RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 DBNLQ9UJU6 430 aaKnown RBP11.43□□□□□ -0.58
VCL-204ENST00000472585 RABGAP1Q9Y3P9 1069 aa11.43□□□□□ -0.58
VCL-204ENST00000472585 PLCD1P51178 756 aa11.42□□□□□ -0.58
VCL-204ENST00000472585 CCNA1P78396 465 aa11.42□□□□□ -0.58
VCL-204ENST00000472585 KIAA1755Q5JYT7 1200 aa11.42□□□□□ -0.58
VCL-204ENST00000472585 TTC39AQ5SRH9 613 aa11.42□□□□□ -0.58
VCL-204ENST00000472585 SLC39A5Q6ZMH5 540 aa11.42□□□□□ -0.58
VCL-204ENST00000472585 TMEM57Q8N5G2 664 aa11.42□□□□□ -0.58
VCL-204ENST00000472585 IL27Q8NEV9 243 aa11.42□□□□□ -0.58
VCL-204ENST00000472585 SSH3Q8TE77 659 aa11.42□□□□□ -0.58
VCL-204ENST00000472585 EAF2Q96CJ1 260 aaPredicted RBP11.42□□□□□ -0.58
VCL-204ENST00000472585 ZNF512BQ96KM6 892 aaPredicted RBP11.42□□□□□ -0.58
VCL-204ENST00000472585 RNPC3Q96LT9 517 aaKnown RBP11.42□□□□□ -0.58
VCL-204ENST00000472585 ANTXR1Q9H6X2 564 aa11.42□□□□□ -0.58
VCL-204ENST00000472585 GINM1Q9NU53 330 aa11.42□□□□□ -0.58
VCL-204ENST00000472585 IVNS1ABPQ9Y6Y0 642 aa11.42□□□□□ -0.58
VCL-204ENST00000472585 A0A1W2PRG0 241 aa11.41□□□□□ -0.58
VCL-204ENST00000472585 SPDYE16A6NNV3 312 aaPredicted RBP11.41□□□□□ -0.58
VCL-204ENST00000472585 USP17L15C9J2P7 530 aa11.41□□□□□ -0.58
VCL-204ENST00000472585 USP17L13C9JLJ4 530 aa11.41□□□□□ -0.58
VCL-204ENST00000472585 USP17L11C9JVI0 530 aa11.41□□□□□ -0.58
VCL-204ENST00000472585 USP17L18D6R9N7 530 aa11.41□□□□□ -0.58
VCL-204ENST00000472585 USP17L22D6RA61 530 aa11.41□□□□□ -0.58
VCL-204ENST00000472585 USP17L17D6RBQ6 530 aa11.41□□□□□ -0.58
VCL-204ENST00000472585 USP17L19D6RCP7 530 aa11.41□□□□□ -0.58
VCL-204ENST00000472585 USP17L20D6RJB6 530 aa11.41□□□□□ -0.58
VCL-204ENST00000472585 HOXC6P09630 235 aa11.41□□□□□ -0.58
VCL-204ENST00000472585 PLCG2P16885 1265 aa11.41□□□□□ -0.58
VCL-204ENST00000472585 VCAM1P19320 739 aa11.41□□□□□ -0.58
VCL-204ENST00000472585 CYP7A1P22680 504 aa11.41□□□□□ -0.58
VCL-204ENST00000472585 SHMT1P34896 483 aa11.41□□□□□ -0.58
VCL-204ENST00000472585 ATP8B2P98198 1209 aa11.41□□□□□ -0.58
VCL-204ENST00000472585 USP17L24Q0WX57 530 aa11.41□□□□□ -0.58
VCL-204ENST00000472585 GJC2Q5T442 439 aaPredicted RBP11.41□□□□□ -0.58
VCL-204ENST00000472585 ATF7IPQ6VMQ6 1270 aa11.41□□□□□ -0.58
VCL-204ENST00000472585 LBX2Q6XYB7 198 aa11.41□□□□□ -0.58
VCL-204ENST00000472585 PPM1EQ8WY54 764 aa11.41□□□□□ -0.58
VCL-204ENST00000472585 KIF12Q96FN5 646 aa11.41□□□□□ -0.58
VCL-204ENST00000472585 TRIM34Q9BYJ4 488 aa11.41□□□□□ -0.58
VCL-204ENST00000472585 CCDC8Q9H0W5 538 aaPredicted RBP11.41□□□□□ -0.58
VCL-204ENST00000472585 C1orf115Q9H7X2 142 aa11.41□□□□□ -0.58
VCL-204ENST00000472585 SLC15A5A6NIM6 579 aa11.4□□□□□ -0.58
VCL-204ENST00000472585 GALR2O43603 387 aaPredicted RBP11.4□□□□□ -0.58
VCL-204ENST00000472585 COBLO75128 1261 aa11.4□□□□□ -0.58
VCL-204ENST00000472585 PYGBP11216 843 aa11.4□□□□□ -0.58
VCL-204ENST00000472585 CYBAP13498 195 aa11.4□□□□□ -0.58
VCL-204ENST00000472585 GRB14Q14449 540 aa11.4□□□□□ -0.58
VCL-204ENST00000472585 GRIN2CQ14957 1233 aa11.4□□□□□ -0.58
VCL-204ENST00000472585 RAB3GAP1Q15042 981 aa11.4□□□□□ -0.58
VCL-204ENST00000472585 TRIM60Q495X7 471 aa11.4□□□□□ -0.58
VCL-204ENST00000472585 CCDC158Q5M9N0 1113 aa11.4□□□□□ -0.58
VCL-204ENST00000472585 PRAMEF19Q5SWL8 479 aa11.4□□□□□ -0.58
VCL-204ENST00000472585 ANO1Q5XXA6 986 aa11.4□□□□□ -0.58
VCL-204ENST00000472585 USP38Q8NB14 1042 aa11.4□□□□□ -0.58
VCL-204ENST00000472585 ATXN2LQ8WWM7 1075 aaKnown RBP11.4□□□□□ -0.58
VCL-204ENST00000472585 FRAT1Q92837 279 aaPredicted RBP11.4□□□□□ -0.58
VCL-204ENST00000472585 GAS2L1Q99501 681 aaPredicted RBP11.4□□□□□ -0.58
VCL-204ENST00000472585 NOL10Q9BSC4 688 aaKnown RBP11.4□□□□□ -0.58
VCL-204ENST00000472585 KIAA1683Q9H0B3 1180 aa11.4□□□□□ -0.58
VCL-204ENST00000472585 NOP58Q9Y2X3 529 aaKnown RBP11.4□□□□□ -0.58
VCL-204ENST00000472585 SMIM22K7EJ46 135 aa11.39□□□□□ -0.59
VCL-204ENST00000472585 MAP3K13O43283 966 aa11.39□□□□□ -0.59
VCL-204ENST00000472585 SURF6O75683 361 aaKnown RBP11.39□□□□□ -0.59
VCL-204ENST00000472585 ITGB8P26012 769 aa11.39□□□□□ -0.59
VCL-204ENST00000472585 GABPAQ06546 454 aa11.39□□□□□ -0.59
VCL-204ENST00000472585 MAP3K12Q12852 859 aa11.39□□□□□ -0.59
VCL-204ENST00000472585 SH3RF1Q7Z6J0 888 aa11.39□□□□□ -0.59
VCL-204ENST00000472585 SIAH1Q8IUQ4 282 aa11.39□□□□□ -0.59
VCL-204ENST00000472585 MAGEB6Q8N7X4 407 aa11.39□□□□□ -0.59
VCL-204ENST00000472585 RIOK1Q9BRS2 568 aaKnown RBP11.39□□□□□ -0.59
VCL-204ENST00000472585 EHD4Q9H223 541 aa11.39□□□□□ -0.59
VCL-204ENST00000472585 RPAP3Q9H6T3 665 aaPredicted RBP11.39□□□□□ -0.59
VCL-204ENST00000472585 PDLIM7Q9NR12 457 aa11.39□□□□□ -0.59
VCL-204ENST00000472585 MYO5AQ9Y4I1 1855 aaKnown RBP11.39□□□□□ -0.59
VCL-204ENST00000472585 CDK5RAP2Q96SN8 1893 aa11.38□□□□□ -0.59
VCL-204ENST00000472585 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.38□□□□□ -0.59
VCL-204ENST00000472585 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.38□□□□□ -0.59
VCL-204ENST00000472585 IDH1O75874 414 aaKnown RBP11.38□□□□□ -0.59
VCL-204ENST00000472585 HLA-DOAP06340 250 aa11.38□□□□□ -0.59
VCL-204ENST00000472585 DNAJB2P25686 324 aa11.38□□□□□ -0.59
VCL-204ENST00000472585 SEPT2Q15019 361 aa11.38□□□□□ -0.59
VCL-204ENST00000472585 ABCB5Q2M3G0 1257 aa11.38□□□□□ -0.59
VCL-204ENST00000472585 CERKLQ49MI3 558 aaPredicted RBP11.38□□□□□ -0.59
VCL-204ENST00000472585 ADAMTS19Q8TE59 1207 aa11.38□□□□□ -0.59
VCL-204ENST00000472585 DCBLD2Q96PD2 775 aa11.38□□□□□ -0.59
VCL-204ENST00000472585 ASB2Q96Q27 587 aa11.38□□□□□ -0.59
VCL-204ENST00000472585 UHRF1Q96T88 793 aaPredicted RBP11.38□□□□□ -0.59
VCL-204ENST00000472585 MOV10L1Q9BXT6 1211 aaKnown RBP11.38□□□□□ -0.59
VCL-204ENST00000472585 ZNF576Q9H609 170 aa11.38□□□□□ -0.59
VCL-204ENST00000472585 THEGQ9P2T0 379 aa11.38□□□□□ -0.59
VCL-204ENST00000472585 SERPINB13Q9UIV8 391 aa11.38□□□□□ -0.59
VCL-204ENST00000472585 TACC3Q9Y6A5 838 aa11.38□□□□□ -0.59
VCL-204ENST00000472585 TRIM43BA6NCK2 446 aa11.37□□□□□ -0.59
VCL-204ENST00000472585 RLBP1P12271 317 aa11.37□□□□□ -0.59
VCL-204ENST00000472585 RAG1P15918 1043 aa11.37□□□□□ -0.59
VCL-204ENST00000472585 ADCYAP1R1P41586 468 aa11.37□□□□□ -0.59
VCL-204ENST00000472585 USP5P45974 858 aa11.37□□□□□ -0.59
VCL-204ENST00000472585 MRPS5P82675 430 aaKnown RBP11.37□□□□□ -0.59
VCL-204ENST00000472585 DPP9Q86TI2 863 aa11.37□□□□□ -0.59
VCL-204ENST00000472585 FERMT2Q96AC1 680 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms