RNA–Protein interactions for RNA: ENST00000468477.1

CDHR3-206, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-206ENST00000468477 GOLGA6BA6NDN3 693 aa4.57□□□□□ -1.68
CDHR3-206ENST00000468477 KCNQ2O43526 872 aa4.57□□□□□ -1.68
CDHR3-206ENST00000468477 ASMTLO95671 621 aa4.57□□□□□ -1.68
CDHR3-206ENST00000468477 GOLGA6DP0CG33 693 aa4.57□□□□□ -1.68
CDHR3-206ENST00000468477 ESRRAP11474 423 aaPredicted RBP4.57□□□□□ -1.68
CDHR3-206ENST00000468477 PMLP29590 882 aa4.57□□□□□ -1.68
CDHR3-206ENST00000468477 CASP2P42575 452 aa4.57□□□□□ -1.68
CDHR3-206ENST00000468477 PREPP48147 710 aa4.57□□□□□ -1.68
CDHR3-206ENST00000468477 NFKB2Q00653 900 aa4.57□□□□□ -1.68
CDHR3-206ENST00000468477 TCEA2Q15560 299 aa4.57□□□□□ -1.68
CDHR3-206ENST00000468477 TAF1CQ15572 869 aaPredicted RBP4.57□□□□□ -1.68
CDHR3-206ENST00000468477 CCDC96Q2M329 555 aa4.57□□□□□ -1.68
CDHR3-206ENST00000468477 ALFQ53S48 1182 aa4.57□□□□□ -1.68
CDHR3-206ENST00000468477 DALRD3Q5D0E6 543 aaKnown RBP4.57□□□□□ -1.68
CDHR3-206ENST00000468477 CT47A1Q5JQC4 288 aaPredicted RBP4.57□□□□□ -1.68
CDHR3-206ENST00000468477 MEI1Q5TIA1 1274 aa4.57□□□□□ -1.68
CDHR3-206ENST00000468477 VN1R5Q7Z5H4 357 aa4.57□□□□□ -1.68
CDHR3-206ENST00000468477 GALNT12Q8IXK2 581 aa4.57□□□□□ -1.68
CDHR3-206ENST00000468477 SPICE1Q8N0Z3 855 aa4.57□□□□□ -1.68
CDHR3-206ENST00000468477 ANAPC16Q96DE5 110 aa4.57□□□□□ -1.68
CDHR3-206ENST00000468477 HHIPQ96QV1 700 aa4.57□□□□□ -1.68
CDHR3-206ENST00000468477 CORO1BQ9BR76 489 aa4.57□□□□□ -1.68
CDHR3-206ENST00000468477 SPON2Q9BUD6 331 aa4.57□□□□□ -1.68
CDHR3-206ENST00000468477 DNAJC25Q9H1X3 360 aa4.57□□□□□ -1.68
CDHR3-206ENST00000468477 SUGCTQ9HAC7 445 aa4.57□□□□□ -1.68
CDHR3-206ENST00000468477 GOLGA6AQ9NYA3 693 aa4.57□□□□□ -1.68
CDHR3-206ENST00000468477 ZIM2Q9NZV7 527 aa4.57□□□□□ -1.68
CDHR3-206ENST00000468477 MCM8Q9UJA3 840 aa4.57□□□□□ -1.68
CDHR3-206ENST00000468477 NUB1Q9Y5A7 615 aa4.57□□□□□ -1.68
CDHR3-206ENST00000468477 FAM95CA0A1B0GW59 222 aa4.56□□□□□ -1.68
CDHR3-206ENST00000468477 BICDL2A1A5D9 508 aa4.56□□□□□ -1.68
CDHR3-206ENST00000468477 HIP1RO75146 1068 aa4.56□□□□□ -1.68
CDHR3-206ENST00000468477 RNASEH2AO75792 299 aaKnown RBP4.56□□□□□ -1.68
CDHR3-206ENST00000468477 TGFB1P01137 390 aa4.56□□□□□ -1.68
CDHR3-206ENST00000468477 POLR3DP05423 398 aaPredicted RBP4.56□□□□□ -1.68
CDHR3-206ENST00000468477 MYCLP1P12525 358 aaPredicted RBP4.56□□□□□ -1.68
CDHR3-206ENST00000468477 RRM1P23921 792 aa4.56□□□□□ -1.68
CDHR3-206ENST00000468477 MAP4P27816 1152 aaKnown RBP4.56□□□□□ -1.68
CDHR3-206ENST00000468477 CD97P48960 835 aa4.56□□□□□ -1.68
CDHR3-206ENST00000468477 GUCY2FP51841 1108 aa4.56□□□□□ -1.68
CDHR3-206ENST00000468477 PCDH1Q08174 1060 aa4.56□□□□□ -1.68
CDHR3-206ENST00000468477 NFKBIBQ15653 356 aa4.56□□□□□ -1.68
CDHR3-206ENST00000468477 CPSF6Q16630 551 aaKnown RBP eCLIP4.56□□□□□ -1.68
CDHR3-206ENST00000468477 CCDC93Q567U6 631 aa4.56□□□□□ -1.68
CDHR3-206ENST00000468477 PEAR1Q5VY43 1037 aaPredicted RBP4.56□□□□□ -1.68
CDHR3-206ENST00000468477 ANO1Q5XXA6 986 aa4.56□□□□□ -1.68
CDHR3-206ENST00000468477 ADAMTSL4Q6UY14 1074 aa4.56□□□□□ -1.68
CDHR3-206ENST00000468477 KIAA0825Q8IV33 1275 aa4.56□□□□□ -1.68
CDHR3-206ENST00000468477 SUGP1Q8IWZ8 645 aaKnown RBP4.56□□□□□ -1.68
CDHR3-206ENST00000468477 FTSJ3Q8IY81 847 aaKnown RBP4.56□□□□□ -1.68
CDHR3-206ENST00000468477 CPXCR1Q8N123 301 aa4.56□□□□□ -1.68
CDHR3-206ENST00000468477 ANKRD42Q8N9B4 389 aa4.56□□□□□ -1.68
CDHR3-206ENST00000468477 SMG8Q8ND04 991 aaKnown RBP4.56□□□□□ -1.68
CDHR3-206ENST00000468477 CSRNP1Q96S65 589 aa4.56□□□□□ -1.68
CDHR3-206ENST00000468477 METTL22Q9BUU2 404 aaPredicted RBP4.56□□□□□ -1.68
CDHR3-206ENST00000468477 OSBPL1AQ9BXW6 950 aa4.56□□□□□ -1.68
CDHR3-206ENST00000468477 TMPRSS13Q9BYE2 586 aa4.56□□□□□ -1.68
CDHR3-206ENST00000468477 LRRC27Q9C0I9 530 aa4.56□□□□□ -1.68
CDHR3-206ENST00000468477 ST7Q9NRC1 585 aa4.56□□□□□ -1.68
CDHR3-206ENST00000468477 GINM1Q9NU53 330 aa4.56□□□□□ -1.68
CDHR3-206ENST00000468477 ZNF69Q9UC07 566 aa4.56□□□□□ -1.68
CDHR3-206ENST00000468477 PRKAG3Q9UGI9 489 aa4.56□□□□□ -1.68
CDHR3-206ENST00000468477 HDAC9Q9UKV0 1011 aa4.56□□□□□ -1.68
CDHR3-206ENST00000468477 STRIP2Q9ULQ0 834 aa4.56□□□□□ -1.68
CDHR3-206ENST00000468477 NOB1Q9ULX3 412 aaKnown RBP4.56□□□□□ -1.68
CDHR3-206ENST00000468477 TRAK1Q9UPV9 953 aa4.56□□□□□ -1.68
CDHR3-206ENST00000468477 CD2APQ9Y5K6 639 aa4.56□□□□□ -1.68
CDHR3-206ENST00000468477 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.56□□□□□ -1.68
CDHR3-206ENST00000468477 LOC100289279A0A1B0GTE1 492 aa4.55□□□□□ -1.68
CDHR3-206ENST00000468477 TMEM238LA0A1B0GVL6 79 aa4.55□□□□□ -1.68
CDHR3-206ENST00000468477 A0A1W2PP55 124 aa4.55□□□□□ -1.68
CDHR3-206ENST00000468477 GOLIM4O00461 696 aa4.55□□□□□ -1.68
CDHR3-206ENST00000468477 TM4SF5O14894 197 aa4.55□□□□□ -1.68
CDHR3-206ENST00000468477 PDPK1O15530 556 aa4.55□□□□□ -1.68
CDHR3-206ENST00000468477 AKAP10O43572 662 aa4.55□□□□□ -1.68
CDHR3-206ENST00000468477 GADD45BO75293 160 aaPredicted RBP4.55□□□□□ -1.68
CDHR3-206ENST00000468477 TCEA3O75764 348 aa4.55□□□□□ -1.68
CDHR3-206ENST00000468477 MLC1Q15049 377 aa4.55□□□□□ -1.68
CDHR3-206ENST00000468477 POU4F3Q15319 338 aa4.55□□□□□ -1.68
CDHR3-206ENST00000468477 LONRF1Q17RB8 773 aa4.55□□□□□ -1.68
CDHR3-206ENST00000468477 FAM83BQ5T0W9 1011 aa4.55□□□□□ -1.68
CDHR3-206ENST00000468477 ERAP2Q6P179 960 aa4.55□□□□□ -1.68
CDHR3-206ENST00000468477 ERMP1Q7Z2K6 904 aa4.55□□□□□ -1.68
CDHR3-206ENST00000468477 CCNJLQ8IV13 435 aa4.55□□□□□ -1.68
CDHR3-206ENST00000468477 UBR7Q8N806 425 aa4.55□□□□□ -1.68
CDHR3-206ENST00000468477 ATL2Q8NHH9 583 aa4.55□□□□□ -1.68
CDHR3-206ENST00000468477 SHKBP1Q8TBC3 707 aa4.55□□□□□ -1.68
CDHR3-206ENST00000468477 ERP27Q96DN0 273 aa4.55□□□□□ -1.68
CDHR3-206ENST00000468477 TSPAN18Q96SJ8 248 aa4.55□□□□□ -1.68
CDHR3-206ENST00000468477 LATS2Q9NRM7 1088 aa4.55□□□□□ -1.68
CDHR3-206ENST00000468477 LUZP4Q9P127 313 aa4.55□□□□□ -1.68
CDHR3-206ENST00000468477 POLG2Q9UHN1 485 aa4.55□□□□□ -1.68
CDHR3-206ENST00000468477 PUF60Q9UHX1 559 aaKnown RBP4.55□□□□□ -1.68
CDHR3-206ENST00000468477 GTF2A1LQ9UNN4 478 aa4.55□□□□□ -1.68
CDHR3-206ENST00000468477 MSRB2Q9Y3D2 182 aa4.55□□□□□ -1.68
CDHR3-206ENST00000468477 TTC36A6NLP5 189 aa4.54□□□□□ -1.68
CDHR3-206ENST00000468477 WDR64B1ANS9 1081 aa4.54□□□□□ -1.68
CDHR3-206ENST00000468477 SMAD7O15105 426 aaKnown RBP4.54□□□□□ -1.68
CDHR3-206ENST00000468477 KATNA1O75449 491 aa4.54□□□□□ -1.68
CDHR3-206ENST00000468477 NBPF7P0C2Y1 421 aaPredicted RBP4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms