RNA–Protein interactions for RNA: ENST00000469882.5

FXR1-208, Transcript of FMR1 autosomal homolog 1, human

TSL 3

Gene FXR1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-208	ENST00000469882	LBX2	Q6XYB7	198 aa		13.49	□□□□□ -0.25
FXR1-208	ENST00000469882	GPR142	Q7Z601	462 aa		13.49	□□□□□ -0.25
FXR1-208	ENST00000469882	SPICE1	Q8N0Z3	855 aa		13.49	□□□□□ -0.25
FXR1-208	ENST00000469882	TANGO6	Q9C0B7	1094 aa		13.49	□□□□□ -0.25
FXR1-208	ENST00000469882	ARHGEF10L	Q9HCE6	1279 aa		13.49	□□□□□ -0.25
FXR1-208	ENST00000469882	ZBTB47	Q9UFB7	747 aa	Predicted RBP	13.49	□□□□□ -0.25
FXR1-208	ENST00000469882	TMX2	Q9Y320	296 aa		13.49	□□□□□ -0.25
FXR1-208	ENST00000469882	HMGCR	P04035	888 aa		13.48	□□□□□ -0.25
FXR1-208	ENST00000469882	EEF2	P13639	858 aa	Known RBP	13.48	□□□□□ -0.25
FXR1-208	ENST00000469882	CYP2B6	P20813	491 aa		13.48	□□□□□ -0.25
FXR1-208	ENST00000469882	RASA1	P20936	1047 aa		13.48	□□□□□ -0.25
FXR1-208	ENST00000469882	MORN1	Q5T089	497 aa		13.48	□□□□□ -0.25
FXR1-208	ENST00000469882	CCDC129	Q6ZRS4	1044 aa		13.48	□□□□□ -0.25
FXR1-208	ENST00000469882	PLEKHH3	Q7Z736	793 aa		13.48	□□□□□ -0.25
FXR1-208	ENST00000469882	SMC5	Q8IY18	1101 aa		13.48	□□□□□ -0.25
FXR1-208	ENST00000469882	U2AF1L4	Q8WU68	220 aa	Known RBP	13.48	□□□□□ -0.25
FXR1-208	ENST00000469882	SOCS4	Q8WXH5	440 aa		13.48	□□□□□ -0.25
FXR1-208	ENST00000469882	TRIB2	Q92519	343 aa		13.48	□□□□□ -0.25
FXR1-208	ENST00000469882	USP6NL	Q92738	828 aa		13.48	□□□□□ -0.25
FXR1-208	ENST00000469882	LNPK	Q9C0E8	428 aa		13.48	□□□□□ -0.25
FXR1-208	ENST00000469882	SH2D4A	Q9H788	454 aa		13.48	□□□□□ -0.25
FXR1-208	ENST00000469882	VCPKMT	Q9H867	229 aa		13.48	□□□□□ -0.25
FXR1-208	ENST00000469882	PAK6	Q9NQU5	681 aa	Predicted RBP	13.48	□□□□□ -0.25
FXR1-208	ENST00000469882	PATL2	C9JE40	543 aa	Known RBP	13.47	□□□□□ -0.25
FXR1-208	ENST00000469882	FOXP2	O15409	715 aa		13.47	□□□□□ -0.25
FXR1-208	ENST00000469882	IGHD	P01880	384 aa		13.47	□□□□□ -0.25
FXR1-208	ENST00000469882	APP	P05067	770 aa		13.47	□□□□□ -0.25
FXR1-208	ENST00000469882	ATP2B2	Q01814	1243 aa		13.47	□□□□□ -0.25
FXR1-208	ENST00000469882	UBE2Q1	Q7Z7E8	422 aa		13.47	□□□□□ -0.25
FXR1-208	ENST00000469882	IFNL3	Q8IZI9	196 aa		13.47	□□□□□ -0.25
FXR1-208	ENST00000469882	NKX2-3	Q8TAU0	364 aa		13.47	□□□□□ -0.25
FXR1-208	ENST00000469882	LPAR1	Q92633	364 aa		13.47	□□□□□ -0.25
FXR1-208	ENST00000469882	NUDT12	Q9BQG2	462 aa		13.47	□□□□□ -0.25
FXR1-208	ENST00000469882	KANSL2	Q9H9L4	492 aa		13.47	□□□□□ -0.25
FXR1-208	ENST00000469882	COL11A1	P12107	1806 aa	Predicted RBP	13.47	□□□□□ -0.25
FXR1-208	ENST00000469882	RANBP2	P49792	3224 aa	Known RBP	13.47	□□□□□ -0.25
FXR1-208	ENST00000469882	ZNF236	Q9UL36	1845 aa		13.46	□□□□□ -0.25
FXR1-208	ENST00000469882	PRDM1	O75626	825 aa		13.46	□□□□□ -0.25
FXR1-208	ENST00000469882	SGPL1	O95470	568 aa		13.46	□□□□□ -0.25
FXR1-208	ENST00000469882	XRCC5	P13010	732 aa	Known RBP	13.46	□□□□□ -0.25
FXR1-208	ENST00000469882	CCNA1	P78396	465 aa		13.46	□□□□□ -0.25
FXR1-208	ENST00000469882	COG2	Q14746	738 aa		13.46	□□□□□ -0.25
FXR1-208	ENST00000469882	CCL14	Q16627	93 aa		13.46	□□□□□ -0.25
FXR1-208	ENST00000469882	B4GALNT3	Q6L9W6	998 aa		13.46	□□□□□ -0.25
FXR1-208	ENST00000469882	CCAR1	Q8IX12	1150 aa	Known RBP	13.46	□□□□□ -0.25
FXR1-208	ENST00000469882	EVI5L	Q96CN4	794 aa		13.46	□□□□□ -0.25
FXR1-208	ENST00000469882	DEFB118	Q96PH6	123 aa		13.46	□□□□□ -0.25
FXR1-208	ENST00000469882	APBA2	Q99767	749 aa		13.46	□□□□□ -0.25
FXR1-208	ENST00000469882	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	13.46	□□□□□ -0.25	3e-8	■■■■■ 32.6
FXR1-208	ENST00000469882	RWDD1	Q9H446	243 aa	Predicted RBP	13.46	□□□□□ -0.25
FXR1-208	ENST00000469882	MKNK2	Q9HBH9	465 aa		13.46	□□□□□ -0.25
FXR1-208	ENST00000469882	MYH4	Q9Y623	1939 aa		13.46	□□□□□ -0.25
FXR1-208	ENST00000469882	IGKV6D-41	A0A0C4DH26	115 aa		13.45	□□□□□ -0.26
FXR1-208	ENST00000469882	WDR46	O15213	610 aa	Known RBP	13.45	□□□□□ -0.26
FXR1-208	ENST00000469882	FLOT1	O75955	427 aa		13.45	□□□□□ -0.26
FXR1-208	ENST00000469882	ZKSCAN1	P17029	563 aa	Predicted RBP	13.45	□□□□□ -0.26
FXR1-208	ENST00000469882	DSG3	P32926	999 aa		13.45	□□□□□ -0.26
FXR1-208	ENST00000469882	RGS2	P41220	211 aa		13.45	□□□□□ -0.26
FXR1-208	ENST00000469882	MAP3K21	Q5TCX8	1036 aa		13.45	□□□□□ -0.26
FXR1-208	ENST00000469882	WDR78	Q5VTH9	848 aa		13.45	□□□□□ -0.26
FXR1-208	ENST00000469882	ATG4C	Q96DT6	458 aa		13.45	□□□□□ -0.26
FXR1-208	ENST00000469882	NACAP1	Q9BZK3	213 aa		13.45	□□□□□ -0.26
FXR1-208	ENST00000469882	CWC22	Q9HCG8	908 aa	Known RBP	13.45	□□□□□ -0.26
FXR1-208	ENST00000469882	SUPT16H	Q9Y5B9	1047 aa	Known RBP	13.45	□□□□□ -0.26
FXR1-208	ENST00000469882	PLIN4	Q96Q06	1357 aa		13.45	□□□□□ -0.26
FXR1-208	ENST00000469882		A0A0D9SFI3	127 aa		13.44	□□□□□ -0.26
FXR1-208	ENST00000469882	FARP2	O94887	1054 aa	Predicted RBP	13.44	□□□□□ -0.26
FXR1-208	ENST00000469882	PRKAR2A	P13861	404 aa	Known RBP	13.44	□□□□□ -0.26
FXR1-208	ENST00000469882	NUCB1	Q02818	461 aa		13.44	□□□□□ -0.26
FXR1-208	ENST00000469882	MAP2K5	Q13163	448 aa		13.44	□□□□□ -0.26
FXR1-208	ENST00000469882	GRB14	Q14449	540 aa		13.44	□□□□□ -0.26
FXR1-208	ENST00000469882	VPS53	Q5VIR6	699 aa		13.44	□□□□□ -0.26
FXR1-208	ENST00000469882	SAMD1	Q6SPF0	538 aa	Predicted RBP	13.44	□□□□□ -0.26
FXR1-208	ENST00000469882	CHD1L	Q86WJ1	897 aa		13.44	□□□□□ -0.26
FXR1-208	ENST00000469882	FAM227B	Q96M60	508 aa		13.44	□□□□□ -0.26
FXR1-208	ENST00000469882	MOV10L1	Q9BXT6	1211 aa	Known RBP	13.44	□□□□□ -0.26
FXR1-208	ENST00000469882	SPATC1L	Q9H0A9	340 aa		13.44	□□□□□ -0.26
FXR1-208	ENST00000469882	CRISPLD2	Q9H0B8	497 aa		13.44	□□□□□ -0.26
FXR1-208	ENST00000469882	NAPB	Q9H115	298 aa		13.44	□□□□□ -0.26
FXR1-208	ENST00000469882	GOPC	Q9HD26	462 aa		13.44	□□□□□ -0.26
FXR1-208	ENST00000469882	FBXO28	Q9NVF7	368 aa		13.44	□□□□□ -0.26
FXR1-208	ENST00000469882	HOXC10	Q9NYD6	342 aa		13.44	□□□□□ -0.26
FXR1-208	ENST00000469882	DNAH12	Q6ZR08	3092 aa		13.44	□□□□□ -0.26
FXR1-208	ENST00000469882	RPTOR	Q8N122	1335 aa		13.43	□□□□□ -0.26
FXR1-208	ENST00000469882	SLC15A5	A6NIM6	579 aa		13.43	□□□□□ -0.26
FXR1-208	ENST00000469882	RAD21	O60216	631 aa		13.43	□□□□□ -0.26
FXR1-208	ENST00000469882	TFRC	P02786	760 aa	Known RBP	13.43	□□□□□ -0.26
FXR1-208	ENST00000469882	PTPRE	P23469	700 aa		13.43	□□□□□ -0.26
FXR1-208	ENST00000469882	PPARA	Q07869	468 aa		13.43	□□□□□ -0.26
FXR1-208	ENST00000469882	FAM83B	Q5T0W9	1011 aa		13.43	□□□□□ -0.26
FXR1-208	ENST00000469882	MB21D1	Q8N884	522 aa		13.43	□□□□□ -0.26
FXR1-208	ENST00000469882	CEP95	Q96GE4	821 aa		13.43	□□□□□ -0.26
FXR1-208	ENST00000469882	NUP88	Q99567	741 aa	Predicted RBP	13.43	□□□□□ -0.26
FXR1-208	ENST00000469882	FLRT1	Q9NZU1	646 aa		13.43	□□□□□ -0.26
FXR1-208	ENST00000469882	NYAP2	Q9P242	653 aa		13.43	□□□□□ -0.26
FXR1-208	ENST00000469882	FRMPD3	Q5JV73	1810 aa		13.43	□□□□□ -0.26
FXR1-208	ENST00000469882	CEP290	O15078	2479 aa		13.42	□□□□□ -0.26
FXR1-208	ENST00000469882	NDUFB10	O96000	172 aa		13.42	□□□□□ -0.26
FXR1-208	ENST00000469882	ERCC3	P19447	782 aa		13.42	□□□□□ -0.26
FXR1-208	ENST00000469882	CACNB2	Q08289	660 aa	Predicted RBP	13.42	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms