RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 CTAGE15A4D2H0 777 aa16.83■□□□□ 0.28
LIMS2-213ENST00000469300 CTAGE8P0CG41 777 aa16.83■□□□□ 0.28
LIMS2-213ENST00000469300 CDC37L1Q7L3B6 337 aa16.83■□□□□ 0.28
LIMS2-213ENST00000469300 CTAGE6Q86UF2 777 aa16.83■□□□□ 0.28
LIMS2-213ENST00000469300 CTAGE4Q8IX94 777 aa16.83■□□□□ 0.28
LIMS2-213ENST00000469300 FAM173BQ6P4H8 233 aa16.82■□□□□ 0.28
LIMS2-213ENST00000469300 COL15A1P39059 1388 aa16.82■□□□□ 0.28
LIMS2-213ENST00000469300 PTGS1P23219 599 aa16.82■□□□□ 0.28
LIMS2-213ENST00000469300 SLC8A3P57103 927 aa16.82■□□□□ 0.28
LIMS2-213ENST00000469300 NEK8Q86SG6 692 aa16.82■□□□□ 0.28
LIMS2-213ENST00000469300 DHX37Q8IY37 1157 aaKnown RBP16.82■□□□□ 0.28
LIMS2-213ENST00000469300 CSRNP1Q96S65 589 aa16.82■□□□□ 0.28
LIMS2-213ENST00000469300 AMNQ9BXJ7 453 aa16.82■□□□□ 0.28
LIMS2-213ENST00000469300 RNF26Q9BY78 433 aaPredicted RBP16.82■□□□□ 0.28
LIMS2-213ENST00000469300 HOMER2Q9NSB8 354 aa16.82■□□□□ 0.28
LIMS2-213ENST00000469300 ABCA6Q8N139 1617 aa16.82■□□□□ 0.28
LIMS2-213ENST00000469300 FSD2A1L4K1 749 aa16.82■□□□□ 0.28
LIMS2-213ENST00000469300 CYP19A1P11511 503 aaPredicted RBP16.82■□□□□ 0.28
LIMS2-213ENST00000469300 IQCDQ96DY2 449 aa16.82■□□□□ 0.28
LIMS2-213ENST00000469300 RGS12O14924 1447 aa16.82■□□□□ 0.28
LIMS2-213ENST00000469300 USP17L3A6NCW0 530 aa16.81■□□□□ 0.28
LIMS2-213ENST00000469300 USP17L4A6NCW7 530 aa16.81■□□□□ 0.28
LIMS2-213ENST00000469300 AKR1B15C9JRZ8 316 aaPredicted RBP16.81■□□□□ 0.28
LIMS2-213ENST00000469300 ADD1P35611 737 aaKnown RBP16.81■□□□□ 0.28
LIMS2-213ENST00000469300 SNX16P57768 344 aa16.81■□□□□ 0.28
LIMS2-213ENST00000469300 POSTNQ15063 836 aa16.81■□□□□ 0.28
LIMS2-213ENST00000469300 USP17L1Q7RTZ2 530 aa16.81■□□□□ 0.28
LIMS2-213ENST00000469300 TLR7Q9NYK1 1049 aaKnown RBP16.81■□□□□ 0.28
LIMS2-213ENST00000469300 H0YCG3 227 aa16.81■□□□□ 0.28
LIMS2-213ENST00000469300 TTLL1O95922 423 aa16.81■□□□□ 0.28
LIMS2-213ENST00000469300 ALAS1P13196 640 aa16.81■□□□□ 0.28
LIMS2-213ENST00000469300 MNAT1P51948 309 aa16.81■□□□□ 0.28
LIMS2-213ENST00000469300 NLRP12P59046 1061 aa16.81■□□□□ 0.28
LIMS2-213ENST00000469300 ARID5AQ03989 594 aa16.81■□□□□ 0.28
LIMS2-213ENST00000469300 TSGA10Q9BZW7 698 aa16.81■□□□□ 0.28
LIMS2-213ENST00000469300 CCDC113Q9H0I3 377 aa16.81■□□□□ 0.28
LIMS2-213ENST00000469300 ARHGEF40Q8TER5 1519 aa16.81■□□□□ 0.28
LIMS2-213ENST00000469300 CARMIL3Q8ND23 1372 aa16.81■□□□□ 0.28
LIMS2-213ENST00000469300 CTAGE9A4FU28 777 aa16.81■□□□□ 0.28
LIMS2-213ENST00000469300 TRAPPC10P48553 1259 aa16.81■□□□□ 0.28
LIMS2-213ENST00000469300 VPS72Q15906 364 aa16.81■□□□□ 0.28
LIMS2-213ENST00000469300 MYO3BQ8WXR4 1341 aa16.81■□□□□ 0.28
LIMS2-213ENST00000469300 STX10O60499 249 aa16.81■□□□□ 0.28
LIMS2-213ENST00000469300 KCNQ4P56696 695 aa16.81■□□□□ 0.28
LIMS2-213ENST00000469300 CCNA1P78396 465 aa16.81■□□□□ 0.28
LIMS2-213ENST00000469300 FOXP4Q8IVH2 680 aaPredicted RBP16.81■□□□□ 0.28
LIMS2-213ENST00000469300 CEP112Q8N8E3 955 aa16.81■□□□□ 0.28
LIMS2-213ENST00000469300 CTNND2Q9UQB3 1225 aa16.81■□□□□ 0.28
LIMS2-213ENST00000469300 CLTCQ00610 1675 aaKnown RBP16.81■□□□□ 0.28
LIMS2-213ENST00000469300 PDIA3P30101 505 aaKnown RBP16.8■□□□□ 0.28
LIMS2-213ENST00000469300 CIAPIN1Q6FI81 312 aa16.8■□□□□ 0.28
LIMS2-213ENST00000469300 LRRC47Q8N1G4 583 aaKnown RBP16.8■□□□□ 0.28
LIMS2-213ENST00000469300 PI4KBQ9UBF8 816 aa16.8■□□□□ 0.28
LIMS2-213ENST00000469300 ZKSCAN5Q9Y2L8 839 aa16.8■□□□□ 0.28
LIMS2-213ENST00000469300 SYNRGQ9UMZ2 1314 aa16.8■□□□□ 0.28
LIMS2-213ENST00000469300 MIER3Q7Z3K6 550 aa16.8■□□□□ 0.28
LIMS2-213ENST00000469300 CCDC84Q86UT8 332 aaPredicted RBP16.8■□□□□ 0.28
LIMS2-213ENST00000469300 HACE1Q8IYU2 909 aa16.8■□□□□ 0.28
LIMS2-213ENST00000469300 DNAI1Q9UI46 699 aa16.8■□□□□ 0.28
LIMS2-213ENST00000469300 TUBBP07437 444 aa16.8■□□□□ 0.28
LIMS2-213ENST00000469300 TRPC3Q13507 836 aa16.8■□□□□ 0.28
LIMS2-213ENST00000469300 KIF22Q14807 665 aa16.8■□□□□ 0.28
LIMS2-213ENST00000469300 NOLC1Q14978 699 aaKnown RBP eCLIP16.8■□□□□ 0.28
LIMS2-213ENST00000469300 ARHGEF6Q15052 776 aa16.8■□□□□ 0.28
LIMS2-213ENST00000469300 ARHGEF16Q5VV41 709 aa16.8■□□□□ 0.28
LIMS2-213ENST00000469300 TPCN1Q9ULQ1 816 aa16.8■□□□□ 0.28
LIMS2-213ENST00000469300 PCDHA12Q9UN75 941 aa16.8■□□□□ 0.28
LIMS2-213ENST00000469300 M0QZ92 97 aa16.8■□□□□ 0.28
LIMS2-213ENST00000469300 IGSF3O75054 1194 aa16.8■□□□□ 0.28
LIMS2-213ENST00000469300 FLOT1O75955 427 aa16.8■□□□□ 0.28
LIMS2-213ENST00000469300 IGKV5-2P06315 115 aa16.8■□□□□ 0.28
LIMS2-213ENST00000469300 SMC1AQ14683 1233 aaKnown RBP16.8■□□□□ 0.28
LIMS2-213ENST00000469300 TMX1Q9H3N1 280 aa16.8■□□□□ 0.28
LIMS2-213ENST00000469300 DBNDD1Q9H9R9 158 aa16.8■□□□□ 0.28
LIMS2-213ENST00000469300 TMEM232C9JQI7 657 aa16.79■□□□□ 0.28
LIMS2-213ENST00000469300 SASH1O94885 1247 aa16.79■□□□□ 0.28
LIMS2-213ENST00000469300 MYCT1Q8N699 235 aa16.79■□□□□ 0.28
LIMS2-213ENST00000469300 FBXO18Q8NFZ0 1043 aa16.79■□□□□ 0.28
LIMS2-213ENST00000469300 PIM2Q9P1W9 311 aa16.79■□□□□ 0.28
LIMS2-213ENST00000469300 LMAN1P49257 510 aa16.79■□□□□ 0.28
LIMS2-213ENST00000469300 MICALCLQ6ZW33 695 aa16.79■□□□□ 0.28
LIMS2-213ENST00000469300 ISCA1Q9BUE6 129 aa16.79■□□□□ 0.28
LIMS2-213ENST00000469300 RBSNQ9H1K0 784 aa16.79■□□□□ 0.28
LIMS2-213ENST00000469300 PALD1Q9ULE6 856 aa16.79■□□□□ 0.28
LIMS2-213ENST00000469300 PPRC1Q5VV67 1664 aaKnown RBP16.79■□□□□ 0.28
LIMS2-213ENST00000469300 ATP2A1O14983 1001 aa16.79■□□□□ 0.28
LIMS2-213ENST00000469300 CYP21A2P08686 494 aa16.79■□□□□ 0.28
LIMS2-213ENST00000469300 OR52Z1P0C646 297 aa16.79■□□□□ 0.28
LIMS2-213ENST00000469300 PKP1Q13835 747 aa16.79■□□□□ 0.28
LIMS2-213ENST00000469300 RAPGEF1Q13905 1077 aa16.79■□□□□ 0.28
LIMS2-213ENST00000469300 HLFQ16534 295 aa16.79■□□□□ 0.28
LIMS2-213ENST00000469300 PCDHA1Q9Y5I3 950 aa16.79■□□□□ 0.28
LIMS2-213ENST00000469300 ZC3H13Q5T200 1668 aaKnown RBP16.79■□□□□ 0.28
LIMS2-213ENST00000469300 hCG_1642624A0A1W2PR95 340 aa16.79■□□□□ 0.28
LIMS2-213ENST00000469300 LAD1O00515 517 aa16.79■□□□□ 0.28
LIMS2-213ENST00000469300 GNA14O95837 355 aa16.79■□□□□ 0.28
LIMS2-213ENST00000469300 APOA5Q6Q788 366 aa16.79■□□□□ 0.28
LIMS2-213ENST00000469300 NOX5Q96PH1 765 aa16.79■□□□□ 0.28
LIMS2-213ENST00000469300 IKBKGQ9Y6K9 419 aa16.79■□□□□ 0.28
LIMS2-213ENST00000469300 QRICH2Q9H0J4 1663 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms