RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 ZAP70P43403 619 aa9.53□□□□□ -0.88
CD47-204ENST00000471694 ARMCX5Q6P1M9 558 aa9.53□□□□□ -0.88
CD47-204ENST00000471694 RDH13Q8NBN7 331 aa9.53□□□□□ -0.88
CD47-204ENST00000471694 ZNF496Q96IT1 587 aaPredicted RBP9.53□□□□□ -0.88
CD47-204ENST00000471694 JPH2Q9BR39 696 aaPredicted RBP9.53□□□□□ -0.88
CD47-204ENST00000471694 ARID4AP29374 1257 aaPredicted RBP9.53□□□□□ -0.88
CD47-204ENST00000471694 STX17P56962 302 aa9.53□□□□□ -0.88
CD47-204ENST00000471694 TBC1D9Q6ZT07 1266 aa9.53□□□□□ -0.88
CD47-204ENST00000471694 APPBP2Q92624 585 aa9.53□□□□□ -0.88
CD47-204ENST00000471694 CFAP57Q96MR6 1250 aa9.53□□□□□ -0.88
CD47-204ENST00000471694 WRNIP1Q96S55 665 aa9.53□□□□□ -0.88
CD47-204ENST00000471694 MTUS1Q9ULD2 1270 aa9.53□□□□□ -0.88
CD47-204ENST00000471694 UGGT1Q9NYU2 1555 aa9.52□□□□□ -0.88
CD47-204ENST00000471694 PFDN6O15212 129 aa9.52□□□□□ -0.88
CD47-204ENST00000471694 POLR2BP30876 1174 aaKnown RBP9.52□□□□□ -0.88
CD47-204ENST00000471694 UBASH3AP57075 661 aa9.52□□□□□ -0.88
CD47-204ENST00000471694 SWAP70Q9UH65 585 aa9.52□□□□□ -0.88
CD47-204ENST00000471694 TAF1CQ15572 869 aaPredicted RBP9.52□□□□□ -0.89
CD47-204ENST00000471694 IQUBQ8NA54 791 aa9.52□□□□□ -0.89
CD47-204ENST00000471694 TMEM87BQ96K49 555 aa9.52□□□□□ -0.89
CD47-204ENST00000471694 FAM49AQ9H0Q0 323 aaPredicted RBP9.52□□□□□ -0.89
CD47-204ENST00000471694 UBN1Q9NPG3 1134 aa9.52□□□□□ -0.89
CD47-204ENST00000471694 ATP8A2Q9NTI2 1148 aa9.52□□□□□ -0.89
CD47-204ENST00000471694 TRMT1Q9NXH9 659 aaKnown RBP9.52□□□□□ -0.89
CD47-204ENST00000471694 LRWD1Q9UFC0 647 aa9.52□□□□□ -0.89
CD47-204ENST00000471694 MAP3K15Q6ZN16 1313 aa9.52□□□□□ -0.89
CD47-204ENST00000471694 INO80B-WBP1J3KQ70 363 aa9.52□□□□□ -0.89
CD47-204ENST00000471694 SRGAP2BP0DMP2 458 aa9.52□□□□□ -0.89
CD47-204ENST00000471694 DYMQ7RTS9 669 aa9.52□□□□□ -0.89
CD47-204ENST00000471694 ZBTB38Q8NAP3 1195 aaPredicted RBP9.52□□□□□ -0.89
CD47-204ENST00000471694 INO80BQ9C086 356 aaPredicted RBP9.52□□□□□ -0.89
CD47-204ENST00000471694 CTNND2Q9UQB3 1225 aa9.52□□□□□ -0.89
CD47-204ENST00000471694 A0A1W2PP64 1363 aa9.52□□□□□ -0.89
CD47-204ENST00000471694 SMCO2A6NFE2 343 aa9.52□□□□□ -0.89
CD47-204ENST00000471694 H0YCG3 227 aa9.52□□□□□ -0.89
CD47-204ENST00000471694 K7ENM7 598 aa9.52□□□□□ -0.89
CD47-204ENST00000471694 SLC12A2P55011 1212 aa9.52□□□□□ -0.89
CD47-204ENST00000471694 BSPRYQ5W0U4 402 aa9.52□□□□□ -0.89
CD47-204ENST00000471694 BLMP54132 1417 aaPredicted RBP9.52□□□□□ -0.89
CD47-204ENST00000471694 BBS5Q8N3I7 341 aa9.52□□□□□ -0.89
CD47-204ENST00000471694 AFAP1L2Q8N4X5 818 aa9.52□□□□□ -0.89
CD47-204ENST00000471694 NACC1Q96RE7 527 aa9.52□□□□□ -0.89
CD47-204ENST00000471694 GDPD2Q9HCC8 539 aa9.52□□□□□ -0.89
CD47-204ENST00000471694 CELF2O95319 508 aaKnown RBP9.51□□□□□ -0.89
CD47-204ENST00000471694 DSTYKQ6XUX3 929 aa9.51□□□□□ -0.89
CD47-204ENST00000471694 MMP19Q99542 508 aa9.51□□□□□ -0.89
CD47-204ENST00000471694 PPARAQ07869 468 aa9.51□□□□□ -0.89
CD47-204ENST00000471694 HERC4Q5GLZ8 1057 aaPredicted RBP9.51□□□□□ -0.89
CD47-204ENST00000471694 ARAP3Q8WWN8 1544 aa9.51□□□□□ -0.89
CD47-204ENST00000471694 TACC1O75410 805 aa9.51□□□□□ -0.89
CD47-204ENST00000471694 SLC4A1P02730 911 aa9.51□□□□□ -0.89
CD47-204ENST00000471694 LRMPQ12912 555 aa9.51□□□□□ -0.89
CD47-204ENST00000471694 DHX32Q7L7V1 743 aaKnown RBP9.51□□□□□ -0.89
CD47-204ENST00000471694 ANKRD36BP1Q96IX9 119 aa9.51□□□□□ -0.89
CD47-204ENST00000471694 DBNDD2Q9BQY9 259 aa9.51□□□□□ -0.89
CD47-204ENST00000471694 NUCKS1Q9H1E3 243 aaKnown RBP9.51□□□□□ -0.89
CD47-204ENST00000471694 EDC4Q6P2E9 1401 aaKnown RBP9.51□□□□□ -0.89
CD47-204ENST00000471694 ASXL1Q8IXJ9 1541 aa9.51□□□□□ -0.89
CD47-204ENST00000471694 SLC27A3Q5K4L6 730 aa9.51□□□□□ -0.89
CD47-204ENST00000471694 CREB3L3Q68CJ9 461 aa9.51□□□□□ -0.89
CD47-204ENST00000471694 PPP4R4Q6NUP7 873 aa9.51□□□□□ -0.89
CD47-204ENST00000471694 REXO1Q8N1G1 1221 aaKnown RBP9.51□□□□□ -0.89
CD47-204ENST00000471694 SPDYE1Q8NFV5 336 aaPredicted RBP9.51□□□□□ -0.89
CD47-204ENST00000471694 MRPS27Q92552 414 aaKnown RBP9.51□□□□□ -0.89
CD47-204ENST00000471694 ATP7AQ04656 1500 aa9.51□□□□□ -0.89
CD47-204ENST00000471694 UGGT2Q9NYU1 1516 aa9.51□□□□□ -0.89
CD47-204ENST00000471694 SPTLC2O15270 562 aa9.51□□□□□ -0.89
CD47-204ENST00000471694 PDE6AP16499 860 aa9.51□□□□□ -0.89
CD47-204ENST00000471694 MCTP2Q6DN12 878 aa9.51□□□□□ -0.89
CD47-204ENST00000471694 TSHZ2Q9NRE2 1034 aa9.51□□□□□ -0.89
CD47-204ENST00000471694 ZHX2Q9Y6X8 837 aa9.51□□□□□ -0.89
CD47-204ENST00000471694 HSF2BPO75031 334 aa9.51□□□□□ -0.89
CD47-204ENST00000471694 STAM2O75886 525 aa9.51□□□□□ -0.89
CD47-204ENST00000471694 PDE1AP54750 535 aa9.51□□□□□ -0.89
CD47-204ENST00000471694 FBXW4P57775 412 aa9.51□□□□□ -0.89
CD47-204ENST00000471694 ASIC2Q16515 512 aa9.51□□□□□ -0.89
CD47-204ENST00000471694 IWS1Q96ST2 819 aa9.51□□□□□ -0.89
CD47-204ENST00000471694 KDRP35968 1356 aa9.51□□□□□ -0.89
CD47-204ENST00000471694 GOLGA8CPA6NN73 597 aa9.5□□□□□ -0.89
CD47-204ENST00000471694 CETN3O15182 167 aa9.5□□□□□ -0.89
CD47-204ENST00000471694 NELFCDQ8IXH7 590 aa9.5□□□□□ -0.89
CD47-204ENST00000471694 TRIM7Q9C029 511 aa9.5□□□□□ -0.89
CD47-204ENST00000471694 RTL1A6NKG5 1358 aa9.5□□□□□ -0.89
CD47-204ENST00000471694 USP17L12C9JPN9 530 aa9.5□□□□□ -0.89
CD47-204ENST00000471694 USP17L21D6R901 530 aa9.5□□□□□ -0.89
CD47-204ENST00000471694 ECE2O60344 883 aa9.5□□□□□ -0.89
CD47-204ENST00000471694 SPECC1LQ69YQ0 1117 aa9.5□□□□□ -0.89
CD47-204ENST00000471694 NUDT18Q6ZVK8 323 aa9.5□□□□□ -0.89
CD47-204ENST00000471694 PALM2Q8IXS6 379 aa9.5□□□□□ -0.89
CD47-204ENST00000471694 CTTNBP2Q8WZ74 1663 aa9.5□□□□□ -0.89
CD47-204ENST00000471694 ANAPC5Q9UJX4 755 aa9.5□□□□□ -0.89
CD47-204ENST00000471694 KIAA0556O60303 1618 aa9.5□□□□□ -0.89
CD47-204ENST00000471694 PALLDQ8WX93 1383 aa9.5□□□□□ -0.89
CD47-204ENST00000471694 JCADQ9P266 1359 aa9.5□□□□□ -0.89
CD47-204ENST00000471694 SMIM23A6NLE4 172 aa9.5□□□□□ -0.89
CD47-204ENST00000471694 PIK3CAP42336 1068 aa9.5□□□□□ -0.89
CD47-204ENST00000471694 CYP2J2P51589 502 aa9.5□□□□□ -0.89
CD47-204ENST00000471694 NME8Q8N427 588 aa9.5□□□□□ -0.89
CD47-204ENST00000471694 MRRFQ96E11 262 aaKnown RBP9.5□□□□□ -0.89
CD47-204ENST00000471694 SUCLG2Q96I99 432 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms