RNA–Protein interactions for RNA: ENST00000472129.3

CLTC-204, Transcript of clathrin heavy chain, humanhuman

TSL 2

Gene CLTC, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-204ENST00000472129 CNNM2Q9H8M5 875 aa7.77□□□□□ -1.17
CLTC-204ENST00000472129 NLRC3Q7RTR2 1065 aa7.76□□□□□ -1.17
CLTC-204ENST00000472129 PIWIL2Q8TC59 973 aaKnown RBP7.76□□□□□ -1.17
CLTC-204ENST00000472129 RNF141Q8WVD5 230 aa7.76□□□□□ -1.17
CLTC-204ENST00000472129 VWCEQ96DN2 955 aa7.76□□□□□ -1.17
CLTC-204ENST00000472129 KRTAP4-7Q9BYR0 210 aa7.76□□□□□ -1.17
CLTC-204ENST00000472129 CARS2Q9HA77 564 aaKnown RBP7.76□□□□□ -1.17
CLTC-204ENST00000472129 PODXL2Q9NZ53 605 aa7.76□□□□□ -1.17
CLTC-204ENST00000472129 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.76□□□□□ -1.17
CLTC-204ENST00000472129 LRRN4CLQ8ND94 238 aa7.75□□□□□ -1.17
CLTC-204ENST00000472129 TMEM40Q8WWA1 233 aa7.75□□□□□ -1.17
CLTC-204ENST00000472129 RC3H2Q9HBD1 1191 aaKnown RBP7.75□□□□□ -1.17
CLTC-204ENST00000472129 PPT2Q9UMR5 302 aa7.75□□□□□ -1.17
CLTC-204ENST00000472129 NME1P15531 152 aaKnown RBP7.74□□□□□ -1.17
CLTC-204ENST00000472129 RAD51AP2Q09MP3 1159 aa7.74□□□□□ -1.17
CLTC-204ENST00000472129 SLC23A3Q6PIS1 610 aa7.74□□□□□ -1.17
CLTC-204ENST00000472129 THAP5Q7Z6K1 395 aa7.74□□□□□ -1.17
CLTC-204ENST00000472129 GINM1Q9NU53 330 aa7.74□□□□□ -1.17
CLTC-204ENST00000472129 ZNRF3Q9ULT6 936 aa7.74□□□□□ -1.17
CLTC-204ENST00000472129 MEIS3P2A8K0S8 358 aa7.73□□□□□ -1.17
CLTC-204ENST00000472129 SRFP11831 508 aa7.73□□□□□ -1.17
CLTC-204ENST00000472129 FBXW10Q5XX13 1052 aa7.73□□□□□ -1.17
CLTC-204ENST00000472129 SLC9A7Q96T83 725 aa7.73□□□□□ -1.17
CLTC-204ENST00000472129 ASPNQ9BXN1 380 aa7.73□□□□□ -1.17
CLTC-204ENST00000472129 LMCD1Q9NZU5 365 aa7.73□□□□□ -1.17
CLTC-204ENST00000472129 KCNH3Q9ULD8 1083 aa7.73□□□□□ -1.17
CLTC-204ENST00000472129 SHISA3A0PJX4 238 aa7.72□□□□□ -1.17
CLTC-204ENST00000472129 FAM86C2PA6NEL3 165 aa7.72□□□□□ -1.17
CLTC-204ENST00000472129 ESR1P03372 595 aa7.72□□□□□ -1.17
CLTC-204ENST00000472129 TPP2P29144 1249 aaPredicted RBP7.72□□□□□ -1.17
CLTC-204ENST00000472129 LRRFIP1Q32MZ4 808 aaKnown RBP7.72□□□□□ -1.17
CLTC-204ENST00000472129 OGFOD2Q6N063 350 aa7.72□□□□□ -1.17
CLTC-204ENST00000472129 CCDC81Q6ZN84 652 aa7.72□□□□□ -1.17
CLTC-204ENST00000472129 TMEM192Q8IY95 271 aa7.72□□□□□ -1.17
CLTC-204ENST00000472129 ZNF512BQ96KM6 892 aaPredicted RBP7.72□□□□□ -1.17
CLTC-204ENST00000472129 FERD3LQ96RJ6 166 aa7.72□□□□□ -1.17
CLTC-204ENST00000472129 GPR62Q9BZJ7 368 aa7.72□□□□□ -1.17
CLTC-204ENST00000472129 ACBD3Q9H3P7 528 aa7.72□□□□□ -1.17
CLTC-204ENST00000472129 EFR3BQ9Y2G0 817 aa7.72□□□□□ -1.17
CLTC-204ENST00000472129 ACRP10323 421 aa7.71□□□□□ -1.18
CLTC-204ENST00000472129 ITGB5P18084 799 aa7.71□□□□□ -1.18
CLTC-204ENST00000472129 RBM25P49756 843 aaKnown RBP7.71□□□□□ -1.18
CLTC-204ENST00000472129 CHMP4BP1P59074 171 aa7.71□□□□□ -1.18
CLTC-204ENST00000472129 GAB4Q2WGN9 574 aa7.71□□□□□ -1.18
CLTC-204ENST00000472129 NBPF12Q5TAG4 269 aaPredicted RBP7.71□□□□□ -1.18
CLTC-204ENST00000472129 CREG2Q8IUH2 290 aa7.71□□□□□ -1.18
CLTC-204ENST00000472129 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.71□□□□□ -1.18
CLTC-204ENST00000472129 GPATCH2Q9NW75 528 aa7.71□□□□□ -1.18
CLTC-204ENST00000472129 TNFRSF10CO14798 259 aa7.7□□□□□ -1.18
CLTC-204ENST00000472129 PAPLNO95428 1278 aa7.7□□□□□ -1.18
CLTC-204ENST00000472129 JAG1P78504 1218 aa7.7□□□□□ -1.18
CLTC-204ENST00000472129 SNW1Q13573 536 aaKnown RBP7.7□□□□□ -1.18
CLTC-204ENST00000472129 RUFY4Q6ZNE9 571 aa7.7□□□□□ -1.18
CLTC-204ENST00000472129 TSPYL5Q86VY4 417 aaPredicted RBP7.7□□□□□ -1.18
CLTC-204ENST00000472129 GPRASP2Q96D09 838 aa7.7□□□□□ -1.18
CLTC-204ENST00000472129 TRIT1Q9H3H1 467 aaKnown RBP7.7□□□□□ -1.18
CLTC-204ENST00000472129 CLEC3AO75596 197 aa7.69□□□□□ -1.18
CLTC-204ENST00000472129 TMPRSS7Q7RTY8 843 aa7.69□□□□□ -1.18
CLTC-204ENST00000472129 SLC6A18Q96N87 628 aa7.69□□□□□ -1.18
CLTC-204ENST00000472129 TGIF2Q9GZN2 237 aa7.69□□□□□ -1.18
CLTC-204ENST00000472129 C19orf73Q9NVV2 129 aa7.69□□□□□ -1.18
CLTC-204ENST00000472129 IMPDH2P12268 514 aa7.68□□□□□ -1.18
CLTC-204ENST00000472129 GJA8P48165 433 aa7.68□□□□□ -1.18
CLTC-204ENST00000472129 SOX9P48436 509 aa7.68□□□□□ -1.18
CLTC-204ENST00000472129 NBPF9Q3BBW0 867 aa7.68□□□□□ -1.18
CLTC-204ENST00000472129 RALGPS1Q5JS13 557 aa7.68□□□□□ -1.18
CLTC-204ENST00000472129 TMC3Q7Z5M5 1100 aa7.68□□□□□ -1.18
CLTC-204ENST00000472129 ATG4DQ86TL0 474 aaPredicted RBP7.68□□□□□ -1.18
CLTC-204ENST00000472129 RASGRP4Q8TDF6 673 aa7.68□□□□□ -1.18
CLTC-204ENST00000472129 SLAMF8Q9P0V8 285 aa7.68□□□□□ -1.18
CLTC-204ENST00000472129 DUSP13Q9UII6 198 aa7.68□□□□□ -1.18
CLTC-204ENST00000472129 CTNND2Q9UQB3 1225 aa7.68□□□□□ -1.18
CLTC-204ENST00000472129 DNAJC25-GNG10A0A024R161 153 aa7.67□□□□□ -1.18
CLTC-204ENST00000472129 CCNFP41002 786 aa7.67□□□□□ -1.18
CLTC-204ENST00000472129 RNF4P78317 190 aa7.67□□□□□ -1.18
CLTC-204ENST00000472129 NMIQ13287 307 aaPredicted RBP7.67□□□□□ -1.18
CLTC-204ENST00000472129 ZYXQ15942 572 aaKnown RBP7.67□□□□□ -1.18
CLTC-204ENST00000472129 INTS3Q68E01 1043 aaKnown RBP7.67□□□□□ -1.18
CLTC-204ENST00000472129 LSRQ86X29 649 aaPredicted RBP7.67□□□□□ -1.18
CLTC-204ENST00000472129 MINPP1Q9UNW1 487 aa7.67□□□□□ -1.18
CLTC-204ENST00000472129 PCDHA11Q9Y5I1 949 aa7.67□□□□□ -1.18
CLTC-204ENST00000472129 JUNBP17275 347 aaPredicted RBP7.66□□□□□ -1.18
CLTC-204ENST00000472129 NASPP49321 788 aaPredicted RBP7.66□□□□□ -1.18
CLTC-204ENST00000472129 EGR3Q06889 387 aa7.66□□□□□ -1.18
CLTC-204ENST00000472129 CLEC16AQ2KHT3 1053 aa7.66□□□□□ -1.18
CLTC-204ENST00000472129 RBBP8NLQ8NC74 664 aaPredicted RBP7.66□□□□□ -1.18
CLTC-204ENST00000472129 ALPK1Q96QP1 1244 aa7.66□□□□□ -1.18
CLTC-204ENST00000472129 ADAMTS10Q9H324 1103 aa7.66□□□□□ -1.18
CLTC-204ENST00000472129 CCSER2Q9H7U1 834 aa7.66□□□□□ -1.18
CLTC-204ENST00000472129 INPP5FQ9Y2H2 1132 aa7.66□□□□□ -1.18
CLTC-204ENST00000472129 CARMIL2Q6F5E8 1435 aa7.66□□□□□ -1.18
CLTC-204ENST00000472129 C9IYK1 514 aa7.65□□□□□ -1.18
CLTC-204ENST00000472129 C8AP07357 584 aa7.65□□□□□ -1.18
CLTC-204ENST00000472129 TCF3P15923 654 aa7.65□□□□□ -1.18
CLTC-204ENST00000472129 ERCC5P28715 1186 aaPredicted RBP7.65□□□□□ -1.18
CLTC-204ENST00000472129 LTKP29376 864 aa7.65□□□□□ -1.18
CLTC-204ENST00000472129 COL9A2Q14055 689 aaPredicted RBP7.65□□□□□ -1.18
CLTC-204ENST00000472129 FYB2Q5VWT5 728 aa7.65□□□□□ -1.18
CLTC-204ENST00000472129 POU5F2Q8N7G0 328 aa7.65□□□□□ -1.18
CLTC-204ENST00000472129 FLAD1Q8NFF5 587 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms