RNA–Protein interactions for RNA: ENST00000468723.1

GPNMB-207, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 808 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-207ENST00000468723 NLRC3Q7RTR2 1065 aa6.48□□□□□ -1.37
GPNMB-207ENST00000468723 THAP5Q7Z6K1 395 aa6.48□□□□□ -1.37
GPNMB-207ENST00000468723 CREG2Q8IUH2 290 aa6.48□□□□□ -1.37
GPNMB-207ENST00000468723 TMEM40Q8WWA1 233 aa6.48□□□□□ -1.37
GPNMB-207ENST00000468723 ZNF512BQ96KM6 892 aaPredicted RBP6.48□□□□□ -1.37
GPNMB-207ENST00000468723 FERD3LQ96RJ6 166 aa6.48□□□□□ -1.37
GPNMB-207ENST00000468723 PPT2Q9UMR5 302 aa6.48□□□□□ -1.37
GPNMB-207ENST00000468723 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.48□□□□□ -1.37
GPNMB-207ENST00000468723 NME1P15531 152 aaKnown RBP6.47□□□□□ -1.37
GPNMB-207ENST00000468723 LRRFIP1Q32MZ4 808 aaKnown RBP6.47□□□□□ -1.37
GPNMB-207ENST00000468723 GPATCH2Q9NW75 528 aa6.47□□□□□ -1.37
GPNMB-207ENST00000468723 LMCD1Q9NZU5 365 aa6.47□□□□□ -1.37
GPNMB-207ENST00000468723 SHISA3A0PJX4 238 aa6.46□□□□□ -1.38
GPNMB-207ENST00000468723 ESR1P03372 595 aa6.46□□□□□ -1.38
GPNMB-207ENST00000468723 RBM25P49756 843 aaKnown RBP6.46□□□□□ -1.38
GPNMB-207ENST00000468723 CCDC81Q6ZN84 652 aa6.46□□□□□ -1.38
GPNMB-207ENST00000468723 VWCEQ96DN2 955 aa6.46□□□□□ -1.38
GPNMB-207ENST00000468723 SLC9A7Q96T83 725 aa6.46□□□□□ -1.38
GPNMB-207ENST00000468723 ASPNQ9BXN1 380 aa6.46□□□□□ -1.38
GPNMB-207ENST00000468723 TRIT1Q9H3H1 467 aaKnown RBP6.46□□□□□ -1.38
GPNMB-207ENST00000468723 GINM1Q9NU53 330 aa6.46□□□□□ -1.38
GPNMB-207ENST00000468723 SLAMF8Q9P0V8 285 aa6.46□□□□□ -1.38
GPNMB-207ENST00000468723 DUSP13Q9UII6 198 aa6.46□□□□□ -1.38
GPNMB-207ENST00000468723 ZNRF3Q9ULT6 936 aa6.46□□□□□ -1.38
GPNMB-207ENST00000468723 EFR3BQ9Y2G0 817 aa6.46□□□□□ -1.38
GPNMB-207ENST00000468723 PAPLNO95428 1278 aa6.45□□□□□ -1.38
GPNMB-207ENST00000468723 SRFP11831 508 aa6.45□□□□□ -1.38
GPNMB-207ENST00000468723 ITGB5P18084 799 aa6.45□□□□□ -1.38
GPNMB-207ENST00000468723 CLEC16AQ2KHT3 1053 aa6.45□□□□□ -1.38
GPNMB-207ENST00000468723 NBPF12Q5TAG4 269 aaPredicted RBP6.45□□□□□ -1.38
GPNMB-207ENST00000468723 RUFY4Q6ZNE9 571 aa6.45□□□□□ -1.38
GPNMB-207ENST00000468723 TSPYL5Q86VY4 417 aaPredicted RBP6.45□□□□□ -1.38
GPNMB-207ENST00000468723 TMEM192Q8IY95 271 aa6.45□□□□□ -1.38
GPNMB-207ENST00000468723 GPR62Q9BZJ7 368 aa6.45□□□□□ -1.38
GPNMB-207ENST00000468723 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.45□□□□□ -1.38
GPNMB-207ENST00000468723 ACBD3Q9H3P7 528 aa6.45□□□□□ -1.38
GPNMB-207ENST00000468723 DNAJC25-GNG10A0A024R161 153 aa6.44□□□□□ -1.38
GPNMB-207ENST00000468723 MEIS3P2A8K0S8 358 aa6.44□□□□□ -1.38
GPNMB-207ENST00000468723 PAX4O43316 350 aa6.44□□□□□ -1.38
GPNMB-207ENST00000468723 CLEC3AO75596 197 aa6.44□□□□□ -1.38
GPNMB-207ENST00000468723 SNW1Q13573 536 aaKnown RBP6.44□□□□□ -1.38
GPNMB-207ENST00000468723 RALGPS1Q5JS13 557 aa6.44□□□□□ -1.38
GPNMB-207ENST00000468723 TMPRSS7Q7RTY8 843 aa6.44□□□□□ -1.38
GPNMB-207ENST00000468723 ATG4DQ86TL0 474 aaPredicted RBP6.44□□□□□ -1.38
GPNMB-207ENST00000468723 GPRASP2Q96D09 838 aa6.44□□□□□ -1.38
GPNMB-207ENST00000468723 SLC6A18Q96N87 628 aa6.44□□□□□ -1.38
GPNMB-207ENST00000468723 RNF114Q9Y508 228 aa6.44□□□□□ -1.38
GPNMB-207ENST00000468723 BIN1O00499 593 aa6.43□□□□□ -1.38
GPNMB-207ENST00000468723 TNFRSF10CO14798 259 aa6.43□□□□□ -1.38
GPNMB-207ENST00000468723 ACRP10323 421 aa6.43□□□□□ -1.38
GPNMB-207ENST00000468723 JUNBP17275 347 aaPredicted RBP6.43□□□□□ -1.38
GPNMB-207ENST00000468723 LTKP29376 864 aa6.43□□□□□ -1.38
GPNMB-207ENST00000468723 RNF4P78317 190 aa6.43□□□□□ -1.38
GPNMB-207ENST00000468723 EGR3Q06889 387 aa6.43□□□□□ -1.38
GPNMB-207ENST00000468723 GAB4Q2WGN9 574 aa6.43□□□□□ -1.38
GPNMB-207ENST00000468723 TMC3Q7Z5M5 1100 aa6.43□□□□□ -1.38
GPNMB-207ENST00000468723 ALPK1Q96QP1 1244 aa6.43□□□□□ -1.38
GPNMB-207ENST00000468723 MKRN2Q9H000 416 aaKnown RBP6.43□□□□□ -1.38
GPNMB-207ENST00000468723 ASCC2Q9H1I8 757 aaPredicted RBP6.43□□□□□ -1.38
GPNMB-207ENST00000468723 ADAMTS10Q9H324 1103 aa6.43□□□□□ -1.38
GPNMB-207ENST00000468723 CTNND2Q9UQB3 1225 aa6.43□□□□□ -1.38
GPNMB-207ENST00000468723 PCDHA11Q9Y5I1 949 aa6.43□□□□□ -1.38
GPNMB-207ENST00000468723 IMPDH2P12268 514 aa6.42□□□□□ -1.38
GPNMB-207ENST00000468723 HK2P52789 917 aa6.42□□□□□ -1.38
GPNMB-207ENST00000468723 RAD51AP2Q09MP3 1159 aa6.42□□□□□ -1.38
GPNMB-207ENST00000468723 NMIQ13287 307 aaPredicted RBP6.42□□□□□ -1.38
GPNMB-207ENST00000468723 NBPF9Q3BBW0 867 aa6.42□□□□□ -1.38
GPNMB-207ENST00000468723 FYB2Q5VWT5 728 aa6.42□□□□□ -1.38
GPNMB-207ENST00000468723 TTC6Q86TZ1 520 aa6.42□□□□□ -1.38
GPNMB-207ENST00000468723 ASIC4Q96FT7 647 aa6.42□□□□□ -1.38
GPNMB-207ENST00000468723 CRBNQ96SW2 442 aa6.42□□□□□ -1.38
GPNMB-207ENST00000468723 TGIF2Q9GZN2 237 aa6.42□□□□□ -1.38
GPNMB-207ENST00000468723 CCSER2Q9H7U1 834 aa6.42□□□□□ -1.38
GPNMB-207ENST00000468723 FAM86C1Q9NVL1 165 aa6.42□□□□□ -1.38
GPNMB-207ENST00000468723 C19orf73Q9NVV2 129 aa6.42□□□□□ -1.38
GPNMB-207ENST00000468723 MINPP1Q9UNW1 487 aa6.42□□□□□ -1.38
GPNMB-207ENST00000468723 INPP5FQ9Y2H2 1132 aa6.42□□□□□ -1.38
GPNMB-207ENST00000468723 CARMIL2Q6F5E8 1435 aa6.42□□□□□ -1.38
GPNMB-207ENST00000468723 CCNFP41002 786 aa6.41□□□□□ -1.38
GPNMB-207ENST00000468723 NASPP49321 788 aaPredicted RBP6.41□□□□□ -1.38
GPNMB-207ENST00000468723 ERVFC1P60507 584 aa6.41□□□□□ -1.38
GPNMB-207ENST00000468723 ZYXQ15942 572 aaKnown RBP6.41□□□□□ -1.38
GPNMB-207ENST00000468723 LCE3BQ5TA77 95 aa6.41□□□□□ -1.38
GPNMB-207ENST00000468723 TDRD10Q5VZ19 366 aaKnown RBP6.41□□□□□ -1.38
GPNMB-207ENST00000468723 LSRQ86X29 649 aaPredicted RBP6.41□□□□□ -1.38
GPNMB-207ENST00000468723 FAM168AQ92567 244 aa6.41□□□□□ -1.38
GPNMB-207ENST00000468723 PRDM14Q9GZV8 571 aa6.41□□□□□ -1.38
GPNMB-207ENST00000468723 FBXL21Q9UKT6 434 aa6.41□□□□□ -1.38
GPNMB-207ENST00000468723 C9IYK1 514 aa6.4□□□□□ -1.38
GPNMB-207ENST00000468723 MEIS1O00470 390 aa6.4□□□□□ -1.38
GPNMB-207ENST00000468723 ERCC5P28715 1186 aaPredicted RBP6.4□□□□□ -1.38
GPNMB-207ENST00000468723 COL9A2Q14055 689 aaPredicted RBP6.4□□□□□ -1.38
GPNMB-207ENST00000468723 INTS3Q68E01 1043 aaKnown RBP6.4□□□□□ -1.38
GPNMB-207ENST00000468723 FLAD1Q8NFF5 587 aa6.4□□□□□ -1.38
GPNMB-207ENST00000468723 RASGRP4Q8TDF6 673 aa6.4□□□□□ -1.38
GPNMB-207ENST00000468723 TMEM59LQ9UK28 342 aa6.4□□□□□ -1.38
GPNMB-207ENST00000468723 ABCC9O60706 1549 aa6.4□□□□□ -1.39
GPNMB-207ENST00000468723 PRAMEF1O95521 474 aa6.39□□□□□ -1.39
GPNMB-207ENST00000468723 TP53P04637 393 aaPredicted RBP6.39□□□□□ -1.39
GPNMB-207ENST00000468723 TCF3P15923 654 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms