RNA–Protein interactions for RNA: ENST00000469670.1

TTC28-205, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-205ENST00000469670 SPATC1LQ9H0A9 340 aa22.25■■□□□ 1.15
TTC28-205ENST00000469670 HOXC10Q9NYD6 342 aa22.25■■□□□ 1.15
TTC28-205ENST00000469670 RLFQ13129 1914 aa22.24■■□□□ 1.15
TTC28-205ENST00000469670 TRIM27P14373 513 aa22.24■■□□□ 1.15
TTC28-205ENST00000469670 ERCC3P19447 782 aa22.24■■□□□ 1.15
TTC28-205ENST00000469670 POLA2Q14181 598 aa22.24■■□□□ 1.15
TTC28-205ENST00000469670 PRAMEF19Q5SWL8 479 aa22.24■■□□□ 1.15
TTC28-205ENST00000469670 MAGEB6Q8N7X4 407 aa22.24■■□□□ 1.15
TTC28-205ENST00000469670 SHCBP1Q8NEM2 672 aa22.24■■□□□ 1.15
TTC28-205ENST00000469670 SYMPKQ92797 1274 aaKnown RBP22.24■■□□□ 1.15
TTC28-205ENST00000469670 SLC5A4Q9NY91 659 aa22.24■■□□□ 1.15
TTC28-205ENST00000469670 TNNQ9UQP3 1299 aa22.24■■□□□ 1.15
TTC28-205ENST00000469670 IPO8O15397 1037 aaKnown RBP22.23■■□□□ 1.15
TTC28-205ENST00000469670 PLCD1P51178 756 aa22.23■■□□□ 1.15
TTC28-205ENST00000469670 SEPT2Q15019 361 aa22.23■■□□□ 1.15
TTC28-205ENST00000469670 TANGO6Q9C0B7 1094 aa22.23■■□□□ 1.15
TTC28-205ENST00000469670 DBNLQ9UJU6 430 aaKnown RBP22.23■■□□□ 1.15
TTC28-205ENST00000469670 TMEM265A0A087WTH1 108 aa22.22■■□□□ 1.15
TTC28-205ENST00000469670 TLE2Q04725 743 aa22.22■■□□□ 1.15
TTC28-205ENST00000469670 FAM47AQ5JRC9 791 aa22.22■■□□□ 1.15
TTC28-205ENST00000469670 RNPC3Q96LT9 517 aaKnown RBP22.22■■□□□ 1.15
TTC28-205ENST00000469670 TLR7Q9NYK1 1049 aaKnown RBP22.22■■□□□ 1.15
TTC28-205ENST00000469670 TACC3Q9Y6A5 838 aa22.22■■□□□ 1.15
TTC28-205ENST00000469670 ZNF236Q9UL36 1845 aa22.22■■□□□ 1.15
TTC28-205ENST00000469670 CDH23Q9H251 3354 aa22.21■■□□□ 1.15
TTC28-205ENST00000469670 A0A1W2PRG0 241 aa22.21■■□□□ 1.15
TTC28-205ENST00000469670 SURF6O75683 361 aaKnown RBP22.21■■□□□ 1.15
TTC28-205ENST00000469670 ITGB8P26012 769 aa22.21■■□□□ 1.15
TTC28-205ENST00000469670 SSH3Q8TE77 659 aa22.21■■□□□ 1.15
TTC28-205ENST00000469670 CCDC8Q9H0W5 538 aaPredicted RBP22.21■■□□□ 1.15
TTC28-205ENST00000469670 MROH8Q9H579 483 aa22.21■■□□□ 1.15
TTC28-205ENST00000469670 PRUNE2Q8WUY3 3088 aa22.21■■□□□ 1.15
TTC28-205ENST00000469670 MYH1P12882 1939 aa22.2■■□□□ 1.14
TTC28-205ENST00000469670 POLR3DP05423 398 aaPredicted RBP22.2■■□□□ 1.14
TTC28-205ENST00000469670 NCAPG2Q86XI2 1143 aa22.2■■□□□ 1.14
TTC28-205ENST00000469670 ABRAQ8N0Z2 381 aa22.2■■□□□ 1.14
TTC28-205ENST00000469670 MB21D1Q8N884 522 aa22.2■■□□□ 1.14
TTC28-205ENST00000469670 CLUAP1Q96AJ1 413 aa22.2■■□□□ 1.14
TTC28-205ENST00000469670 MAML3Q96JK9 1138 aa22.2■■□□□ 1.14
TTC28-205ENST00000469670 PHF24Q9UPV7 400 aa22.2■■□□□ 1.14
TTC28-205ENST00000469670 MPHOSPH10O00566 681 aaKnown RBP22.19■■□□□ 1.14
TTC28-205ENST00000469670 CLTBP09497 229 aa22.19■■□□□ 1.14
TTC28-205ENST00000469670 EPHB4P54760 987 aa22.19■■□□□ 1.14
TTC28-205ENST00000469670 ATP8B2P98198 1209 aa22.19■■□□□ 1.14
TTC28-205ENST00000469670 GABPAQ06546 454 aa22.19■■□□□ 1.14
TTC28-205ENST00000469670 MAP3K12Q12852 859 aa22.19■■□□□ 1.14
TTC28-205ENST00000469670 PLS1Q14651 629 aa22.19■■□□□ 1.14
TTC28-205ENST00000469670 FRAT1Q92837 279 aaPredicted RBP22.19■■□□□ 1.14
TTC28-205ENST00000469670 MYO5AQ9Y4I1 1855 aaKnown RBP22.19■■□□□ 1.14
TTC28-205ENST00000469670 TTC28Q96AY4 2481 aa22.18■■□□□ 1.14
TTC28-205ENST00000469670 BCAR3O75815 825 aa22.18■■□□□ 1.14
TTC28-205ENST00000469670 DSG3P32926 999 aa22.18■■□□□ 1.14
TTC28-205ENST00000469670 TMED8Q6PL24 325 aaPredicted RBP22.18■■□□□ 1.14
TTC28-205ENST00000469670 RIOK1Q9BRS2 568 aaKnown RBP22.18■■□□□ 1.14
TTC28-205ENST00000469670 ANTXR1Q9H6X2 564 aa22.18■■□□□ 1.14
TTC28-205ENST00000469670 XPNPEP3Q9NQH7 507 aa22.18■■□□□ 1.14
TTC28-205ENST00000469670 KIAA0355O15063 1070 aa22.17■■□□□ 1.14
TTC28-205ENST00000469670 RARBP10826 455 aa22.17■■□□□ 1.14
TTC28-205ENST00000469670 RAG1P15918 1043 aa22.17■■□□□ 1.14
TTC28-205ENST00000469670 GRIN2CQ14957 1233 aa22.17■■□□□ 1.14
TTC28-205ENST00000469670 KIAA1755Q5JYT7 1200 aa22.17■■□□□ 1.14
TTC28-205ENST00000469670 EAF2Q96CJ1 260 aaPredicted RBP22.17■■□□□ 1.14
TTC28-205ENST00000469670 NOP58Q9Y2X3 529 aaKnown RBP22.17■■□□□ 1.14
TTC28-205ENST00000469670 FCER1AP12319 257 aa22.16■■□□□ 1.14
TTC28-205ENST00000469670 TJAP1Q5JTD0 557 aa22.16■■□□□ 1.14
TTC28-205ENST00000469670 RNF180Q86T96 592 aa22.16■■□□□ 1.14
TTC28-205ENST00000469670 TMEM57Q8N5G2 664 aa22.16■■□□□ 1.14
TTC28-205ENST00000469670 ATG4CQ96DT6 458 aa22.16■■□□□ 1.14
TTC28-205ENST00000469670 NRBP1Q9UHY1 535 aa22.16■■□□□ 1.14
TTC28-205ENST00000469670 PQBP1O60828 265 aaKnown RBP22.15■■□□□ 1.14
TTC28-205ENST00000469670 FLOT1O75955 427 aa22.15■■□□□ 1.14
TTC28-205ENST00000469670 PGK1P00558 417 aa22.15■■□□□ 1.14
TTC28-205ENST00000469670 DNAJB2P25686 324 aa22.15■■□□□ 1.14
TTC28-205ENST00000469670 EVX2Q03828 476 aa22.15■■□□□ 1.14
TTC28-205ENST00000469670 FPGSQ05932 587 aa22.15■■□□□ 1.14
TTC28-205ENST00000469670 USP38Q8NB14 1042 aa22.15■■□□□ 1.14
TTC28-205ENST00000469670 A0A0G2JMZ2 1700 aa22.14■■□□□ 1.14
TTC28-205ENST00000469670 MAGEB6P1A0A0J9YX57 407 aa22.14■■□□□ 1.13
TTC28-205ENST00000469670 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.14■■□□□ 1.13
TTC28-205ENST00000469670 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.14■■□□□ 1.13
TTC28-205ENST00000469670 A0A1W2PQ45 241 aaPredicted RBP22.14■■□□□ 1.13
TTC28-205ENST00000469670 A0A1W2PQY0 241 aa22.14■■□□□ 1.13
TTC28-205ENST00000469670 TMEM179Q6ZVK1 233 aa22.14■■□□□ 1.13
TTC28-205ENST00000469670 C1orf115Q9H7X2 142 aa22.14■■□□□ 1.13
TTC28-205ENST00000469670 TMEM39AQ9NV64 488 aa22.14■■□□□ 1.13
TTC28-205ENST00000469670 MCM9Q9NXL9 1143 aa22.14■■□□□ 1.13
TTC28-205ENST00000469670 TNFRSF10AO00220 468 aa22.13■■□□□ 1.13
TTC28-205ENST00000469670 SLC25A27O95847 323 aa22.13■■□□□ 1.13
TTC28-205ENST00000469670 TMEM132BQ14DG7 1078 aa22.13■■□□□ 1.13
TTC28-205ENST00000469670 SAMD1Q6SPF0 538 aaPredicted RBP22.13■■□□□ 1.13
TTC28-205ENST00000469670 SPICE1Q8N0Z3 855 aa22.13■■□□□ 1.13
TTC28-205ENST00000469670 MMP19Q99542 508 aa22.13■■□□□ 1.13
TTC28-205ENST00000469670 CRNKL1Q9BZJ0 848 aaKnown RBP22.13■■□□□ 1.13
TTC28-205ENST00000469670 COL9A1P20849 921 aa22.12■■□□□ 1.13
TTC28-205ENST00000469670 SLC44A5Q8NCS7 719 aa22.12■■□□□ 1.13
TTC28-205ENST00000469670 TINF2Q9BSI4 451 aa22.12■■□□□ 1.13
TTC28-205ENST00000469670 ZNF576Q9H609 170 aa22.12■■□□□ 1.13
TTC28-205ENST00000469670 ARHGEF10LQ9HCE6 1279 aa22.12■■□□□ 1.13
TTC28-205ENST00000469670 TMX2Q9Y320 296 aa22.12■■□□□ 1.13
TTC28-205ENST00000469670 PGK2P07205 417 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms