RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 V9GY48 417 aaPredicted RBP9.68□□□□□ -0.86
GTF3A-206ENST00000470606 CCDC196A0A1B0GTZ2 297 aa9.68□□□□□ -0.86
GTF3A-206ENST00000470606 H3BQV1 296 aa9.68□□□□□ -0.86
GTF3A-206ENST00000470606 MPHOSPH10O00566 681 aaKnown RBP9.68□□□□□ -0.86
GTF3A-206ENST00000470606 GADD45BO75293 160 aaPredicted RBP9.68□□□□□ -0.86
GTF3A-206ENST00000470606 CDKL5O76039 1030 aa9.68□□□□□ -0.86
GTF3A-206ENST00000470606 CALM1P0DP23 149 aa9.68□□□□□ -0.86
GTF3A-206ENST00000470606 CALM2P0DP24 149 aa9.68□□□□□ -0.86
GTF3A-206ENST00000470606 CALM3P0DP25 149 aa9.68□□□□□ -0.86
GTF3A-206ENST00000470606 TOP1P11387 765 aaKnown RBP9.68□□□□□ -0.86
GTF3A-206ENST00000470606 MAP3K10Q02779 954 aa9.68□□□□□ -0.86
GTF3A-206ENST00000470606 PPP2R5BQ15173 497 aa9.68□□□□□ -0.86
GTF3A-206ENST00000470606 NPY5RQ15761 445 aa9.68□□□□□ -0.86
GTF3A-206ENST00000470606 IFFO2Q5TF58 517 aa9.68□□□□□ -0.86
GTF3A-206ENST00000470606 PRAMEF18Q5VWM3 479 aa9.68□□□□□ -0.86
GTF3A-206ENST00000470606 C9orf131Q5VYM1 1079 aa9.68□□□□□ -0.86
GTF3A-206ENST00000470606 DLK2Q6UY11 383 aa9.68□□□□□ -0.86
GTF3A-206ENST00000470606 USP48Q86UV5 1035 aa9.68□□□□□ -0.86
GTF3A-206ENST00000470606 GPT2Q8TD30 523 aa9.68□□□□□ -0.86
GTF3A-206ENST00000470606 TMOD2Q9NZR1 351 aa9.68□□□□□ -0.86
GTF3A-206ENST00000470606 TFIP11Q9UBB9 837 aaKnown RBP9.68□□□□□ -0.86
GTF3A-206ENST00000470606 KCNJ14Q9UNX9 436 aa9.68□□□□□ -0.86
GTF3A-206ENST00000470606 ATAD5Q96QE3 1844 aa9.67□□□□□ -0.86
GTF3A-206ENST00000470606 A0A1W2PRG0 241 aa9.67□□□□□ -0.86
GTF3A-206ENST00000470606 DDX11L8A8MPP1 907 aa9.67□□□□□ -0.86
GTF3A-206ENST00000470606 PRPF3O43395 683 aaKnown RBP9.67□□□□□ -0.86
GTF3A-206ENST00000470606 TTLL1O95922 423 aa9.67□□□□□ -0.86
GTF3A-206ENST00000470606 GH2P01242 217 aa9.67□□□□□ -0.86
GTF3A-206ENST00000470606 SNHG28P0DPA3 235 aa9.67□□□□□ -0.86
GTF3A-206ENST00000470606 PDHBP11177 359 aa9.67□□□□□ -0.86
GTF3A-206ENST00000470606 EEF2P13639 858 aaKnown RBP9.67□□□□□ -0.86
GTF3A-206ENST00000470606 KIF23Q02241 960 aaPredicted RBP9.67□□□□□ -0.86
GTF3A-206ENST00000470606 CCDC178Q5BJE1 867 aa9.67□□□□□ -0.86
GTF3A-206ENST00000470606 CTCFLQ8NI51 663 aaPredicted RBP9.67□□□□□ -0.86
GTF3A-206ENST00000470606 PIBF1Q8WXW3 757 aa9.67□□□□□ -0.86
GTF3A-206ENST00000470606 CCDC17Q96LX7 622 aa9.67□□□□□ -0.86
GTF3A-206ENST00000470606 MAP3K14Q99558 947 aa9.67□□□□□ -0.86
GTF3A-206ENST00000470606 RNF26Q9BY78 433 aaPredicted RBP9.67□□□□□ -0.86
GTF3A-206ENST00000470606 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.67□□□□□ -0.86
GTF3A-206ENST00000470606 RBM28Q9NW13 759 aaKnown RBP9.67□□□□□ -0.86
GTF3A-206ENST00000470606 PHF20L1A8MW92 1017 aa9.66□□□□□ -0.86
GTF3A-206ENST00000470606 FIBPO43427 364 aa9.66□□□□□ -0.86
GTF3A-206ENST00000470606 MYO1BO43795 1136 aa9.66□□□□□ -0.86
GTF3A-206ENST00000470606 TRAK2O60296 914 aa9.66□□□□□ -0.86
GTF3A-206ENST00000470606 DEXIO95424 95 aa9.66□□□□□ -0.86
GTF3A-206ENST00000470606 TYW1BQ6NUM6 668 aa9.66□□□□□ -0.86
GTF3A-206ENST00000470606 CPLX2Q6PUV4 134 aaKnown RBP9.66□□□□□ -0.86
GTF3A-206ENST00000470606 OXER1Q8TDS5 423 aa9.66□□□□□ -0.86
GTF3A-206ENST00000470606 DEFB129Q9H1M3 183 aa9.66□□□□□ -0.86
GTF3A-206ENST00000470606 HERC5Q9UII4 1024 aaKnown RBP9.66□□□□□ -0.86
GTF3A-206ENST00000470606 FZD1Q9UP38 647 aa9.66□□□□□ -0.86
GTF3A-206ENST00000470606 FRMPD2Q68DX3 1309 aaPredicted RBP9.66□□□□□ -0.86
GTF3A-206ENST00000470606 KLRF2D3W0D1 207 aa9.66□□□□□ -0.86
GTF3A-206ENST00000470606 TBC1D12O60347 775 aa9.66□□□□□ -0.86
GTF3A-206ENST00000470606 PDIA4P13667 645 aaKnown RBP9.66□□□□□ -0.86
GTF3A-206ENST00000470606 MMP14P50281 582 aa9.66□□□□□ -0.86
GTF3A-206ENST00000470606 ABCB5Q2M3G0 1257 aa9.66□□□□□ -0.86
GTF3A-206ENST00000470606 NOM1Q5C9Z4 860 aaKnown RBP9.66□□□□□ -0.86
GTF3A-206ENST00000470606 KIAA1755Q5JYT7 1200 aa9.66□□□□□ -0.86
GTF3A-206ENST00000470606 ANGEL2Q5VTE6 544 aaKnown RBP9.66□□□□□ -0.86
GTF3A-206ENST00000470606 CCDC84Q86UT8 332 aaPredicted RBP9.66□□□□□ -0.86
GTF3A-206ENST00000470606 TRIM22Q8IYM9 498 aa9.66□□□□□ -0.86
GTF3A-206ENST00000470606 TMEM87AQ8NBN3 555 aa9.66□□□□□ -0.86
GTF3A-206ENST00000470606 MKL1Q969V6 931 aa9.66□□□□□ -0.86
GTF3A-206ENST00000470606 UBA5Q9GZZ9 404 aa9.66□□□□□ -0.86
GTF3A-206ENST00000470606 VPS54Q9P1Q0 977 aa9.66□□□□□ -0.86
GTF3A-206ENST00000470606 BTBD18B2RXH4 712 aa9.65□□□□□ -0.86
GTF3A-206ENST00000470606 H7C1D1 291 aa9.65□□□□□ -0.86
GTF3A-206ENST00000470606 U2AF2P26368 475 aaKnown RBP eCLIP9.65□□□□□ -0.86
GTF3A-206ENST00000470606 KIF5BP33176 963 aa9.65□□□□□ -0.86
GTF3A-206ENST00000470606 ECE1P42892 770 aa9.65□□□□□ -0.86
GTF3A-206ENST00000470606 ATP2B2Q01814 1243 aa9.65□□□□□ -0.86
GTF3A-206ENST00000470606 NBPF12Q5TAG4 269 aaPredicted RBP9.65□□□□□ -0.86
GTF3A-206ENST00000470606 TTBK2Q6IQ55 1244 aa9.65□□□□□ -0.86
GTF3A-206ENST00000470606 TMEM179Q6ZVK1 233 aa9.65□□□□□ -0.86
GTF3A-206ENST00000470606 ACER1Q8TDN7 264 aa9.65□□□□□ -0.86
GTF3A-206ENST00000470606 USP28Q96RU2 1077 aa9.65□□□□□ -0.86
GTF3A-206ENST00000470606 GLIS2Q9BZE0 524 aaPredicted RBP9.65□□□□□ -0.86
GTF3A-206ENST00000470606 ZSCAN16Q9H4T2 348 aaPredicted RBP9.65□□□□□ -0.86
GTF3A-206ENST00000470606 KANSL2Q9H9L4 492 aa9.65□□□□□ -0.86
GTF3A-206ENST00000470606 NYAP2Q9P242 653 aa9.65□□□□□ -0.86
GTF3A-206ENST00000470606 KIF3AQ9Y496 699 aa9.65□□□□□ -0.86
GTF3A-206ENST00000470606 SSC5DA1L4H1 1573 aa9.65□□□□□ -0.87
GTF3A-206ENST00000470606 FAM205CA6NFA0 338 aa9.64□□□□□ -0.87
GTF3A-206ENST00000470606 MMP1P03956 469 aa9.64□□□□□ -0.87
GTF3A-206ENST00000470606 PARP1P09874 1014 aaKnown RBP9.64□□□□□ -0.87
GTF3A-206ENST00000470606 NCLP19338 710 aaKnown RBP9.64□□□□□ -0.87
GTF3A-206ENST00000470606 ICA1Q05084 483 aa9.64□□□□□ -0.87
GTF3A-206ENST00000470606 NR5A1Q13285 461 aa9.64□□□□□ -0.87
GTF3A-206ENST00000470606 PFKFB3Q16875 520 aaPredicted RBP9.64□□□□□ -0.87
GTF3A-206ENST00000470606 EARS2Q5JPH6 523 aaKnown RBP9.64□□□□□ -0.87
GTF3A-206ENST00000470606 GPKOWQ92917 476 aaPredicted RBP eCLIP9.64□□□□□ -0.87
GTF3A-206ENST00000470606 PHF20Q9BVI0 1012 aa9.64□□□□□ -0.87
GTF3A-206ENST00000470606 GGA3Q9NZ52 723 aa9.64□□□□□ -0.87
GTF3A-206ENST00000470606 SCG2P13521 617 aa9.64□□□□□ -0.87
GTF3A-206ENST00000470606 CAP2P40123 477 aa9.64□□□□□ -0.87
GTF3A-206ENST00000470606 CEBPZQ03701 1054 aaKnown RBP9.64□□□□□ -0.87
GTF3A-206ENST00000470606 ZNF543Q08ER8 600 aa9.64□□□□□ -0.87
GTF3A-206ENST00000470606 KCTD1Q719H9 257 aa9.64□□□□□ -0.87
GTF3A-206ENST00000470606 RGS22Q8NE09 1264 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms