RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 A0A0D9SFI3 127 aa18.7■□□□□ 0.58
HDAC6-218ENST00000470942 POTEFA5A3E0 1075 aa18.7■□□□□ 0.58
HDAC6-218ENST00000470942 RAD21O60216 631 aa18.7■□□□□ 0.58
HDAC6-218ENST00000470942 ADCY3O60266 1144 aa18.7■□□□□ 0.58
HDAC6-218ENST00000470942 PDE4BQ07343 736 aa18.7■□□□□ 0.58
HDAC6-218ENST00000470942 PPARAQ07869 468 aa18.7■□□□□ 0.58
HDAC6-218ENST00000470942 Q3C1V9 767 aa18.7■□□□□ 0.58
HDAC6-218ENST00000470942 KIAA1755Q5JYT7 1200 aa18.7■□□□□ 0.58
HDAC6-218ENST00000470942 SPICE1Q8N0Z3 855 aa18.7■□□□□ 0.58
HDAC6-218ENST00000470942 VCPKMTQ9H867 229 aa18.7■□□□□ 0.58
HDAC6-218ENST00000470942 CWC22Q9HCG8 908 aaKnown RBP18.7■□□□□ 0.58
HDAC6-218ENST00000470942 RBBP6Q7Z6E9 1792 aaKnown RBP18.7■□□□□ 0.58
HDAC6-218ENST00000470942 CENPFP49454 3210 aa18.7■□□□□ 0.58
HDAC6-218ENST00000470942 GREB1LQ9C091 1923 aaPredicted RBP18.69■□□□□ 0.58
HDAC6-218ENST00000470942 MYH4Q9Y623 1939 aa18.69■□□□□ 0.58
HDAC6-218ENST00000470942 VPS53Q5VIR6 699 aa18.69■□□□□ 0.58
HDAC6-218ENST00000470942 SLAIN1Q8ND83 568 aa18.69■□□□□ 0.58
HDAC6-218ENST00000470942 LPAR1Q92633 364 aa18.69■□□□□ 0.58
HDAC6-218ENST00000470942 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.69■□□□□ 0.58
HDAC6-218ENST00000470942 RABGAP1Q9Y3P9 1069 aa18.69■□□□□ 0.58
HDAC6-218ENST00000470942 SPDYE16A6NNV3 312 aaPredicted RBP18.68■□□□□ 0.58
HDAC6-218ENST00000470942 ELNP15502 786 aa18.68■□□□□ 0.58
HDAC6-218ENST00000470942 SDSP20132 328 aa18.68■□□□□ 0.58
HDAC6-218ENST00000470942 MAPK4P31152 587 aa18.68■□□□□ 0.58
HDAC6-218ENST00000470942 UBXN2AP68543 259 aa18.68■□□□□ 0.58
HDAC6-218ENST00000470942 IRF5Q13568 498 aa18.68■□□□□ 0.58
HDAC6-218ENST00000470942 COG2Q14746 738 aa18.68■□□□□ 0.58
HDAC6-218ENST00000470942 POTEEQ6S8J3 1075 aa18.68■□□□□ 0.58
HDAC6-218ENST00000470942 SAMD1Q6SPF0 538 aaPredicted RBP18.68■□□□□ 0.58
HDAC6-218ENST00000470942 GOPCQ9HD26 462 aa18.68■□□□□ 0.58
HDAC6-218ENST00000470942 HOXC10Q9NYD6 342 aa18.68■□□□□ 0.58
HDAC6-218ENST00000470942 FOXP2O15409 715 aa18.67■□□□□ 0.58
HDAC6-218ENST00000470942 CNMDO75829 334 aa18.67■□□□□ 0.58
HDAC6-218ENST00000470942 TSPY3P0CV98 308 aa18.67■□□□□ 0.58
HDAC6-218ENST00000470942 TSPY8P0CW00 308 aa18.67■□□□□ 0.58
HDAC6-218ENST00000470942 EN2P19622 333 aaPredicted RBP18.67■□□□□ 0.58
HDAC6-218ENST00000470942 PDE4AP27815 886 aa18.67■□□□□ 0.58
HDAC6-218ENST00000470942 CCNA1P78396 465 aa18.67■□□□□ 0.58
HDAC6-218ENST00000470942 CTDSPL2Q05D32 466 aa18.67■□□□□ 0.58
HDAC6-218ENST00000470942 MTFR1Q15390 333 aa18.67■□□□□ 0.58
HDAC6-218ENST00000470942 PORCNQ9H237 461 aa18.67■□□□□ 0.58
HDAC6-218ENST00000470942 TNRC18O15417 2968 aaPredicted RBP18.67■□□□□ 0.58
HDAC6-218ENST00000470942 PLXNB2O15031 1838 aa18.67■□□□□ 0.58
HDAC6-218ENST00000470942 WDR46O15213 610 aaKnown RBP18.66■□□□□ 0.58
HDAC6-218ENST00000470942 FLOT1O75955 427 aa18.66■□□□□ 0.58
HDAC6-218ENST00000470942 ALX1Q15699 326 aa18.66■□□□□ 0.58
HDAC6-218ENST00000470942 FAM47AQ5JRC9 791 aa18.66■□□□□ 0.58
HDAC6-218ENST00000470942 WDR78Q5VTH9 848 aa18.66■□□□□ 0.58
HDAC6-218ENST00000470942 LBX2Q6XYB7 198 aa18.66■□□□□ 0.58
HDAC6-218ENST00000470942 ZNF589Q86UQ0 364 aaPredicted RBP18.66■□□□□ 0.58
HDAC6-218ENST00000470942 PXYLP1Q8TE99 480 aa18.66■□□□□ 0.58
HDAC6-218ENST00000470942 DIAPH3Q9NSV4 1193 aa18.66■□□□□ 0.58
HDAC6-218ENST00000470942 BTBD7Q9P203 1132 aa18.66■□□□□ 0.58
HDAC6-218ENST00000470942 NYAP2Q9P242 653 aa18.66■□□□□ 0.58
HDAC6-218ENST00000470942 CLIP2Q9UDT6 1046 aa18.66■□□□□ 0.58
HDAC6-218ENST00000470942 GJD2Q9UKL4 321 aa18.66■□□□□ 0.58
HDAC6-218ENST00000470942 CCDC171Q6TFL3 1326 aa18.66■□□□□ 0.58
HDAC6-218ENST00000470942 RLFQ13129 1914 aa18.66■□□□□ 0.58
HDAC6-218ENST00000470942 HSPD1P10809 573 aaKnown RBP18.65■□□□□ 0.58
HDAC6-218ENST00000470942 DSG3P32926 999 aa18.65■□□□□ 0.58
HDAC6-218ENST00000470942 MFAP1P55081 439 aaKnown RBP18.65■□□□□ 0.58
HDAC6-218ENST00000470942 TFAP4Q01664 338 aa18.65■□□□□ 0.58
HDAC6-218ENST00000470942 CWC27Q6UX04 472 aaKnown RBP18.65■□□□□ 0.58
HDAC6-218ENST00000470942 PLEKHH3Q7Z736 793 aa18.65■□□□□ 0.58
HDAC6-218ENST00000470942 NUDT12Q9BQG2 462 aa18.65■□□□□ 0.58
HDAC6-218ENST00000470942 PARP14Q460N5 1801 aa18.65■□□□□ 0.58
HDAC6-218ENST00000470942 IGKV6D-41A0A0C4DH26 115 aa18.64■□□□□ 0.57
HDAC6-218ENST00000470942 HIP1O00291 1037 aa18.64■□□□□ 0.57
HDAC6-218ENST00000470942 FGAP02671 866 aa18.64■□□□□ 0.57
HDAC6-218ENST00000470942 INHAP05111 366 aa18.64■□□□□ 0.57
HDAC6-218ENST00000470942 CCL5P13501 91 aa18.64■□□□□ 0.57
HDAC6-218ENST00000470942 CYP2B6P20813 491 aa18.64■□□□□ 0.57
HDAC6-218ENST00000470942 GPR142Q7Z601 462 aa18.64■□□□□ 0.57
HDAC6-218ENST00000470942 NEDD1Q8NHV4 660 aa18.64■□□□□ 0.57
HDAC6-218ENST00000470942 CEP95Q96GE4 821 aa18.64■□□□□ 0.57
HDAC6-218ENST00000470942 RNF208Q9H0X6 261 aa18.64■□□□□ 0.57
HDAC6-218ENST00000470942 INCENPQ9NQS7 918 aa18.64■□□□□ 0.57
HDAC6-218ENST00000470942 PLS1Q14651 629 aa18.63■□□□□ 0.57
HDAC6-218ENST00000470942 FAM83BQ5T0W9 1011 aa18.63■□□□□ 0.57
HDAC6-218ENST00000470942 TTC22Q5TAA0 569 aa18.63■□□□□ 0.57
HDAC6-218ENST00000470942 SOCS4Q8WXH5 440 aa18.63■□□□□ 0.57
HDAC6-218ENST00000470942 ATG4CQ96DT6 458 aa18.63■□□□□ 0.57
HDAC6-218ENST00000470942 TOMM22Q9NS69 142 aa18.63■□□□□ 0.57
HDAC6-218ENST00000470942 MTMR4Q9NYA4 1195 aa18.63■□□□□ 0.57
HDAC6-218ENST00000470942 ANAPC4Q9UJX5 808 aa18.63■□□□□ 0.57
HDAC6-218ENST00000470942 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.63■□□□□ 0.57
HDAC6-218ENST00000470942 COL11A1P12107 1806 aaPredicted RBP18.63■□□□□ 0.57
HDAC6-218ENST00000470942 TSPY2A6NKD2 308 aa18.62■□□□□ 0.57
HDAC6-218ENST00000470942 F5H6K3 240 aa18.62■□□□□ 0.57
HDAC6-218ENST00000470942 RANBP6O60518 1105 aaKnown RBP18.62■□□□□ 0.57
HDAC6-218ENST00000470942 TTLL1O95922 423 aa18.62■□□□□ 0.57
HDAC6-218ENST00000470942 KLRC3Q07444 240 aa18.62■□□□□ 0.57
HDAC6-218ENST00000470942 MB21D1Q8N884 522 aa18.62■□□□□ 0.57
HDAC6-218ENST00000470942 UNC93B1Q9H1C4 597 aa18.62■□□□□ 0.57
HDAC6-218ENST00000470942 IVNS1ABPQ9Y6Y0 642 aa18.62■□□□□ 0.57
HDAC6-218ENST00000470942 A0A0G2JMZ2 1700 aa18.61■□□□□ 0.57
HDAC6-218ENST00000470942 PLIN4Q96Q06 1357 aa18.61■□□□□ 0.57
HDAC6-218ENST00000470942 RGS2P41220 211 aa18.61■□□□□ 0.57
HDAC6-218ENST00000470942 HAND2P61296 217 aa18.61■□□□□ 0.57
HDAC6-218ENST00000470942 MORN1Q5T089 497 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms