RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 APOBRQ0VD83 1088 aa7.58□□□□□ -1.2
BRCA1-210ENST00000471181 SLC9C2Q5TAH2 1124 aa7.58□□□□□ -1.2
BRCA1-210ENST00000471181 CNNM4Q6P4Q7 775 aa7.58□□□□□ -1.2
BRCA1-210ENST00000471181 PEX26Q7Z412 305 aa7.58□□□□□ -1.2
BRCA1-210ENST00000471181 SYCE1Q8N0S2 351 aa7.58□□□□□ -1.2
BRCA1-210ENST00000471181 MYCT1Q8N699 235 aa7.58□□□□□ -1.2
BRCA1-210ENST00000471181 IQUBQ8NA54 791 aa7.58□□□□□ -1.2
BRCA1-210ENST00000471181 WDR48Q8TAF3 677 aa7.58□□□□□ -1.2
BRCA1-210ENST00000471181 ACSBG1Q96GR2 724 aa7.58□□□□□ -1.2
BRCA1-210ENST00000471181 FAM193BQ96PV7 902 aaPredicted RBP7.58□□□□□ -1.2
BRCA1-210ENST00000471181 MAD1L1Q9Y6D9 718 aa7.58□□□□□ -1.2
BRCA1-210ENST00000471181 PTPRGP23470 1445 aa7.58□□□□□ -1.2
BRCA1-210ENST00000471181 P4HA1P13674 534 aa7.58□□□□□ -1.2
BRCA1-210ENST00000471181 ZNF449Q6P9G9 518 aa7.58□□□□□ -1.2
BRCA1-210ENST00000471181 ANKLE2Q86XL3 938 aa7.58□□□□□ -1.2
BRCA1-210ENST00000471181 MAGEB6Q8N7X4 407 aa7.58□□□□□ -1.2
BRCA1-210ENST00000471181 UHMK1Q8TAS1 419 aaKnown RBP7.58□□□□□ -1.2
BRCA1-210ENST00000471181 PALMDQ9NP74 551 aa7.58□□□□□ -1.2
BRCA1-210ENST00000471181 RIC8AQ9NPQ8 531 aa7.58□□□□□ -1.2
BRCA1-210ENST00000471181 NR1I2O75469 434 aa7.57□□□□□ -1.2
BRCA1-210ENST00000471181 CLTAP09496 248 aa7.57□□□□□ -1.2
BRCA1-210ENST00000471181 PTPROQ16827 1216 aa7.57□□□□□ -1.2
BRCA1-210ENST00000471181 CARD6Q9BX69 1037 aa7.57□□□□□ -1.2
BRCA1-210ENST00000471181 DBF4Q9UBU7 674 aaPredicted RBP7.57□□□□□ -1.2
BRCA1-210ENST00000471181 RBM8AQ9Y5S9 174 aaKnown RBP7.57□□□□□ -1.2
BRCA1-210ENST00000471181 PRPSAP1Q14558 356 aa7.57□□□□□ -1.2
BRCA1-210ENST00000471181 RPS6KA1Q15418 735 aa7.57□□□□□ -1.2
BRCA1-210ENST00000471181 MAIP1Q8WWC4 291 aa7.57□□□□□ -1.2
BRCA1-210ENST00000471181 EPS15L1Q9UBC2 864 aa7.57□□□□□ -1.2
BRCA1-210ENST00000471181 PARP2Q9UGN5 583 aa7.57□□□□□ -1.2
BRCA1-210ENST00000471181 TTF2Q9UNY4 1162 aaKnown RBP7.57□□□□□ -1.2
BRCA1-210ENST00000471181 TNNI1P19237 187 aa7.57□□□□□ -1.2
BRCA1-210ENST00000471181 TRIM14Q14142 442 aa7.57□□□□□ -1.2
BRCA1-210ENST00000471181 NELFCDQ8IXH7 590 aa7.57□□□□□ -1.2
BRCA1-210ENST00000471181 AFAP1Q8N556 730 aa7.57□□□□□ -1.2
BRCA1-210ENST00000471181 MMS19Q96T76 1030 aa7.57□□□□□ -1.2
BRCA1-210ENST00000471181 ZNF277Q9NRM2 450 aaPredicted RBP7.57□□□□□ -1.2
BRCA1-210ENST00000471181 CDV3Q9UKY7 258 aaKnown RBP7.57□□□□□ -1.2
BRCA1-210ENST00000471181 GCNT3O95395 438 aa7.57□□□□□ -1.2
BRCA1-210ENST00000471181 LMNAP02545 664 aaKnown RBP7.57□□□□□ -1.2
BRCA1-210ENST00000471181 ATF7P17544 494 aaPredicted RBP7.57□□□□□ -1.2
BRCA1-210ENST00000471181 SNCBQ16143 134 aa7.57□□□□□ -1.2
BRCA1-210ENST00000471181 MCMDC2Q4G0Z9 681 aa7.57□□□□□ -1.2
BRCA1-210ENST00000471181 LMCD1Q9NZU5 365 aa7.57□□□□□ -1.2
BRCA1-210ENST00000471181 SUGT1Q9Y2Z0 365 aa7.57□□□□□ -1.2
BRCA1-210ENST00000471181 IGF1RP08069 1367 aa7.57□□□□□ -1.2
BRCA1-210ENST00000471181 SYNRGQ9UMZ2 1314 aa7.57□□□□□ -1.2
BRCA1-210ENST00000471181 EXOC3O60645 756 aa7.57□□□□□ -1.2
BRCA1-210ENST00000471181 LMNB1P20700 586 aa7.57□□□□□ -1.2
BRCA1-210ENST00000471181 KAZNQ674X7 775 aa7.57□□□□□ -1.2
BRCA1-210ENST00000471181 HACE1Q8IYU2 909 aa7.57□□□□□ -1.2
BRCA1-210ENST00000471181 METTL13Q8N6R0 699 aa7.57□□□□□ -1.2
BRCA1-210ENST00000471181 ERO1AQ96HE7 468 aa7.57□□□□□ -1.2
BRCA1-210ENST00000471181 COG4Q9H9E3 785 aa7.57□□□□□ -1.2
BRCA1-210ENST00000471181 SPATS2LQ9NUQ6 558 aaKnown RBP7.57□□□□□ -1.2
BRCA1-210ENST00000471181 SLC4A7Q9Y6M7 1214 aa7.57□□□□□ -1.2
BRCA1-210ENST00000471181 HEXIM1O94992 359 aaKnown RBP7.56□□□□□ -1.2
BRCA1-210ENST00000471181 CCDC159P0C7I6 412 aa7.56□□□□□ -1.2
BRCA1-210ENST00000471181 BCRP11274 1271 aa7.56□□□□□ -1.2
BRCA1-210ENST00000471181 TXKP42681 527 aa7.56□□□□□ -1.2
BRCA1-210ENST00000471181 ELF2Q15723 593 aa7.56□□□□□ -1.2
BRCA1-210ENST00000471181 HIF1AQ16665 826 aa7.56□□□□□ -1.2
BRCA1-210ENST00000471181 SPATS2Q86XZ4 545 aaKnown RBP7.56□□□□□ -1.2
BRCA1-210ENST00000471181 CSGALNACT2Q8N6G5 542 aa7.56□□□□□ -1.2
BRCA1-210ENST00000471181 TEKT1Q969V4 418 aa7.56□□□□□ -1.2
BRCA1-210ENST00000471181 HOOK2Q96ED9 719 aa7.56□□□□□ -1.2
BRCA1-210ENST00000471181 DACH2Q96NX9 599 aa7.56□□□□□ -1.2
BRCA1-210ENST00000471181 SH2D4AQ9H788 454 aa7.56□□□□□ -1.2
BRCA1-210ENST00000471181 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.56□□□□□ -1.2
BRCA1-210ENST00000471181 PARP3Q9Y6F1 533 aa7.56□□□□□ -1.2
BRCA1-210ENST00000471181 A6NNZ2 444 aa7.56□□□□□ -1.2
BRCA1-210ENST00000471181 EEF1GP26641 437 aaKnown RBP7.56□□□□□ -1.2
BRCA1-210ENST00000471181 ATP1A2P50993 1020 aa7.56□□□□□ -1.2
BRCA1-210ENST00000471181 POLE2P56282 527 aa7.56□□□□□ -1.2
BRCA1-210ENST00000471181 TUBB8Q3ZCM7 444 aa7.56□□□□□ -1.2
BRCA1-210ENST00000471181 CFAP221Q4G0U5 840 aa7.56□□□□□ -1.2
BRCA1-210ENST00000471181 GRAMD4Q6IC98 578 aa7.56□□□□□ -1.2
BRCA1-210ENST00000471181 DDX42Q86XP3 938 aaKnown RBP eCLIP7.56□□□□□ -1.2
BRCA1-210ENST00000471181 GANCQ8TET4 914 aa7.56□□□□□ -1.2
BRCA1-210ENST00000471181 U2AF1L4Q8WU68 220 aaKnown RBP7.56□□□□□ -1.2
BRCA1-210ENST00000471181 RAB17Q9H0T7 212 aa7.56□□□□□ -1.2
BRCA1-210ENST00000471181 POLKQ9UBT6 870 aa7.56□□□□□ -1.2
BRCA1-210ENST00000471181 ZKSCAN5Q9Y2L8 839 aa7.56□□□□□ -1.2
BRCA1-210ENST00000471181 THAP12O43422 761 aa7.56□□□□□ -1.2
BRCA1-210ENST00000471181 ATP6V1AP38606 617 aa7.56□□□□□ -1.2
BRCA1-210ENST00000471181 PLCD1P51178 756 aa7.56□□□□□ -1.2
BRCA1-210ENST00000471181 KLHL30Q0D2K2 578 aa7.56□□□□□ -1.2
BRCA1-210ENST00000471181 GJC2Q5T442 439 aaPredicted RBP7.56□□□□□ -1.2
BRCA1-210ENST00000471181 SFMBT2Q5VUG0 894 aa7.56□□□□□ -1.2
BRCA1-210ENST00000471181 HAUS3Q68CZ6 603 aa7.56□□□□□ -1.2
BRCA1-210ENST00000471181 PIK3AP1Q6ZUJ8 805 aa7.56□□□□□ -1.2
BRCA1-210ENST00000471181 DYMQ7RTS9 669 aa7.56□□□□□ -1.2
BRCA1-210ENST00000471181 LRRC8CQ8TDW0 803 aa7.56□□□□□ -1.2
BRCA1-210ENST00000471181 HACD3Q9P035 362 aa7.56□□□□□ -1.2
BRCA1-210ENST00000471181 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.56□□□□□ -1.2
BRCA1-210ENST00000471181 NBNO60934 754 aa7.56□□□□□ -1.2
BRCA1-210ENST00000471181 YWHAEP62258 255 aaKnown RBP7.56□□□□□ -1.2
BRCA1-210ENST00000471181 MYL5Q02045 173 aa7.56□□□□□ -1.2
BRCA1-210ENST00000471181 UBE3AQ05086 875 aa7.56□□□□□ -1.2
BRCA1-210ENST00000471181 TTC19Q6DKK2 380 aaPredicted RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms