RNA–Protein interactions for RNA: ENST00000470252.1

SFXN3-205, Transcript of sideroflexin 3, humanhuman

TSL 2

Gene SFXN3, Length 2,541 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-205ENST00000470252 FGFR2P21802 821 aa14.91□□□□□ -0.02
SFXN3-205ENST00000470252 EARS2Q5JPH6 523 aaKnown RBP14.91□□□□□ -0.02
SFXN3-205ENST00000470252 GOLGA5Q8TBA6 731 aa14.91□□□□□ -0.02
SFXN3-205ENST00000470252 STAMQ92783 540 aa14.91□□□□□ -0.02
SFXN3-205ENST00000470252 SHISA4Q96DD7 197 aa14.91□□□□□ -0.02
SFXN3-205ENST00000470252 CCDC51Q96ER9 411 aa14.91□□□□□ -0.02
SFXN3-205ENST00000470252 SUGCTQ9HAC7 445 aa14.91□□□□□ -0.02
SFXN3-205ENST00000470252 hCG_1642624A0A1W2PR95 340 aa14.91□□□□□ -0.02
SFXN3-205ENST00000470252 GNAT2P19087 354 aa14.91□□□□□ -0.02
SFXN3-205ENST00000470252 KRT2P35908 639 aa14.91□□□□□ -0.02
SFXN3-205ENST00000470252 NAPGQ99747 312 aaPredicted RBP14.91□□□□□ -0.02
SFXN3-205ENST00000470252 RNF26Q9BY78 433 aaPredicted RBP14.91□□□□□ -0.02
SFXN3-205ENST00000470252 CWC15Q9P013 229 aaKnown RBP14.91□□□□□ -0.02
SFXN3-205ENST00000470252 FEZ2Q9UHY8 353 aaPredicted RBP14.91□□□□□ -0.02
SFXN3-205ENST00000470252 ITIH6Q6UXX5 1313 aa14.9□□□□□ -0.02
SFXN3-205ENST00000470252 MROH5Q6ZUA9 1318 aa14.9□□□□□ -0.02
SFXN3-205ENST00000470252 CTAGE15A4D2H0 777 aa14.9□□□□□ -0.02
SFXN3-205ENST00000470252 N4BP3O15049 544 aa14.9□□□□□ -0.02
SFXN3-205ENST00000470252 PRDM1O75626 825 aa14.9□□□□□ -0.02
SFXN3-205ENST00000470252 EIF3JO75822 258 aaKnown RBP14.9□□□□□ -0.02
SFXN3-205ENST00000470252 CTAGE8P0CG41 777 aa14.9□□□□□ -0.02
SFXN3-205ENST00000470252 ERVK-24P63145 666 aa14.9□□□□□ -0.02
SFXN3-205ENST00000470252 WWC2Q6AWC2 1192 aa14.9□□□□□ -0.02
SFXN3-205ENST00000470252 CTAGE6Q86UF2 777 aa14.9□□□□□ -0.02
SFXN3-205ENST00000470252 TMTC1Q8IUR5 882 aa14.9□□□□□ -0.02
SFXN3-205ENST00000470252 CTAGE4Q8IX94 777 aa14.9□□□□□ -0.02
SFXN3-205ENST00000470252 MIGA1Q8NAN2 632 aa14.9□□□□□ -0.02
SFXN3-205ENST00000470252 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.9□□□□□ -0.02
SFXN3-205ENST00000470252 RCAN1P53805 252 aa14.9□□□□□ -0.02
SFXN3-205ENST00000470252 TUBB4BP68371 445 aa14.9□□□□□ -0.02
SFXN3-205ENST00000470252 SLC20A2Q08357 652 aa14.9□□□□□ -0.02
SFXN3-205ENST00000470252 KRT31Q15323 416 aa14.9□□□□□ -0.02
SFXN3-205ENST00000470252 FERMT2Q96AC1 680 aa14.9□□□□□ -0.02
SFXN3-205ENST00000470252 NUP88Q99567 741 aaPredicted RBP14.9□□□□□ -0.02
SFXN3-205ENST00000470252 RNF41Q9H4P4 317 aaPredicted RBP14.9□□□□□ -0.02
SFXN3-205ENST00000470252 L1RE1Q9UN81 338 aa14.9□□□□□ -0.02
SFXN3-205ENST00000470252 WNT7AO00755 349 aa14.89□□□□□ -0.03
SFXN3-205ENST00000470252 N4BP1O75113 896 aaKnown RBP14.89□□□□□ -0.03
SFXN3-205ENST00000470252 FECHP22830 423 aa14.89□□□□□ -0.03
SFXN3-205ENST00000470252 VSNL1P62760 191 aa14.89□□□□□ -0.03
SFXN3-205ENST00000470252 ZNF174Q15697 407 aa14.89□□□□□ -0.03
SFXN3-205ENST00000470252 MTA3Q9BTC8 594 aa14.89□□□□□ -0.03
SFXN3-205ENST00000470252 PHF20Q9BVI0 1012 aa14.89□□□□□ -0.03
SFXN3-205ENST00000470252 VPS16Q9H269 839 aa14.89□□□□□ -0.03
SFXN3-205ENST00000470252 ABHD10Q9NUJ1 306 aa14.89□□□□□ -0.03
SFXN3-205ENST00000470252 TNKSO95271 1327 aa14.89□□□□□ -0.03
SFXN3-205ENST00000470252 PNPLA7Q6ZV29 1317 aa14.89□□□□□ -0.03
SFXN3-205ENST00000470252 VGLL3A8MV65 326 aa14.89□□□□□ -0.03
SFXN3-205ENST00000470252 MINDY4BA8MYZ0 360 aa14.89□□□□□ -0.03
SFXN3-205ENST00000470252 CDC25AP30304 524 aa14.89□□□□□ -0.03
SFXN3-205ENST00000470252 PPARAQ07869 468 aa14.89□□□□□ -0.03
SFXN3-205ENST00000470252 PKN1Q16512 942 aa14.89□□□□□ -0.03
SFXN3-205ENST00000470252 WHAMMP3Q1A5X7 153 aa14.89□□□□□ -0.03
SFXN3-205ENST00000470252 RRAGBQ5VZM2 374 aa14.89□□□□□ -0.03
SFXN3-205ENST00000470252 BLZF1Q9H2G9 400 aa14.89□□□□□ -0.03
SFXN3-205ENST00000470252 RTL9Q8NET4 1388 aa14.88□□□□□ -0.03
SFXN3-205ENST00000470252 COL5A2P05997 1499 aaPredicted RBP14.88□□□□□ -0.03
SFXN3-205ENST00000470252 DCCP43146 1447 aa14.88□□□□□ -0.03
SFXN3-205ENST00000470252 ACTN2P35609 894 aa14.88□□□□□ -0.03
SFXN3-205ENST00000470252 CYP26C1Q6V0L0 522 aa14.88□□□□□ -0.03
SFXN3-205ENST00000470252 TAB2Q9NYJ8 693 aa14.88□□□□□ -0.03
SFXN3-205ENST00000470252 RNF225M0QZC1 329 aaPredicted RBP14.88□□□□□ -0.03
SFXN3-205ENST00000470252 ARHGAP25P42331 645 aa14.88□□□□□ -0.03
SFXN3-205ENST00000470252 SEC23AQ15436 765 aa14.88□□□□□ -0.03
SFXN3-205ENST00000470252 NOM1Q5C9Z4 860 aaKnown RBP14.88□□□□□ -0.03
SFXN3-205ENST00000470252 LEKR1Q6ZMV7 388 aa14.88□□□□□ -0.03
SFXN3-205ENST00000470252 PIGBQ92521 554 aa14.88□□□□□ -0.03
SFXN3-205ENST00000470252 SLF1Q9BQI6 1058 aa14.88□□□□□ -0.03
SFXN3-205ENST00000470252 LIMA1Q9UHB6 759 aaKnown RBP14.88□□□□□ -0.03
SFXN3-205ENST00000470252 FAN1Q9Y2M0 1017 aa14.88□□□□□ -0.03
SFXN3-205ENST00000470252 BAZ2BQ9UIF8 2168 aaKnown RBP14.87□□□□□ -0.03
SFXN3-205ENST00000470252 BMP15O95972 392 aa14.87□□□□□ -0.03
SFXN3-205ENST00000470252 COPB1P53618 953 aaKnown RBP14.87□□□□□ -0.03
SFXN3-205ENST00000470252 CASP8Q14790 479 aa14.87□□□□□ -0.03
SFXN3-205ENST00000470252 GBP3Q9H0R5 595 aa14.87□□□□□ -0.03
SFXN3-205ENST00000470252 V9GY48 417 aaPredicted RBP14.87□□□□□ -0.03
SFXN3-205ENST00000470252 BAZ2AQ9UIF9 1905 aaKnown RBP14.87□□□□□ -0.03
SFXN3-205ENST00000470252 XDHP47989 1333 aa14.87□□□□□ -0.03
SFXN3-205ENST00000470252 TTC38Q5R3I4 469 aa14.87□□□□□ -0.03
SFXN3-205ENST00000470252 NCAPH2Q6IBW4 605 aa14.87□□□□□ -0.03
SFXN3-205ENST00000470252 NOA1Q8NC60 698 aaKnown RBP14.87□□□□□ -0.03
SFXN3-205ENST00000470252 SDR42E1Q8WUS8 393 aa14.87□□□□□ -0.03
SFXN3-205ENST00000470252 ESR2Q92731 530 aa14.87□□□□□ -0.03
SFXN3-205ENST00000470252 CCDC102AQ96A19 550 aa14.87□□□□□ -0.03
SFXN3-205ENST00000470252 CARD10Q9BWT7 1032 aa14.87□□□□□ -0.03
SFXN3-205ENST00000470252 TRIM34Q9BYJ4 488 aa14.87□□□□□ -0.03
SFXN3-205ENST00000470252 LRP2BPQ9P2M1 347 aa14.87□□□□□ -0.03
SFXN3-205ENST00000470252 MYO1AQ9UBC5 1043 aa14.87□□□□□ -0.03
SFXN3-205ENST00000470252 LCMT1Q9UIC8 334 aa14.87□□□□□ -0.03
SFXN3-205ENST00000470252 MYO6Q9UM54 1294 aa14.87□□□□□ -0.03
SFXN3-205ENST00000470252 LRP5O75197 1615 aa14.87□□□□□ -0.03
SFXN3-205ENST00000470252 PLCH1Q4KWH8 1693 aa14.86□□□□□ -0.03
SFXN3-205ENST00000470252 ROBO1Q9Y6N7 1651 aa14.86□□□□□ -0.03
SFXN3-205ENST00000470252 ITGB4P16144 1822 aa14.86□□□□□ -0.03
SFXN3-205ENST00000470252 BCL9LQ86UU0 1499 aa14.86□□□□□ -0.03
SFXN3-205ENST00000470252 PLEKHA8P1O95397 391 aa14.86□□□□□ -0.03
SFXN3-205ENST00000470252 BCAMP50895 628 aa14.86□□□□□ -0.03
SFXN3-205ENST00000470252 PTGDRQ13258 359 aa14.86□□□□□ -0.03
SFXN3-205ENST00000470252 PPP2R5BQ15173 497 aa14.86□□□□□ -0.03
SFXN3-205ENST00000470252 MSL3Q8N5Y2 521 aaKnown RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms