RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 FAM43AQ8N2R8 423 aa10.69□□□□□ -0.7
PTPRE-207ENST00000471218 RAET1EQ8TD07 263 aa10.69□□□□□ -0.7
PTPRE-207ENST00000471218 IGDCC4Q8TDY8 1250 aa10.69□□□□□ -0.7
PTPRE-207ENST00000471218 SDR42E1Q8WUS8 393 aa10.69□□□□□ -0.7
PTPRE-207ENST00000471218 MAP3K14Q99558 947 aa10.69□□□□□ -0.7
PTPRE-207ENST00000471218 ANP32EQ9BTT0 268 aa10.69□□□□□ -0.7
PTPRE-207ENST00000471218 IDI2Q9BXS1 227 aa10.69□□□□□ -0.7
PTPRE-207ENST00000471218 EHD4Q9H223 541 aa10.69□□□□□ -0.7
PTPRE-207ENST00000471218 DHX36Q9H2U1 1008 aaKnown RBP10.69□□□□□ -0.7
PTPRE-207ENST00000471218 TCP11L1Q9NUJ3 509 aa10.69□□□□□ -0.7
PTPRE-207ENST00000471218 MCM9Q9NXL9 1143 aa10.69□□□□□ -0.7
PTPRE-207ENST00000471218 SWAP70Q9UH65 585 aa10.69□□□□□ -0.7
PTPRE-207ENST00000471218 PLIN4Q96Q06 1357 aa10.68□□□□□ -0.7
PTPRE-207ENST00000471218 FLT1P17948 1338 aa10.68□□□□□ -0.7
PTPRE-207ENST00000471218 DDX60LQ5H9U9 1706 aaKnown RBP10.68□□□□□ -0.7
PTPRE-207ENST00000471218 B4E1Z4 1266 aa10.68□□□□□ -0.7
PTPRE-207ENST00000471218 BTBD19C9JJ37 291 aa10.68□□□□□ -0.7
PTPRE-207ENST00000471218 CXCL11O14625 94 aa10.68□□□□□ -0.7
PTPRE-207ENST00000471218 IRF6O14896 467 aa10.68□□□□□ -0.7
PTPRE-207ENST00000471218 FXR1P51114 621 aaKnown RBP eCLIP10.68□□□□□ -0.7
PTPRE-207ENST00000471218 DIXDC1Q155Q3 683 aa10.68□□□□□ -0.7
PTPRE-207ENST00000471218 TMEM67Q5HYA8 995 aa10.68□□□□□ -0.7
PTPRE-207ENST00000471218 APOA5Q6Q788 366 aa10.68□□□□□ -0.7
PTPRE-207ENST00000471218 C17orf99Q6UX52 265 aa10.68□□□□□ -0.7
PTPRE-207ENST00000471218 FASTKD5Q7L8L6 764 aaKnown RBP10.68□□□□□ -0.7
PTPRE-207ENST00000471218 CCDC83Q8IWF9 413 aa10.68□□□□□ -0.7
PTPRE-207ENST00000471218 FAM177A1Q8N128 213 aaPredicted RBP10.68□□□□□ -0.7
PTPRE-207ENST00000471218 SH3RF3Q8TEJ3 882 aaPredicted RBP10.68□□□□□ -0.7
PTPRE-207ENST00000471218 FAM151AQ8WW52 585 aa10.68□□□□□ -0.7
PTPRE-207ENST00000471218 ANKS1AQ92625 1134 aa10.68□□□□□ -0.7
PTPRE-207ENST00000471218 DPF3Q92784 378 aa10.68□□□□□ -0.7
PTPRE-207ENST00000471218 PARK7Q99497 189 aaKnown RBP10.68□□□□□ -0.7
PTPRE-207ENST00000471218 LY9Q9HBG7 655 aa10.68□□□□□ -0.7
PTPRE-207ENST00000471218 ZSWIM5Q9P217 1185 aa10.68□□□□□ -0.7
PTPRE-207ENST00000471218 SRRDQ9UH36 339 aa10.68□□□□□ -0.7
PTPRE-207ENST00000471218 CEP290O15078 2479 aa10.67□□□□□ -0.7
PTPRE-207ENST00000471218 STK36Q9NRP7 1315 aa10.67□□□□□ -0.7
PTPRE-207ENST00000471218 KLF18A0A0U1RQI7 1052 aa10.67□□□□□ -0.7
PTPRE-207ENST00000471218 GOLGA8BA8MQT2 603 aa10.67□□□□□ -0.7
PTPRE-207ENST00000471218 MINDY4BA8MYZ0 360 aa10.67□□□□□ -0.7
PTPRE-207ENST00000471218 IFIT3O14879 490 aaKnown RBP10.67□□□□□ -0.7
PTPRE-207ENST00000471218 ZBTB43O43298 467 aa10.67□□□□□ -0.7
PTPRE-207ENST00000471218 STX6O43752 255 aa10.67□□□□□ -0.7
PTPRE-207ENST00000471218 KDM4AO75164 1064 aa10.67□□□□□ -0.7
PTPRE-207ENST00000471218 DDAH1O94760 285 aa10.67□□□□□ -0.7
PTPRE-207ENST00000471218 LARGE1O95461 756 aa10.67□□□□□ -0.7
PTPRE-207ENST00000471218 FMNL1O95466 1100 aaPredicted RBP10.67□□□□□ -0.7
PTPRE-207ENST00000471218 GJB1P08034 283 aa10.67□□□□□ -0.7
PTPRE-207ENST00000471218 GRK4P32298 578 aa10.67□□□□□ -0.7
PTPRE-207ENST00000471218 PSMC4P43686 418 aa10.67□□□□□ -0.7
PTPRE-207ENST00000471218 WTAPQ15007 396 aa10.67□□□□□ -0.7
PTPRE-207ENST00000471218 NFKBIBQ15653 356 aa10.67□□□□□ -0.7
PTPRE-207ENST00000471218 GRIK5Q16478 980 aa10.67□□□□□ -0.7
PTPRE-207ENST00000471218 APOBEC3HQ6NTF7 200 aaKnown RBP10.67□□□□□ -0.7
PTPRE-207ENST00000471218 C16orf86Q6ZW13 317 aa10.67□□□□□ -0.7
PTPRE-207ENST00000471218 DGKHQ86XP1 1220 aa10.67□□□□□ -0.7
PTPRE-207ENST00000471218 TNPO1Q92973 898 aaKnown RBP10.67□□□□□ -0.7
PTPRE-207ENST00000471218 RBM27Q9P2N5 1060 aaKnown RBP10.67□□□□□ -0.7
PTPRE-207ENST00000471218 COLQQ9Y215 455 aaPredicted RBP10.67□□□□□ -0.7
PTPRE-207ENST00000471218 SLC12A7Q9Y666 1083 aa10.67□□□□□ -0.7
PTPRE-207ENST00000471218 SNCAIPQ9Y6H5 919 aa10.67□□□□□ -0.7
PTPRE-207ENST00000471218 ATRNL1Q5VV63 1379 aa10.66□□□□□ -0.7
PTPRE-207ENST00000471218 CCDC69A6NI79 296 aa10.66□□□□□ -0.7
PTPRE-207ENST00000471218 PDHXO00330 501 aa10.66□□□□□ -0.7
PTPRE-207ENST00000471218 ENTPD3O75355 529 aa10.66□□□□□ -0.7
PTPRE-207ENST00000471218 ZSCAN22P10073 491 aaPredicted RBP10.66□□□□□ -0.7
PTPRE-207ENST00000471218 SYT1P21579 422 aa10.66□□□□□ -0.7
PTPRE-207ENST00000471218 GJB2P29033 226 aa10.66□□□□□ -0.7
PTPRE-207ENST00000471218 MCM4P33991 863 aa10.66□□□□□ -0.7
PTPRE-207ENST00000471218 GJA8P48165 433 aa10.66□□□□□ -0.7
PTPRE-207ENST00000471218 FCGRTP55899 365 aa10.66□□□□□ -0.7
PTPRE-207ENST00000471218 CTDSPL2Q05D32 466 aa10.66□□□□□ -0.7
PTPRE-207ENST00000471218 APOBRQ0VD83 1088 aa10.66□□□□□ -0.7
PTPRE-207ENST00000471218 ST3GAL1Q11201 340 aa10.66□□□□□ -0.7
PTPRE-207ENST00000471218 SCRN1Q12765 414 aa10.66□□□□□ -0.7
PTPRE-207ENST00000471218 SEC23AQ15436 765 aa10.66□□□□□ -0.7
PTPRE-207ENST00000471218 CSPP1Q1MSJ5 1256 aa10.66□□□□□ -0.7
PTPRE-207ENST00000471218 SKOR2Q2VWA4 1001 aaPredicted RBP10.66□□□□□ -0.7
PTPRE-207ENST00000471218 ATL3Q6DD88 541 aa10.66□□□□□ -0.7
PTPRE-207ENST00000471218 CYB5R4Q7L1T6 521 aa10.66□□□□□ -0.7
PTPRE-207ENST00000471218 SLAIN1Q8ND83 568 aa10.66□□□□□ -0.7
PTPRE-207ENST00000471218 NSUN7Q8NE18 718 aaKnown RBP10.66□□□□□ -0.7
PTPRE-207ENST00000471218 TGFBRAP1Q8WUH2 860 aa10.66□□□□□ -0.7
PTPRE-207ENST00000471218 CNKSR2Q8WXI2 1034 aa10.66□□□□□ -0.7
PTPRE-207ENST00000471218 WASF1Q92558 559 aa10.66□□□□□ -0.7
PTPRE-207ENST00000471218 ZKSCAN4Q969J2 545 aaPredicted RBP10.66□□□□□ -0.7
PTPRE-207ENST00000471218 ZSCAN10Q96SZ4 725 aaPredicted RBP10.66□□□□□ -0.7
PTPRE-207ENST00000471218 RBM28Q9NW13 759 aaKnown RBP10.66□□□□□ -0.7
PTPRE-207ENST00000471218 BIN2Q9UBW5 565 aaPredicted RBP10.66□□□□□ -0.7
PTPRE-207ENST00000471218 ZNF112Q9UJU3 913 aa10.66□□□□□ -0.7
PTPRE-207ENST00000471218 KCNH4Q9UQ05 1017 aa10.66□□□□□ -0.7
PTPRE-207ENST00000471218 MYH2Q9UKX2 1941 aa10.65□□□□□ -0.7
PTPRE-207ENST00000471218 A0A1W2PPC1 479 aa10.65□□□□□ -0.7
PTPRE-207ENST00000471218 CPLX1O14810 134 aa10.65□□□□□ -0.7
PTPRE-207ENST00000471218 POLR3DP05423 398 aaPredicted RBP10.65□□□□□ -0.7
PTPRE-207ENST00000471218 HLA-DOAP06340 250 aa10.65□□□□□ -0.7
PTPRE-207ENST00000471218 NOVP48745 357 aa10.65□□□□□ -0.7
PTPRE-207ENST00000471218 METAP2P50579 478 aaKnown RBP eCLIP10.65□□□□□ -0.7
PTPRE-207ENST00000471218 NOL9Q5SY16 702 aaKnown RBP10.65□□□□□ -0.7
PTPRE-207ENST00000471218 NOL8Q76FK4 1167 aaKnown RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms