RNA–Protein interactions for RNA: ENST00000472318.1

SCAF4-205, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 3

Gene SCAF4, Length 796 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-205ENST00000472318 SPATA31E1Q6ZUB1 1445 aa9.69□□□□□ -0.86
SCAF4-205ENST00000472318 TFCP2L1Q9NZI6 479 aa9.69□□□□□ -0.86
SCAF4-205ENST00000472318 CD2APQ9Y5K6 639 aa9.69□□□□□ -0.86
SCAF4-205ENST00000472318 USP6P35125 1406 aa9.68□□□□□ -0.86
SCAF4-205ENST00000472318 BRD4O60885 1362 aaPredicted RBP9.68□□□□□ -0.86
SCAF4-205ENST00000472318 EIF3AQ14152 1382 aaKnown RBP9.68□□□□□ -0.86
SCAF4-205ENST00000472318 PRR19A6NJB7 356 aa9.68□□□□□ -0.86
SCAF4-205ENST00000472318 GPR182O15218 404 aa9.68□□□□□ -0.86
SCAF4-205ENST00000472318 COBLO75128 1261 aa9.68□□□□□ -0.86
SCAF4-205ENST00000472318 CPNE3O75131 537 aaKnown RBP9.68□□□□□ -0.86
SCAF4-205ENST00000472318 ZNF423Q2M1K9 1284 aa9.68□□□□□ -0.86
SCAF4-205ENST00000472318 SPRED3Q2MJR0 410 aa9.68□□□□□ -0.86
SCAF4-205ENST00000472318 SGO2Q562F6 1265 aa9.68□□□□□ -0.86
SCAF4-205ENST00000472318 WDR17Q8IZU2 1322 aa9.67□□□□□ -0.86
SCAF4-205ENST00000472318 MED26O95402 600 aa9.67□□□□□ -0.86
SCAF4-205ENST00000472318 MAP4P27816 1152 aaKnown RBP9.67□□□□□ -0.86
SCAF4-205ENST00000472318 EXOSC6Q5RKV6 272 aaKnown RBP9.67□□□□□ -0.86
SCAF4-205ENST00000472318 COL23A1Q86Y22 540 aaPredicted RBP9.67□□□□□ -0.86
SCAF4-205ENST00000472318 C12orf50Q8NA57 414 aaPredicted RBP9.67□□□□□ -0.86
SCAF4-205ENST00000472318 NPHS2Q9NP85 383 aa9.67□□□□□ -0.86
SCAF4-205ENST00000472318 ACEP12821 1306 aa9.66□□□□□ -0.86
SCAF4-205ENST00000472318 IGSF1Q8N6C5 1336 aa9.66□□□□□ -0.86
SCAF4-205ENST00000472318 ARHGEF28Q8N1W1 1705 aaKnown RBP9.66□□□□□ -0.86
SCAF4-205ENST00000472318 B3GALT4O96024 378 aa9.66□□□□□ -0.86
SCAF4-205ENST00000472318 ITPKAP23677 461 aa9.66□□□□□ -0.86
SCAF4-205ENST00000472318 FSTL1Q12841 308 aa9.66□□□□□ -0.86
SCAF4-205ENST00000472318 SHKBP1Q8TBC3 707 aa9.66□□□□□ -0.86
SCAF4-205ENST00000472318 ZNF576Q9H609 170 aa9.66□□□□□ -0.86
SCAF4-205ENST00000472318 TRAK1Q9UPV9 953 aa9.66□□□□□ -0.86
SCAF4-205ENST00000472318 NHSQ6T4R5 1651 aa9.65□□□□□ -0.86
SCAF4-205ENST00000472318 SPINK2P20155 84 aa9.65□□□□□ -0.86
SCAF4-205ENST00000472318 INTS5Q6P9B9 1019 aaKnown RBP9.65□□□□□ -0.86
SCAF4-205ENST00000472318 CCER1Q8TC90 406 aaPredicted RBP9.65□□□□□ -0.86
SCAF4-205ENST00000472318 DNAJC25Q9H1X3 360 aa9.65□□□□□ -0.86
SCAF4-205ENST00000472318 POLR3AO14802 1390 aaPredicted RBP9.64□□□□□ -0.87
SCAF4-205ENST00000472318 GRIK1P39086 918 aa9.64□□□□□ -0.87
SCAF4-205ENST00000472318 PRPF40BQ6NWY9 871 aaKnown RBP9.64□□□□□ -0.87
SCAF4-205ENST00000472318 C2CD4AQ8NCU7 369 aaPredicted RBP9.64□□□□□ -0.87
SCAF4-205ENST00000472318 ALKBH8Q96BT7 664 aaKnown RBP9.64□□□□□ -0.87
SCAF4-205ENST00000472318 TRIM56Q9BRZ2 755 aaKnown RBP9.64□□□□□ -0.87
SCAF4-205ENST00000472318 RBCK1Q9BYM8 510 aa9.64□□□□□ -0.87
SCAF4-205ENST00000472318 EHD4Q9H223 541 aa9.64□□□□□ -0.87
SCAF4-205ENST00000472318 EIF1AYO14602 144 aaKnown RBP9.63□□□□□ -0.87
SCAF4-205ENST00000472318 CYP11A1P05108 521 aa9.63□□□□□ -0.87
SCAF4-205ENST00000472318 CTSBP07858 339 aa9.63□□□□□ -0.87
SCAF4-205ENST00000472318 DRD2P14416 443 aa9.63□□□□□ -0.87
SCAF4-205ENST00000472318 MAOBP27338 520 aa9.63□□□□□ -0.87
SCAF4-205ENST00000472318 PTPN12Q05209 780 aaKnown RBP9.63□□□□□ -0.87
SCAF4-205ENST00000472318 C16orf71Q8IYS4 520 aaPredicted RBP9.63□□□□□ -0.87
SCAF4-205ENST00000472318 CCDC74AQ96AQ1 378 aa9.63□□□□□ -0.87
SCAF4-205ENST00000472318 DMRTB1Q96MA1 342 aa9.63□□□□□ -0.87
SCAF4-205ENST00000472318 ABCB6Q9NP58 842 aa9.63□□□□□ -0.87
SCAF4-205ENST00000472318 AKAP12Q02952 1782 aa9.63□□□□□ -0.87
SCAF4-205ENST00000472318 QSER1Q2KHR3 1735 aa9.62□□□□□ -0.87
SCAF4-205ENST00000472318 ADH5P11766 374 aa9.62□□□□□ -0.87
SCAF4-205ENST00000472318 SOX4Q06945 474 aaPredicted RBP9.62□□□□□ -0.87
SCAF4-205ENST00000472318 MFSD14AQ96MC6 490 aa9.62□□□□□ -0.87
SCAF4-205ENST00000472318 SOWAHDA6NJG2 315 aa9.61□□□□□ -0.87
SCAF4-205ENST00000472318 POU4F3Q15319 338 aa9.61□□□□□ -0.87
SCAF4-205ENST00000472318 HP1BP3Q5SSJ5 553 aaPredicted RBP9.61□□□□□ -0.87
SCAF4-205ENST00000472318 CDPF1Q6NVV7 123 aa9.61□□□□□ -0.87
SCAF4-205ENST00000472318 DTX1Q86Y01 620 aa9.61□□□□□ -0.87
SCAF4-205ENST00000472318 EZH1Q92800 747 aaPredicted RBP9.61□□□□□ -0.87
SCAF4-205ENST00000472318 NIF3L1Q9GZT8 377 aa9.61□□□□□ -0.87
SCAF4-205ENST00000472318 TUBGCP6Q96RT7 1819 aa9.61□□□□□ -0.87
SCAF4-205ENST00000472318 WNK3Q9BYP7 1800 aa9.61□□□□□ -0.87
SCAF4-205ENST00000472318 CICQ96RK0 1608 aaPredicted RBP9.6□□□□□ -0.87
SCAF4-205ENST00000472318 FOXN1O15353 648 aa9.6□□□□□ -0.87
SCAF4-205ENST00000472318 CPSF6Q16630 551 aaKnown RBP eCLIP9.6□□□□□ -0.87
SCAF4-205ENST00000472318 DDX54Q8TDD1 881 aaKnown RBP9.6□□□□□ -0.87
SCAF4-205ENST00000472318 TMC1Q8TDI8 760 aa9.6□□□□□ -0.87
SCAF4-205ENST00000472318 ZFYVE1Q9HBF4 777 aa9.6□□□□□ -0.87
SCAF4-205ENST00000472318 GNEQ9Y223 722 aaKnown RBP9.6□□□□□ -0.87
SCAF4-205ENST00000472318 BTAF1O14981 1849 aa9.6□□□□□ -0.87
SCAF4-205ENST00000472318 ADGRB1O14514 1584 aa9.59□□□□□ -0.87
SCAF4-205ENST00000472318 PPIP5K1Q6PFW1 1433 aa9.59□□□□□ -0.87
SCAF4-205ENST00000472318 FAM95CA0A1B0GW59 222 aa9.59□□□□□ -0.87
SCAF4-205ENST00000472318 WDR64B1ANS9 1081 aa9.59□□□□□ -0.87
SCAF4-205ENST00000472318 USP11P51784 963 aa9.59□□□□□ -0.87
SCAF4-205ENST00000472318 GLIS3Q8NEA6 775 aa9.59□□□□□ -0.87
SCAF4-205ENST00000472318 FBLIM1Q8WUP2 373 aa9.59□□□□□ -0.87
SCAF4-205ENST00000472318 CSRNP1Q96S65 589 aa9.59□□□□□ -0.87
SCAF4-205ENST00000472318 CDK19Q9BWU1 502 aa9.59□□□□□ -0.87
SCAF4-205ENST00000472318 KRTAP9-2Q9BYQ4 174 aa9.59□□□□□ -0.87
SCAF4-205ENST00000472318 ACTL7BQ9Y614 415 aa9.59□□□□□ -0.87
SCAF4-205ENST00000472318 COL18A1P39060 1754 aa9.58□□□□□ -0.88
SCAF4-205ENST00000472318 ECEL1O95672 775 aa9.58□□□□□ -0.88
SCAF4-205ENST00000472318 F13BP05160 661 aa9.58□□□□□ -0.88
SCAF4-205ENST00000472318 RPS26P11Q5JNZ5 115 aaPredicted RBP9.58□□□□□ -0.88
SCAF4-205ENST00000472318 PAOXQ6QHF9 649 aa9.58□□□□□ -0.88
SCAF4-205ENST00000472318 CORO1BQ9BR76 489 aa9.58□□□□□ -0.88
SCAF4-205ENST00000472318 PRDM10Q9NQV6 1147 aa9.58□□□□□ -0.88
SCAF4-205ENST00000472318 PIM2Q9P1W9 311 aa9.58□□□□□ -0.88
SCAF4-205ENST00000472318 CCDC7Q96M83 1385 aa9.58□□□□□ -0.88
SCAF4-205ENST00000472318 SLIT3O75094 1523 aa9.57□□□□□ -0.88
SCAF4-205ENST00000472318 ABCC6O95255 1503 aa9.57□□□□□ -0.88
SCAF4-205ENST00000472318 ADAMTS4O75173 837 aa9.57□□□□□ -0.88
SCAF4-205ENST00000472318 GRM2Q14416 872 aa9.57□□□□□ -0.88
SCAF4-205ENST00000472318 SMIM5Q71RC9 77 aa9.57□□□□□ -0.88
SCAF4-205ENST00000472318 ARHGEF25Q86VW2 580 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 4138.9 ms