RNA–Protein interactions for RNA: ENST00000472479.1

UBE2F-220, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,458 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-220ENST00000472479 LDLRAD1Q5T700 205 aa12.31□□□□□ -0.44
UBE2F-220ENST00000472479 SLFN13Q68D06 897 aa12.31□□□□□ -0.44
UBE2F-220ENST00000472479 POTEHQ6S545 545 aa12.31□□□□□ -0.44
UBE2F-220ENST00000472479 RAB11FIP4Q86YS3 637 aa12.31□□□□□ -0.44
UBE2F-220ENST00000472479 ACER1Q8TDN7 264 aa12.31□□□□□ -0.44
UBE2F-220ENST00000472479 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.31□□□□□ -0.44
UBE2F-220ENST00000472479 LY9Q9HBG7 655 aa12.31□□□□□ -0.44
UBE2F-220ENST00000472479 LIMCH1Q9UPQ0 1083 aa12.31□□□□□ -0.44
UBE2F-220ENST00000472479 SNCAIPQ9Y6H5 919 aa12.31□□□□□ -0.44
UBE2F-220ENST00000472479 DDX60LQ5H9U9 1706 aaKnown RBP12.31□□□□□ -0.44
UBE2F-220ENST00000472479 IGKV6D-41A0A0C4DH26 115 aa12.3□□□□□ -0.44
UBE2F-220ENST00000472479 GOLGA8BA8MQT2 603 aa12.3□□□□□ -0.44
UBE2F-220ENST00000472479 DHX16O60231 1041 aaKnown RBP12.3□□□□□ -0.44
UBE2F-220ENST00000472479 HSP90AA1P07900 732 aaKnown RBP12.3□□□□□ -0.44
UBE2F-220ENST00000472479 CALM1P0DP23 149 aa12.3□□□□□ -0.44
UBE2F-220ENST00000472479 CALM2P0DP24 149 aa12.3□□□□□ -0.44
UBE2F-220ENST00000472479 CALM3P0DP25 149 aa12.3□□□□□ -0.44
UBE2F-220ENST00000472479 ECE1P42892 770 aa12.3□□□□□ -0.44
UBE2F-220ENST00000472479 MTMR2Q13614 643 aa12.3□□□□□ -0.44
UBE2F-220ENST00000472479 COL9A3Q14050 684 aaPredicted RBP12.3□□□□□ -0.44
UBE2F-220ENST00000472479 RGMBQ6NW40 437 aa12.3□□□□□ -0.44
UBE2F-220ENST00000472479 USP17L2Q6R6M4 530 aa12.3□□□□□ -0.44
UBE2F-220ENST00000472479 GADL1Q6ZQY3 521 aa12.3□□□□□ -0.44
UBE2F-220ENST00000472479 MICU3Q86XE3 530 aa12.3□□□□□ -0.44
UBE2F-220ENST00000472479 CCDC144CPQ8IYA2 1237 aa12.3□□□□□ -0.44
UBE2F-220ENST00000472479 ZNF654Q8IZM8 581 aa12.3□□□□□ -0.44
UBE2F-220ENST00000472479 CTCFLQ8NI51 663 aaPredicted RBP12.3□□□□□ -0.44
UBE2F-220ENST00000472479 SLKQ9H2G2 1235 aaPredicted RBP12.3□□□□□ -0.44
UBE2F-220ENST00000472479 TMX2Q9Y320 296 aa12.3□□□□□ -0.44
UBE2F-220ENST00000472479 LAMA4Q16363 1823 aa12.3□□□□□ -0.44
UBE2F-220ENST00000472479 SPDYE5A6NIY4 337 aa12.29□□□□□ -0.44
UBE2F-220ENST00000472479 GOLGA8AA7E2F4 631 aa12.29□□□□□ -0.44
UBE2F-220ENST00000472479 C19orf81C9J6K1 198 aa12.29□□□□□ -0.44
UBE2F-220ENST00000472479 F5H6K3 240 aa12.29□□□□□ -0.44
UBE2F-220ENST00000472479 CPLX1O14810 134 aa12.29□□□□□ -0.44
UBE2F-220ENST00000472479 RXRAP19793 462 aa12.29□□□□□ -0.44
UBE2F-220ENST00000472479 KIF5BP33176 963 aa12.29□□□□□ -0.44
UBE2F-220ENST00000472479 SLC1A4P43007 532 aa12.29□□□□□ -0.44
UBE2F-220ENST00000472479 METAP2P50579 478 aaKnown RBP eCLIP12.29□□□□□ -0.44
UBE2F-220ENST00000472479 APLP1P51693 650 aa12.29□□□□□ -0.44
UBE2F-220ENST00000472479 BACE1P56817 501 aa12.29□□□□□ -0.44
UBE2F-220ENST00000472479 CCT2P78371 535 aaKnown RBP12.29□□□□□ -0.44
UBE2F-220ENST00000472479 KLRC3Q07444 240 aa12.29□□□□□ -0.44
UBE2F-220ENST00000472479 PPIL2Q13356 520 aa12.29□□□□□ -0.44
UBE2F-220ENST00000472479 SEC23AQ15436 765 aa12.29□□□□□ -0.44
UBE2F-220ENST00000472479 CPLX2Q6PUV4 134 aaKnown RBP12.29□□□□□ -0.44
UBE2F-220ENST00000472479 SAPCD2Q86UD0 394 aa12.29□□□□□ -0.44
UBE2F-220ENST00000472479 SPICE1Q8N0Z3 855 aa12.29□□□□□ -0.44
UBE2F-220ENST00000472479 ANKS1AQ92625 1134 aa12.29□□□□□ -0.44
UBE2F-220ENST00000472479 MKL1Q969V6 931 aa12.29□□□□□ -0.44
UBE2F-220ENST00000472479 CCDC102AQ96A19 550 aa12.29□□□□□ -0.44
UBE2F-220ENST00000472479 IL17RAQ96F46 866 aa12.29□□□□□ -0.44
UBE2F-220ENST00000472479 ZSCAN31Q96LW9 406 aaPredicted RBP12.29□□□□□ -0.44
UBE2F-220ENST00000472479 MYL10Q9BUA6 226 aa12.29□□□□□ -0.44
UBE2F-220ENST00000472479 WDR18Q9BV38 432 aa12.29□□□□□ -0.44
UBE2F-220ENST00000472479 ALDH8A1Q9H2A2 487 aaPredicted RBP12.29□□□□□ -0.44
UBE2F-220ENST00000472479 SENP2Q9HC62 589 aa12.29□□□□□ -0.44
UBE2F-220ENST00000472479 CTDP1Q9Y5B0 961 aaPredicted RBP12.29□□□□□ -0.44
UBE2F-220ENST00000472479 TLL2Q9Y6L7 1015 aa12.29□□□□□ -0.44
UBE2F-220ENST00000472479 PLIN4Q96Q06 1357 aa12.29□□□□□ -0.44
UBE2F-220ENST00000472479 CXCL11O14625 94 aa12.28□□□□□ -0.44
UBE2F-220ENST00000472479 PARP1P09874 1014 aaKnown RBP12.28□□□□□ -0.44
UBE2F-220ENST00000472479 HMGCS2P54868 508 aa12.28□□□□□ -0.44
UBE2F-220ENST00000472479 SNAPC2Q13487 334 aa12.28□□□□□ -0.44
UBE2F-220ENST00000472479 TOB2Q14106 344 aaPredicted RBP12.28□□□□□ -0.44
UBE2F-220ENST00000472479 DEFB115Q30KQ5 88 aa12.28□□□□□ -0.44
UBE2F-220ENST00000472479 RCSD1Q6JBY9 416 aa12.28□□□□□ -0.44
UBE2F-220ENST00000472479 SGMS1Q86VZ5 419 aa12.28□□□□□ -0.44
UBE2F-220ENST00000472479 ZNF274Q96GC6 653 aaPredicted RBP12.28□□□□□ -0.44
UBE2F-220ENST00000472479 WNK4Q96J92 1243 aa12.28□□□□□ -0.44
UBE2F-220ENST00000472479 GPCPD1Q9NPB8 672 aa12.28□□□□□ -0.44
UBE2F-220ENST00000472479 TSHZ2Q9NRE2 1034 aa12.28□□□□□ -0.44
UBE2F-220ENST00000472479 AFG3L2Q9Y4W6 797 aa12.28□□□□□ -0.44
UBE2F-220ENST00000472479 CCDC196A0A1B0GTZ2 297 aa12.27□□□□□ -0.44
UBE2F-220ENST00000472479 A0A1W2PRG0 241 aa12.27□□□□□ -0.44
UBE2F-220ENST00000472479 IRF6O14896 467 aa12.27□□□□□ -0.44
UBE2F-220ENST00000472479 DDAH1O94760 285 aa12.27□□□□□ -0.44
UBE2F-220ENST00000472479 GNAQP50148 359 aa12.27□□□□□ -0.44
UBE2F-220ENST00000472479 GTF2A2P52657 109 aa12.27□□□□□ -0.44
UBE2F-220ENST00000472479 RTN1Q16799 776 aa12.27□□□□□ -0.44
UBE2F-220ENST00000472479 FASTKD5Q7L8L6 764 aaKnown RBP12.27□□□□□ -0.44
UBE2F-220ENST00000472479 SIAH1Q8IUQ4 282 aa12.27□□□□□ -0.44
UBE2F-220ENST00000472479 TANGO6Q9C0B7 1094 aa12.27□□□□□ -0.44
UBE2F-220ENST00000472479 KIAA1683Q9H0B3 1180 aa12.27□□□□□ -0.44
UBE2F-220ENST00000472479 VCPKMTQ9H867 229 aa12.27□□□□□ -0.44
UBE2F-220ENST00000472479 BRPF3Q9ULD4 1205 aa12.27□□□□□ -0.44
UBE2F-220ENST00000472479 TPCN1Q9ULQ1 816 aa12.27□□□□□ -0.44
UBE2F-220ENST00000472479 SIPA1L1O43166 1804 aa12.27□□□□□ -0.45
UBE2F-220ENST00000472479 FRMPD2Q68DX3 1309 aaPredicted RBP12.27□□□□□ -0.45
UBE2F-220ENST00000472479 NDUFB10O96000 172 aa12.27□□□□□ -0.45
UBE2F-220ENST00000472479 CETPP11597 493 aa12.27□□□□□ -0.45
UBE2F-220ENST00000472479 BMP3P12645 472 aa12.27□□□□□ -0.45
UBE2F-220ENST00000472479 PDIA3P30101 505 aaKnown RBP12.27□□□□□ -0.45
UBE2F-220ENST00000472479 AKAP17AQ02040 695 aaKnown RBP12.27□□□□□ -0.45
UBE2F-220ENST00000472479 SPRYD7Q5W111 196 aa12.27□□□□□ -0.45
UBE2F-220ENST00000472479 APOA5Q6Q788 366 aa12.27□□□□□ -0.45
UBE2F-220ENST00000472479 KCTD1Q719H9 257 aa12.27□□□□□ -0.45
UBE2F-220ENST00000472479 CCDC82Q8N4S0 544 aa12.27□□□□□ -0.45
UBE2F-220ENST00000472479 FANCBQ8NB91 859 aa12.27□□□□□ -0.45
UBE2F-220ENST00000472479 DCAF4Q8WV16 495 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms