RNA–Protein interactions for RNA: ENST00000470951.5

SRGAP3-204, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 2,334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-204ENST00000470951 ZC3H12AQ5D1E8 599 aaKnown RBP12.78□□□□□ -0.36
SRGAP3-204ENST00000470951 CYP26C1Q6V0L0 522 aa12.78□□□□□ -0.36
SRGAP3-204ENST00000470951 CYB5R4Q7L1T6 521 aa12.78□□□□□ -0.36
SRGAP3-204ENST00000470951 PACS2Q86VP3 889 aa12.78□□□□□ -0.36
SRGAP3-204ENST00000470951 XAGE2Q96GT9 111 aa12.78□□□□□ -0.36
SRGAP3-204ENST00000470951 RPGRIP1Q96KN7 1286 aa12.78□□□□□ -0.36
SRGAP3-204ENST00000470951 RHOXF2Q9BQY4 288 aa12.78□□□□□ -0.36
SRGAP3-204ENST00000470951 MYO6Q9UM54 1294 aa12.78□□□□□ -0.36
SRGAP3-204ENST00000470951 GLI3P10071 1580 aa12.78□□□□□ -0.36
SRGAP3-204ENST00000470951 ANKRD33BA6NCL7 494 aa12.77□□□□□ -0.36
SRGAP3-204ENST00000470951 TOB1P50616 345 aaPredicted RBP12.77□□□□□ -0.36
SRGAP3-204ENST00000470951 MICU3Q86XE3 530 aa12.77□□□□□ -0.36
SRGAP3-204ENST00000470951 IGDCC4Q8TDY8 1250 aa12.77□□□□□ -0.36
SRGAP3-204ENST00000470951 AFAP1L1Q8TED9 768 aa12.77□□□□□ -0.36
SRGAP3-204ENST00000470951 GSDMAQ96QA5 445 aa12.77□□□□□ -0.36
SRGAP3-204ENST00000470951 FAM204AQ9H8W3 233 aa12.77□□□□□ -0.36
SRGAP3-204ENST00000470951 FAM217BQ9NTX9 383 aaPredicted RBP12.77□□□□□ -0.36
SRGAP3-204ENST00000470951 IQSEC3Q9UPP2 1182 aaPredicted RBP12.77□□□□□ -0.36
SRGAP3-204ENST00000470951 TARSL2A2RTX5 802 aaKnown RBP12.77□□□□□ -0.37
SRGAP3-204ENST00000470951 PIP4K2AP48426 406 aaPredicted RBP12.77□□□□□ -0.37
SRGAP3-204ENST00000470951 BIRC2Q13490 618 aa12.77□□□□□ -0.37
SRGAP3-204ENST00000470951 ZNF827Q17R98 1081 aa12.77□□□□□ -0.37
SRGAP3-204ENST00000470951 NFXL1Q6ZNB6 911 aa12.77□□□□□ -0.37
SRGAP3-204ENST00000470951 TRIM22Q8IYM9 498 aa12.77□□□□□ -0.37
SRGAP3-204ENST00000470951 ANKRD13AQ8IZ07 590 aa12.77□□□□□ -0.37
SRGAP3-204ENST00000470951 LY9Q9HBG7 655 aa12.77□□□□□ -0.37
SRGAP3-204ENST00000470951 AATFQ9NY61 560 aaKnown RBP eCLIP12.77□□□□□ -0.37
SRGAP3-204ENST00000470951 LRP6O75581 1613 aa12.77□□□□□ -0.37
SRGAP3-204ENST00000470951 LRRC10BA6NIK2 292 aa12.76□□□□□ -0.37
SRGAP3-204ENST00000470951 GYPCP04921 128 aa12.76□□□□□ -0.37
SRGAP3-204ENST00000470951 CASP14P31944 242 aa12.76□□□□□ -0.37
SRGAP3-204ENST00000470951 MAP2K2P36507 400 aa12.76□□□□□ -0.37
SRGAP3-204ENST00000470951 EIF5P55010 431 aaKnown RBP12.76□□□□□ -0.37
SRGAP3-204ENST00000470951 SPAG1Q07617 926 aa12.76□□□□□ -0.37
SRGAP3-204ENST00000470951 TTF1Q15361 905 aaPredicted RBP12.76□□□□□ -0.37
SRGAP3-204ENST00000470951 TBC1D10CQ8IV04 446 aa12.76□□□□□ -0.37
SRGAP3-204ENST00000470951 DIS3L2Q8IYB7 885 aaKnown RBP12.76□□□□□ -0.37
SRGAP3-204ENST00000470951 SUGCTQ9HAC7 445 aa12.76□□□□□ -0.37
SRGAP3-204ENST00000470951 AXIN2Q9Y2T1 843 aa12.76□□□□□ -0.37
SRGAP3-204ENST00000470951 TNS3Q68CZ2 1445 aa12.76□□□□□ -0.37
SRGAP3-204ENST00000470951 MYH6P13533 1939 aa12.76□□□□□ -0.37
SRGAP3-204ENST00000470951 PKD1L3Q7Z443 1732 aa12.76□□□□□ -0.37
SRGAP3-204ENST00000470951 LRRIQ3A6PVS8 624 aaPredicted RBP12.76□□□□□ -0.37
SRGAP3-204ENST00000470951 MARCH6O60337 910 aa12.76□□□□□ -0.37
SRGAP3-204ENST00000470951 RNF40O75150 1001 aa12.76□□□□□ -0.37
SRGAP3-204ENST00000470951 ADD2P35612 726 aa12.76□□□□□ -0.37
SRGAP3-204ENST00000470951 ARHGAP25P42331 645 aa12.76□□□□□ -0.37
SRGAP3-204ENST00000470951 ZAP70P43403 619 aa12.76□□□□□ -0.37
SRGAP3-204ENST00000470951 RCAN1P53805 252 aa12.76□□□□□ -0.37
SRGAP3-204ENST00000470951 USP14P54578 494 aa12.76□□□□□ -0.37
SRGAP3-204ENST00000470951 ALX1Q15699 326 aa12.76□□□□□ -0.37
SRGAP3-204ENST00000470951 CCDC57Q2TAC2 916 aa12.76□□□□□ -0.37
SRGAP3-204ENST00000470951 SPECC1Q5M775 1068 aa12.76□□□□□ -0.37
SRGAP3-204ENST00000470951 ZNF512BQ96KM6 892 aaPredicted RBP12.76□□□□□ -0.37
SRGAP3-204ENST00000470951 SLC26A6Q9BXS9 759 aa12.76□□□□□ -0.37
SRGAP3-204ENST00000470951 BCL9LQ86UU0 1499 aa12.75□□□□□ -0.37
SRGAP3-204ENST00000470951 BTBD18B2RXH4 712 aa12.75□□□□□ -0.37
SRGAP3-204ENST00000470951 PRPF6O94906 941 aaKnown RBP12.75□□□□□ -0.37
SRGAP3-204ENST00000470951 SF3B2Q13435 895 aaKnown RBP12.75□□□□□ -0.37
SRGAP3-204ENST00000470951 UBE3CQ15386 1083 aa12.75□□□□□ -0.37
SRGAP3-204ENST00000470951 TMEM67Q5HYA8 995 aa12.75□□□□□ -0.37
SRGAP3-204ENST00000470951 SH3RF1Q7Z6J0 888 aa12.75□□□□□ -0.37
SRGAP3-204ENST00000470951 ANKRD20A12PQ8NF67 263 aa12.75□□□□□ -0.37
SRGAP3-204ENST00000470951 CPLX3Q8WVH0 158 aa12.75□□□□□ -0.37
SRGAP3-204ENST00000470951 ZNF594Q96JF6 807 aaPredicted RBP12.75□□□□□ -0.37
SRGAP3-204ENST00000470951 CDC5LQ99459 802 aaKnown RBP12.75□□□□□ -0.37
SRGAP3-204ENST00000470951 MTA3Q9BTC8 594 aa12.75□□□□□ -0.37
SRGAP3-204ENST00000470951 STRN4Q9NRL3 753 aa12.75□□□□□ -0.37
SRGAP3-204ENST00000470951 ABHD10Q9NUJ1 306 aa12.75□□□□□ -0.37
SRGAP3-204ENST00000470951 LIMA1Q9UHB6 759 aaKnown RBP12.75□□□□□ -0.37
SRGAP3-204ENST00000470951 SLC12A7Q9Y666 1083 aa12.75□□□□□ -0.37
SRGAP3-204ENST00000470951 A0A087WUV0 522 aaPredicted RBP12.74□□□□□ -0.37
SRGAP3-204ENST00000470951 PSMD14O00487 310 aa12.74□□□□□ -0.37
SRGAP3-204ENST00000470951 BMP15O95972 392 aa12.74□□□□□ -0.37
SRGAP3-204ENST00000470951 FOXR1Q6PIV2 292 aa12.74□□□□□ -0.37
SRGAP3-204ENST00000470951 TRAPPC11Q7Z392 1133 aa12.74□□□□□ -0.37
SRGAP3-204ENST00000470951 TACO1Q9BSH4 297 aaKnown RBP12.74□□□□□ -0.37
SRGAP3-204ENST00000470951 PUS3Q9BZE2 481 aaKnown RBP12.74□□□□□ -0.37
SRGAP3-204ENST00000470951 CNNM2Q9H8M5 875 aa12.74□□□□□ -0.37
SRGAP3-204ENST00000470951 ALS2Q96Q42 1657 aa12.74□□□□□ -0.37
SRGAP3-204ENST00000470951 B4E1Z4 1266 aa12.74□□□□□ -0.37
SRGAP3-204ENST00000470951 SHOX2O60902 331 aaPredicted RBP12.74□□□□□ -0.37
SRGAP3-204ENST00000470951 DEXIO95424 95 aa12.74□□□□□ -0.37
SRGAP3-204ENST00000470951 SYF2O95926 243 aaKnown RBP12.74□□□□□ -0.37
SRGAP3-204ENST00000470951 RXRAP19793 462 aa12.74□□□□□ -0.37
SRGAP3-204ENST00000470951 ARID4AP29374 1257 aaPredicted RBP12.74□□□□□ -0.37
SRGAP3-204ENST00000470951 ADORA1P30542 326 aa12.74□□□□□ -0.37
SRGAP3-204ENST00000470951 FXR1P51114 621 aaKnown RBP eCLIP12.74□□□□□ -0.37
SRGAP3-204ENST00000470951 GRIN1Q05586 938 aa12.74□□□□□ -0.37
SRGAP3-204ENST00000470951 CKAP4Q07065 602 aaKnown RBP12.74□□□□□ -0.37
SRGAP3-204ENST00000470951 NBPF14Q5TI25 921 aa12.74□□□□□ -0.37
SRGAP3-204ENST00000470951 WWC2Q6AWC2 1192 aa12.74□□□□□ -0.37
SRGAP3-204ENST00000470951 ZNF662Q6ZS27 426 aa12.74□□□□□ -0.37
SRGAP3-204ENST00000470951 NOA1Q8NC60 698 aaKnown RBP12.74□□□□□ -0.37
SRGAP3-204ENST00000470951 HAUS4Q9H6D7 363 aa12.74□□□□□ -0.37
SRGAP3-204ENST00000470951 TIAM2Q8IVF5 1701 aa12.74□□□□□ -0.37
SRGAP3-204ENST00000470951 A0A0U1RQJ8 604 aa12.73□□□□□ -0.37
SRGAP3-204ENST00000470951 NUTM2BA6NNL0 878 aaPredicted RBP12.73□□□□□ -0.37
SRGAP3-204ENST00000470951 NUTM2EB1AL46 878 aaPredicted RBP12.73□□□□□ -0.37
SRGAP3-204ENST00000470951 INHBEP58166 350 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms