RNA–Protein interactions for RNA: ENST00000469694.5

GPC1-208, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 2,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-208ENST00000469694 EN1Q05925 392 aaPredicted RBP15.81■□□□□ 0.12
GPC1-208ENST00000469694 JAKMIP3Q5VZ66 844 aa15.81■□□□□ 0.12
GPC1-208ENST00000469694 PACS2Q86VP3 889 aa15.81■□□□□ 0.12
GPC1-208ENST00000469694 MRPS27Q92552 414 aaKnown RBP15.81■□□□□ 0.12
GPC1-208ENST00000469694 GOLGA8AA7E2F4 631 aa15.8■□□□□ 0.12
GPC1-208ENST00000469694 PPEF1O14829 653 aaPredicted RBP15.8■□□□□ 0.12
GPC1-208ENST00000469694 USP17L8P0C7I0 530 aa15.8■□□□□ 0.12
GPC1-208ENST00000469694 TTC31Q49AM3 519 aaPredicted RBP15.8■□□□□ 0.12
GPC1-208ENST00000469694 C8orf76Q96K31 380 aa15.8■□□□□ 0.12
GPC1-208ENST00000469694 NMT2O60551 498 aa15.8■□□□□ 0.12
GPC1-208ENST00000469694 SRGNP10124 158 aa15.8■□□□□ 0.12
GPC1-208ENST00000469694 EZH2Q15910 746 aaKnown RBP15.8■□□□□ 0.12
GPC1-208ENST00000469694 SH3RF3Q8TEJ3 882 aaPredicted RBP15.8■□□□□ 0.12
GPC1-208ENST00000469694 NUP133Q8WUM0 1156 aa15.8■□□□□ 0.12
GPC1-208ENST00000469694 PCDHA7Q9UN72 937 aa15.8■□□□□ 0.12
GPC1-208ENST00000469694 KLRG2A4D1S0 409 aaPredicted RBP15.79■□□□□ 0.12
GPC1-208ENST00000469694 WTAPQ15007 396 aa15.79■□□□□ 0.12
GPC1-208ENST00000469694 ADALQ6DHV7 355 aa15.79■□□□□ 0.12
GPC1-208ENST00000469694 SGMS1Q86VZ5 419 aa15.79■□□□□ 0.12
GPC1-208ENST00000469694 CHMP4CQ96CF2 233 aa15.79■□□□□ 0.12
GPC1-208ENST00000469694 WDR24Q96S15 920 aa15.79■□□□□ 0.12
GPC1-208ENST00000469694 BRIP1Q9BX63 1249 aa15.79■□□□□ 0.12
GPC1-208ENST00000469694 PDGFDQ9GZP0 370 aaPredicted RBP15.79■□□□□ 0.12
GPC1-208ENST00000469694 ZNF219Q9P2Y4 722 aaPredicted RBP15.79■□□□□ 0.12
GPC1-208ENST00000469694 MYH15Q9Y2K3 1946 aa15.79■□□□□ 0.12
GPC1-208ENST00000469694 PDS5AQ29RF7 1337 aaKnown RBP15.79■□□□□ 0.12
GPC1-208ENST00000469694 A0A1B0GVL5 298 aa15.79■□□□□ 0.12
GPC1-208ENST00000469694 TXLNAP40222 546 aa15.79■□□□□ 0.12
GPC1-208ENST00000469694 BRD3Q15059 726 aa15.79■□□□□ 0.12
GPC1-208ENST00000469694 FAM47AQ5JRC9 791 aa15.79■□□□□ 0.12
GPC1-208ENST00000469694 FAM177A1Q8N128 213 aaPredicted RBP15.79■□□□□ 0.12
GPC1-208ENST00000469694 WDR66Q8TBY9 1149 aa15.79■□□□□ 0.12
GPC1-208ENST00000469694 UBAC1Q9BSL1 405 aa15.79■□□□□ 0.12
GPC1-208ENST00000469694 CRNKL1Q9BZJ0 848 aaKnown RBP15.79■□□□□ 0.12
GPC1-208ENST00000469694 MCM9Q9NXL9 1143 aa15.79■□□□□ 0.12
GPC1-208ENST00000469694 PPP2R2CQ9Y2T4 447 aa15.79■□□□□ 0.12
GPC1-208ENST00000469694 TNKSO95271 1327 aa15.79■□□□□ 0.12
GPC1-208ENST00000469694 LOC102724159A0A0B4J2E5 919 aa15.78■□□□□ 0.12
GPC1-208ENST00000469694 ATP2B4P23634 1241 aa15.78■□□□□ 0.12
GPC1-208ENST00000469694 LMOD1P29536 600 aaPredicted RBP15.78■□□□□ 0.12
GPC1-208ENST00000469694 LIFRP42702 1097 aa15.78■□□□□ 0.12
GPC1-208ENST00000469694 NDUFA8P51970 172 aa15.78■□□□□ 0.12
GPC1-208ENST00000469694 NLRP12P59046 1061 aa15.78■□□□□ 0.12
GPC1-208ENST00000469694 PWP2Q15269 919 aaKnown RBP15.78■□□□□ 0.12
GPC1-208ENST00000469694 CRAMP1Q96RY5 1269 aa15.78■□□□□ 0.12
GPC1-208ENST00000469694 RNF41Q9H4P4 317 aaPredicted RBP15.78■□□□□ 0.12
GPC1-208ENST00000469694 VPS18Q9P253 973 aa15.78■□□□□ 0.12
GPC1-208ENST00000469694 A0A1W2PQ27 194 aa15.78■□□□□ 0.12
GPC1-208ENST00000469694 A0A1W2PQ64 194 aa15.78■□□□□ 0.12
GPC1-208ENST00000469694 A0A1W2PQD8 194 aa15.78■□□□□ 0.12
GPC1-208ENST00000469694 KIF28PB7ZC32 967 aa15.78■□□□□ 0.12
GPC1-208ENST00000469694 GNG11P61952 73 aa15.78■□□□□ 0.12
GPC1-208ENST00000469694 NTRK3Q16288 839 aa15.78■□□□□ 0.12
GPC1-208ENST00000469694 GOLGA1Q92805 767 aa15.78■□□□□ 0.12
GPC1-208ENST00000469694 NCAPGQ9BPX3 1015 aa15.78■□□□□ 0.12
GPC1-208ENST00000469694 HSD3B7Q9H2F3 369 aa15.78■□□□□ 0.12
GPC1-208ENST00000469694 EIF3CLB5ME19 914 aaKnown RBP15.77■□□□□ 0.12
GPC1-208ENST00000469694 ATP1A3P13637 1013 aa15.77■□□□□ 0.12
GPC1-208ENST00000469694 GUCY1A2P33402 732 aa15.77■□□□□ 0.12
GPC1-208ENST00000469694 MMP14P50281 582 aa15.77■□□□□ 0.12
GPC1-208ENST00000469694 MFSD14BQ5SR56 506 aa15.77■□□□□ 0.12
GPC1-208ENST00000469694 ESR2Q92731 530 aa15.77■□□□□ 0.12
GPC1-208ENST00000469694 ZNF622Q969S3 477 aaKnown RBP eCLIP15.77■□□□□ 0.12
GPC1-208ENST00000469694 EIF3CQ99613 913 aaKnown RBP15.77■□□□□ 0.12
GPC1-208ENST00000469694 MXD3Q9BW11 206 aa15.77■□□□□ 0.12
GPC1-208ENST00000469694 ANAPC4Q9UJX5 808 aa15.77■□□□□ 0.12
GPC1-208ENST00000469694 ERICH2A1L162 156 aa15.77■□□□□ 0.12
GPC1-208ENST00000469694 F8W031 263 aaPredicted RBP15.77■□□□□ 0.12
GPC1-208ENST00000469694 IKBKBO14920 756 aa15.77■□□□□ 0.12
GPC1-208ENST00000469694 ARHGAP6O43182 974 aa15.77■□□□□ 0.12
GPC1-208ENST00000469694 SPTY2D1Q68D10 685 aaPredicted RBP15.77■□□□□ 0.12
GPC1-208ENST00000469694 FOXR1Q6PIV2 292 aa15.77■□□□□ 0.12
GPC1-208ENST00000469694 ENAHQ8N8S7 591 aaPredicted RBP15.77■□□□□ 0.12
GPC1-208ENST00000469694 HNRNPLLQ8WVV9 542 aaKnown RBP15.77■□□□□ 0.12
GPC1-208ENST00000469694 DYNLL2Q96FJ2 89 aa15.77■□□□□ 0.12
GPC1-208ENST00000469694 ALG1Q9BT22 464 aa15.77■□□□□ 0.12
GPC1-208ENST00000469694 SLC26A6Q9BXS9 759 aa15.77■□□□□ 0.12
GPC1-208ENST00000469694 PDE11AQ9HCR9 933 aa15.77■□□□□ 0.12
GPC1-208ENST00000469694 BIN1O00499 593 aa15.77■□□□□ 0.11
GPC1-208ENST00000469694 GTF2IP78347 998 aa15.77■□□□□ 0.11
GPC1-208ENST00000469694 SART3Q15020 963 aaKnown RBP15.77■□□□□ 0.11
GPC1-208ENST00000469694 DOK7Q18PE1 504 aa15.77■□□□□ 0.11
GPC1-208ENST00000469694 TMEM139Q8IV31 216 aa15.77■□□□□ 0.11
GPC1-208ENST00000469694 TGFBRAP1Q8WUH2 860 aa15.77■□□□□ 0.11
GPC1-208ENST00000469694 MYCBPQ99417 103 aaPredicted RBP15.77■□□□□ 0.11
GPC1-208ENST00000469694 SAP30BPQ9UHR5 308 aaKnown RBP15.77■□□□□ 0.11
GPC1-208ENST00000469694 GOLGA6L9A6NEM1 432 aa15.76■□□□□ 0.11
GPC1-208ENST00000469694 SLC3A2P08195 630 aaKnown RBP15.76■□□□□ 0.11
GPC1-208ENST00000469694 USP5P45974 858 aa15.76■□□□□ 0.11
GPC1-208ENST00000469694 UBASH3AP57075 661 aa15.76■□□□□ 0.11
GPC1-208ENST00000469694 MSL3Q8N5Y2 521 aaKnown RBP15.76■□□□□ 0.11
GPC1-208ENST00000469694 DPF2Q92785 391 aa15.76■□□□□ 0.11
GPC1-208ENST00000469694 KIFC2Q96AC6 838 aa15.76■□□□□ 0.11
GPC1-208ENST00000469694 TIAM2Q8IVF5 1701 aa15.76■□□□□ 0.11
GPC1-208ENST00000469694 hCG_1642624A0A1W2PR95 340 aa15.76■□□□□ 0.11
GPC1-208ENST00000469694 IARSP41252 1262 aaKnown RBP15.76■□□□□ 0.11
GPC1-208ENST00000469694 BEND6Q5SZJ8 279 aaPredicted RBP15.76■□□□□ 0.11
GPC1-208ENST00000469694 MAPKAPK5Q8IW41 473 aa15.76■□□□□ 0.11
GPC1-208ENST00000469694 RTEL1Q9NZ71 1219 aa15.76■□□□□ 0.11
GPC1-208ENST00000469694 ATP6V0A2Q9Y487 856 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms