■□□□ 1.42
COL18A1-207ENST00000473212 SLC51AQ86UW1 340 aa23.93■■□□□ 1.42
COL18A1-207ENST00000473212 CCDC24Q8N4L8 307 aa23.93■■□□□ 1.42
COL18A1-207ENST00000473212 TNFRSF25Q93038 417 aa23.93■■□□□ 1.42
COL18A1-207ENST00000473212 MTA3Q9BTC8 594 aa23.93■■□□□ 1.42
COL18A1-207ENST00000473212 ANAPC4Q9UJX5 808 aa23.93■■□□□ 1.42
COL18A1-207ENST00000473212 XDHP47989 1333 aa23.93■■□□□ 1.42
COL18A1-207ENST00000473212 KIF5CO60282 957 aa23.92■■□□□ 1.42
COL18A1-207ENST00000473212 MFAP3LO75121 409 aa23.92■■□□□ 1.42
COL18A1-207ENST00000473212 IL17AQ16552 155 aa23.92■■□□□ 1.42
COL18A1-207ENST00000473212 SRGAP1Q7Z6B7 1085 aa23.92■■□□□ 1.42
COL18A1-207ENST00000473212 CATIPQ7Z7H3 387 aa23.92■■□□□ 1.42
COL18A1-207ENST00000473212 MTRQ99707 1265 aa23.92■■□□□ 1.42
COL18A1-207ENST00000473212 CTNND2Q9UQB3 1225 aa23.92■■□□□ 1.42
COL18A1-207ENST00000473212 RTL9Q8NET4 1388 aa23.92■■□□□ 1.42
COL18A1-207ENST00000473212 DUOX1Q9NRD9 1551 aa23.92■■□□□ 1.42
COL18A1-207ENST00000473212 RNF225M0QZC1 329 aaPredicted RBP23.92■■□□□ 1.42
COL18A1-207ENST00000473212 ZBTB22O15209 634 aa23.92■■□□□ 1.42
COL18A1-207ENST00000473212 PRPF3O43395 683 aaKnown RBP23.92■■□□□ 1.42
COL18A1-207ENST00000473212 XBP1P17861 261 aa23.92■■□□□ 1.42
COL18A1-207ENST00000473212 LONRF2Q1L5Z9 754 aa23.92■■□□□ 1.42
COL18A1-207ENST00000473212 CT47A1Q5JQC4 288 aaPredicted RBP23.92■■□□□ 1.42
COL18A1-207ENST00000473212 CELF1Q92879 486 aaKnown RBP23.92■■□□□ 1.42
COL18A1-207ENST00000473212 MAPK8IP1Q9UQF2 711 aa23.92■■□□□ 1.42
COL18A1-207ENST00000473212 ZNF569Q5MCW4 686 aa23.91■■□□□ 1.42
COL18A1-207ENST00000473212 TTC38Q5R3I4 469 aa23.91■■□□□ 1.42
COL18A1-207ENST00000473212 PIK3AP1Q6ZUJ8 805 aa23.91■■□□□ 1.42
COL18A1-207ENST00000473212 FILIP1LQ4L180 1135 aa23.91■■□□□ 1.42
COL18A1-207ENST00000473212 FAM84BQ96KN1 310 aaPredicted RBP23.91■■□□□ 1.42
COL18A1-207ENST00000473212 GSDMAQ96QA5 445 aa23.91■■□□□ 1.42
COL18A1-207ENST00000473212 CTAGE1Q96RT6 745 aa23.91■■□□□ 1.42
COL18A1-207ENST00000473212 CNTNAP5Q8WYK1 1306 aa23.91■■□□□ 1.42
COL18A1-207ENST00000473212 KCNQ2O43526 872 aa23.9■■□□□ 1.42
COL18A1-207ENST00000473212 GYPCP04921 128 aa23.9■■□□□ 1.42
COL18A1-207ENST00000473212 FXR1P51114 621 aaKnown RBP eCLIP23.9■■□□□ 1.42
COL18A1-207ENST00000473212 JAKMIP3Q5VZ66 844 aa23.9■■□□□ 1.42
COL18A1-207ENST00000473212 RASGRP2Q7LDG7 609 aa23.9■■□□□ 1.42
COL18A1-207ENST00000473212 CDC23Q9UJX2 597 aa23.9■■□□□ 1.42
COL18A1-207ENST00000473212 CCDC151A5D8V7 595 aa23.9■■□□□ 1.42
COL18A1-207ENST00000473212 MCM7P33993 719 aa23.9■■□□□ 1.42
COL18A1-207ENST00000473212 PARP10Q53GL7 1025 aa23.9■■□□□ 1.42
COL18A1-207ENST00000473212 TMTC3Q6ZXV5 915 aa23.9■■□□□ 1.42
COL18A1-207ENST00000473212 ANKZF1Q9H8Y5 726 aa23.89■■□□□ 1.42
COL18A1-207ENST00000473212 TFCP2L1Q9NZI6 479 aa23.89■■□□□ 1.42
COL18A1-207ENST00000473212 GYS2P54840 703 aa23.89■■□□□ 1.41
COL18A1-207ENST00000473212 MARCH10Q8NA82 808 aaPredicted RBP23.89■■□□□ 1.41
COL18A1-207ENST00000473212 ACRBPQ8NEB7 543 aa23.89■■□□□ 1.41
COL18A1-207ENST00000473212 FERMT2Q96AC1 680 aa23.89■■□□□ 1.41
COL18A1-207ENST00000473212 ADAMTS2O95450 1211 aa23.88■■□□□ 1.41
COL18A1-207ENST00000473212 BRD3Q15059 726 aa23.88■■□□□ 1.41
COL18A1-207ENST00000473212 KIF4BQ2VIQ3 1234 aa23.88■■□□□ 1.41
COL18A1-207ENST00000473212 IQCA1Q86XH1 822 aa23.88■■□□□ 1.41
COL18A1-207ENST00000473212 ANKRD18AQ8IVF6 992 aa23.88■■□□□ 1.41
COL18A1-207ENST00000473212 RASGRP4Q8TDF6 673 aa23.88■■□□□ 1.41
COL18A1-207ENST00000473212 MINPP1Q9UNW1 487 aa23.88■■□□□ 1.41
COL18A1-207ENST00000473212 MYH8P13535 1937 aa23.88■■□□□ 1.41
COL18A1-207ENST00000473212 CNGA4Q8IV77 575 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms