RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 SYNPO2Q9UMS6 1093 aa13.18□□□□□ -0.3
SREBF1-209ENST00000470247 CSADQ9Y600 493 aa13.18□□□□□ -0.3
SREBF1-209ENST00000470247 SLC12A7Q9Y666 1083 aa13.18□□□□□ -0.3
SREBF1-209ENST00000470247 OTOFQ9HC10 1997 aa13.18□□□□□ -0.3
SREBF1-209ENST00000470247 DOCK1Q14185 1865 aa13.17□□□□□ -0.3
SREBF1-209ENST00000470247 TRPM7Q96QT4 1865 aa13.17□□□□□ -0.3
SREBF1-209ENST00000470247 F5H6K3 240 aa13.17□□□□□ -0.3
SREBF1-209ENST00000470247 K7ELQ4 463 aaPredicted RBP13.17□□□□□ -0.3
SREBF1-209ENST00000470247 DDAH1O94760 285 aa13.17□□□□□ -0.3
SREBF1-209ENST00000470247 PDHBP11177 359 aa13.17□□□□□ -0.3
SREBF1-209ENST00000470247 CDC27P30260 824 aa13.17□□□□□ -0.3
SREBF1-209ENST00000470247 RCAN1P53805 252 aa13.17□□□□□ -0.3
SREBF1-209ENST00000470247 PPATQ06203 517 aa13.17□□□□□ -0.3
SREBF1-209ENST00000470247 KLRC3Q07444 240 aa13.17□□□□□ -0.3
SREBF1-209ENST00000470247 SCRN1Q12765 414 aa13.17□□□□□ -0.3
SREBF1-209ENST00000470247 NFXL1Q6ZNB6 911 aa13.17□□□□□ -0.3
SREBF1-209ENST00000470247 NECAB1Q8N987 351 aa13.17□□□□□ -0.3
SREBF1-209ENST00000470247 ZNF280CQ8ND82 737 aa13.17□□□□□ -0.3
SREBF1-209ENST00000470247 GMCL1P1Q8NEA9 526 aa13.17□□□□□ -0.3
SREBF1-209ENST00000470247 ZSCAN31Q96LW9 406 aaPredicted RBP13.17□□□□□ -0.3
SREBF1-209ENST00000470247 KIAA1683Q9H0B3 1180 aa13.17□□□□□ -0.3
SREBF1-209ENST00000470247 VCPKMTQ9H867 229 aa13.17□□□□□ -0.3
SREBF1-209ENST00000470247 ATAD5Q96QE3 1844 aa13.17□□□□□ -0.3
SREBF1-209ENST00000470247 NID2Q14112 1375 aa13.17□□□□□ -0.3
SREBF1-209ENST00000470247 PHIPQ8WWQ0 1821 aa13.16□□□□□ -0.3
SREBF1-209ENST00000470247 IRF6O14896 467 aa13.16□□□□□ -0.3
SREBF1-209ENST00000470247 ZBTB43O43298 467 aa13.16□□□□□ -0.3
SREBF1-209ENST00000470247 NDUFB10O96000 172 aa13.16□□□□□ -0.3
SREBF1-209ENST00000470247 BACE1P56817 501 aa13.16□□□□□ -0.3
SREBF1-209ENST00000470247 DGKZQ13574 1117 aa13.16□□□□□ -0.3
SREBF1-209ENST00000470247 CUL4AQ13619 759 aa13.16□□□□□ -0.3
SREBF1-209ENST00000470247 GRM4Q14833 912 aa13.16□□□□□ -0.3
SREBF1-209ENST00000470247 NTRK3Q16288 839 aa13.16□□□□□ -0.3
SREBF1-209ENST00000470247 SLC35G1Q2M3R5 365 aa13.16□□□□□ -0.3
SREBF1-209ENST00000470247 CATIPQ7Z7H3 387 aa13.16□□□□□ -0.3
SREBF1-209ENST00000470247 SAPCD2Q86UD0 394 aa13.16□□□□□ -0.3
SREBF1-209ENST00000470247 MICU3Q86XE3 530 aa13.16□□□□□ -0.3
SREBF1-209ENST00000470247 STAG2Q8N3U4 1231 aa13.16□□□□□ -0.3
SREBF1-209ENST00000470247 FANCBQ8NB91 859 aa13.16□□□□□ -0.3
SREBF1-209ENST00000470247 SLC10A4Q96EP9 437 aa13.16□□□□□ -0.3
SREBF1-209ENST00000470247 MAP3K14Q99558 947 aa13.16□□□□□ -0.3
SREBF1-209ENST00000470247 NCOA5Q9HCD5 579 aaKnown RBP13.16□□□□□ -0.3
SREBF1-209ENST00000470247 ARHGEF10LQ9HCE6 1279 aa13.16□□□□□ -0.3
SREBF1-209ENST00000470247 EMILIN3Q9NT22 766 aa13.16□□□□□ -0.3
SREBF1-209ENST00000470247 MAD2L2Q9UI95 211 aa13.16□□□□□ -0.3
SREBF1-209ENST00000470247 KCNH4Q9UQ05 1017 aa13.16□□□□□ -0.3
SREBF1-209ENST00000470247 TLL2Q9Y6L7 1015 aa13.16□□□□□ -0.3
SREBF1-209ENST00000470247 PALM3A6NDB9 673 aaPredicted RBP13.15□□□□□ -0.3
SREBF1-209ENST00000470247 GOLGA8BA8MQT2 603 aa13.15□□□□□ -0.3
SREBF1-209ENST00000470247 USP17L10C9JJH3 530 aa13.15□□□□□ -0.3
SREBF1-209ENST00000470247 CTDNEP1O95476 244 aa13.15□□□□□ -0.3
SREBF1-209ENST00000470247 ADD1P35611 737 aaKnown RBP13.15□□□□□ -0.3
SREBF1-209ENST00000470247 HUNKP57058 714 aa13.15□□□□□ -0.3
SREBF1-209ENST00000470247 CCT2P78371 535 aaKnown RBP13.15□□□□□ -0.3
SREBF1-209ENST00000470247 FUT2Q10981 343 aa13.15□□□□□ -0.3
SREBF1-209ENST00000470247 STK3Q13188 491 aa13.15□□□□□ -0.3
SREBF1-209ENST00000470247 PPIL2Q13356 520 aa13.15□□□□□ -0.3
SREBF1-209ENST00000470247 SH3D19Q5HYK7 790 aa13.15□□□□□ -0.3
SREBF1-209ENST00000470247 SLFN13Q68D06 897 aa13.15□□□□□ -0.3
SREBF1-209ENST00000470247 USP17L2Q6R6M4 530 aa13.15□□□□□ -0.3
SREBF1-209ENST00000470247 CCDC144CPQ8IYA2 1237 aa13.15□□□□□ -0.3
SREBF1-209ENST00000470247 NUP133Q8WUM0 1156 aa13.15□□□□□ -0.3
SREBF1-209ENST00000470247 GTF3C6Q969F1 213 aa13.15□□□□□ -0.3
SREBF1-209ENST00000470247 OPTNQ96CV9 577 aa13.15□□□□□ -0.3
SREBF1-209ENST00000470247 WNK4Q96J92 1243 aa13.15□□□□□ -0.3
SREBF1-209ENST00000470247 SLKQ9H2G2 1235 aaPredicted RBP13.15□□□□□ -0.3
SREBF1-209ENST00000470247 AS3MTQ9HBK9 375 aa13.15□□□□□ -0.3
SREBF1-209ENST00000470247 SH2B1Q9NRF2 756 aaPredicted RBP13.15□□□□□ -0.3
SREBF1-209ENST00000470247 MYH4Q9Y623 1939 aa13.14□□□□□ -0.31
SREBF1-209ENST00000470247 TRIM75PA6NK02 468 aa13.14□□□□□ -0.31
SREBF1-209ENST00000470247 GOLGA8AA7E2F4 631 aa13.14□□□□□ -0.31
SREBF1-209ENST00000470247 C19orf81C9J6K1 198 aa13.14□□□□□ -0.31
SREBF1-209ENST00000470247 CXCL11O14625 94 aa13.14□□□□□ -0.31
SREBF1-209ENST00000470247 DTNBO60941 627 aa13.14□□□□□ -0.31
SREBF1-209ENST00000470247 ANP32AP39687 249 aaKnown RBP13.14□□□□□ -0.31
SREBF1-209ENST00000470247 METAP2P50579 478 aaKnown RBP eCLIP13.14□□□□□ -0.31
SREBF1-209ENST00000470247 ZNF543Q08ER8 600 aa13.14□□□□□ -0.31
SREBF1-209ENST00000470247 MTMR2Q13614 643 aa13.14□□□□□ -0.31
SREBF1-209ENST00000470247 MOGSQ13724 837 aa13.14□□□□□ -0.31
SREBF1-209ENST00000470247 SYNE3Q6ZMZ3 975 aa13.14□□□□□ -0.31
SREBF1-209ENST00000470247 NBPF11Q86T75 865 aa13.14□□□□□ -0.31
SREBF1-209ENST00000470247 HSCBQ8IWL3 235 aa13.14□□□□□ -0.31
SREBF1-209ENST00000470247 CHMP4CQ96CF2 233 aa13.14□□□□□ -0.31
SREBF1-209ENST00000470247 OTUD5Q96G74 571 aa13.14□□□□□ -0.31
SREBF1-209ENST00000470247 GMCL1Q96IK5 515 aa13.14□□□□□ -0.31
SREBF1-209ENST00000470247 MS4A4AQ96JQ5 239 aa13.14□□□□□ -0.31
SREBF1-209ENST00000470247 C12orf42Q96LP6 360 aa13.14□□□□□ -0.31
SREBF1-209ENST00000470247 NUP88Q99567 741 aaPredicted RBP13.14□□□□□ -0.31
SREBF1-209ENST00000470247 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.14□□□□□ -0.31
SREBF1-209ENST00000470247 NAP1L2Q9ULW6 460 aaPredicted RBP13.14□□□□□ -0.31
SREBF1-209ENST00000470247 MTMR7Q9Y216 660 aa13.14□□□□□ -0.31
SREBF1-209ENST00000470247 TMEM88BA6NKF7 163 aa13.13□□□□□ -0.31
SREBF1-209ENST00000470247 PLEKHA8P1O95397 391 aa13.13□□□□□ -0.31
SREBF1-209ENST00000470247 GOLGA8HP0CJ92 632 aa13.13□□□□□ -0.31
SREBF1-209ENST00000470247 CALM1P0DP23 149 aa13.13□□□□□ -0.31
SREBF1-209ENST00000470247 CALM2P0DP24 149 aa13.13□□□□□ -0.31
SREBF1-209ENST00000470247 CALM3P0DP25 149 aa13.13□□□□□ -0.31
SREBF1-209ENST00000470247 SLC4A3P48751 1232 aa13.13□□□□□ -0.31
SREBF1-209ENST00000470247 HMGCS2P54868 508 aa13.13□□□□□ -0.31
SREBF1-209ENST00000470247 PPP2R5BQ15173 497 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms