RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 FAM151AQ8WW52 585 aa9.6□□□□□ -0.87
BRCA1-208ENST00000468300 ZNF287Q9HBT7 754 aa9.6□□□□□ -0.87
BRCA1-208ENST00000468300 HDAC9Q9UKV0 1011 aa9.6□□□□□ -0.87
BRCA1-208ENST00000468300 PALM3A6NDB9 673 aaPredicted RBP9.6□□□□□ -0.87
BRCA1-208ENST00000468300 DDX11L8A8MPP1 907 aa9.6□□□□□ -0.87
BRCA1-208ENST00000468300 ADAMTS3O15072 1205 aa9.6□□□□□ -0.87
BRCA1-208ENST00000468300 PPP2R5BQ15173 497 aa9.6□□□□□ -0.87
BRCA1-208ENST00000468300 NPY5RQ15761 445 aa9.6□□□□□ -0.87
BRCA1-208ENST00000468300 ARHGAP27Q6ZUM4 889 aa9.6□□□□□ -0.87
BRCA1-208ENST00000468300 SAMD7Q7Z3H4 446 aa9.6□□□□□ -0.87
BRCA1-208ENST00000468300 MICALL2Q8IY33 904 aa9.6□□□□□ -0.87
BRCA1-208ENST00000468300 OGFOD1Q8N543 542 aa9.6□□□□□ -0.87
BRCA1-208ENST00000468300 FAM184AQ8NB25 1140 aa9.6□□□□□ -0.87
BRCA1-208ENST00000468300 SLC26A6Q9BXS9 759 aa9.6□□□□□ -0.87
BRCA1-208ENST00000468300 TMEM39BQ9GZU3 492 aa9.6□□□□□ -0.87
BRCA1-208ENST00000468300 PAPPA2Q9BXP8 1791 aa9.6□□□□□ -0.87
BRCA1-208ENST00000468300 CPLX1O14810 134 aa9.6□□□□□ -0.87
BRCA1-208ENST00000468300 GADD45BO75293 160 aaPredicted RBP9.6□□□□□ -0.87
BRCA1-208ENST00000468300 CALM1P0DP23 149 aa9.6□□□□□ -0.87
BRCA1-208ENST00000468300 CALM2P0DP24 149 aa9.6□□□□□ -0.87
BRCA1-208ENST00000468300 CALM3P0DP25 149 aa9.6□□□□□ -0.87
BRCA1-208ENST00000468300 SNHG28P0DPA3 235 aa9.6□□□□□ -0.87
BRCA1-208ENST00000468300 LMNB1P20700 586 aa9.6□□□□□ -0.87
BRCA1-208ENST00000468300 USP48Q86UV5 1035 aa9.6□□□□□ -0.87
BRCA1-208ENST00000468300 PRPF3O43395 683 aaKnown RBP9.59□□□□□ -0.87
BRCA1-208ENST00000468300 TRAK2O60296 914 aa9.59□□□□□ -0.87
BRCA1-208ENST00000468300 HLA-DOAP06340 250 aa9.59□□□□□ -0.87
BRCA1-208ENST00000468300 SYNE3Q6ZMZ3 975 aa9.59□□□□□ -0.87
BRCA1-208ENST00000468300 FAM83AQ86UY5 434 aa9.59□□□□□ -0.87
BRCA1-208ENST00000468300 FOXP4Q8IVH2 680 aaPredicted RBP9.59□□□□□ -0.87
BRCA1-208ENST00000468300 CCDC82Q8N4S0 544 aa9.59□□□□□ -0.87
BRCA1-208ENST00000468300 CHMP4CQ96CF2 233 aa9.59□□□□□ -0.87
BRCA1-208ENST00000468300 ALG1Q9BT22 464 aa9.59□□□□□ -0.87
BRCA1-208ENST00000468300 RNF26Q9BY78 433 aaPredicted RBP9.59□□□□□ -0.87
BRCA1-208ENST00000468300 RBM28Q9NW13 759 aaKnown RBP9.59□□□□□ -0.87
BRCA1-208ENST00000468300 CNOT7Q9UIV1 285 aaKnown RBP9.59□□□□□ -0.87
BRCA1-208ENST00000468300 hCG_1642624A0A1W2PR95 340 aa9.59□□□□□ -0.87
BRCA1-208ENST00000468300 PRPF40AO75400 957 aaKnown RBP9.59□□□□□ -0.87
BRCA1-208ENST00000468300 CDKL5O76039 1030 aa9.59□□□□□ -0.87
BRCA1-208ENST00000468300 MMP14P50281 582 aa9.59□□□□□ -0.87
BRCA1-208ENST00000468300 KIF23Q02241 960 aaPredicted RBP9.59□□□□□ -0.87
BRCA1-208ENST00000468300 SSRP1Q08945 709 aaKnown RBP9.59□□□□□ -0.87
BRCA1-208ENST00000468300 CCDC178Q5BJE1 867 aa9.59□□□□□ -0.87
BRCA1-208ENST00000468300 KAT14Q9H8E8 782 aa9.59□□□□□ -0.87
BRCA1-208ENST00000468300 HIRAP54198 1017 aaPredicted RBP9.58□□□□□ -0.88
BRCA1-208ENST00000468300 KRT40Q6A162 431 aa9.58□□□□□ -0.88
BRCA1-208ENST00000468300 C8orf76Q96K31 380 aa9.58□□□□□ -0.88
BRCA1-208ENST00000468300 CSRNP1Q96S65 589 aa9.58□□□□□ -0.88
BRCA1-208ENST00000468300 FTOQ9C0B1 505 aaKnown RBP eCLIP9.58□□□□□ -0.88
BRCA1-208ENST00000468300 STX8Q9UNK0 236 aa9.58□□□□□ -0.88
BRCA1-208ENST00000468300 TOP1P11387 765 aaKnown RBP9.58□□□□□ -0.88
BRCA1-208ENST00000468300 BAZ2BQ9UIF8 2168 aaKnown RBP9.58□□□□□ -0.88
BRCA1-208ENST00000468300 CCDC196A0A1B0GTZ2 297 aa9.58□□□□□ -0.88
BRCA1-208ENST00000468300 USP17L5A8MUK1 530 aa9.58□□□□□ -0.88
BRCA1-208ENST00000468300 PHF20L1A8MW92 1017 aa9.58□□□□□ -0.88
BRCA1-208ENST00000468300 TBC1D12O60347 775 aa9.58□□□□□ -0.88
BRCA1-208ENST00000468300 PDHBP11177 359 aa9.58□□□□□ -0.88
BRCA1-208ENST00000468300 U2AF2P26368 475 aaKnown RBP eCLIP9.58□□□□□ -0.881e-6■■■□□ 19.1
BRCA1-208ENST00000468300 EIF6P56537 245 aaKnown RBP9.58□□□□□ -0.88
BRCA1-208ENST00000468300 GPC2Q8N158 579 aa9.58□□□□□ -0.88
BRCA1-208ENST00000468300 TRPM4Q8TD43 1214 aa9.58□□□□□ -0.88
BRCA1-208ENST00000468300 MKL1Q969V6 931 aa9.58□□□□□ -0.88
BRCA1-208ENST00000468300 ZSCAN16Q9H4T2 348 aaPredicted RBP9.58□□□□□ -0.88
BRCA1-208ENST00000468300 GJA3Q9Y6H8 435 aa9.58□□□□□ -0.88
BRCA1-208ENST00000468300 V9GY48 417 aaPredicted RBP9.58□□□□□ -0.88
BRCA1-208ENST00000468300 PHIPQ8WWQ0 1821 aa9.57□□□□□ -0.88
BRCA1-208ENST00000468300 CLGNO14967 610 aa9.57□□□□□ -0.88
BRCA1-208ENST00000468300 DEXIO95424 95 aa9.57□□□□□ -0.88
BRCA1-208ENST00000468300 GOLGA8HP0CJ92 632 aa9.57□□□□□ -0.88
BRCA1-208ENST00000468300 MAPK8IP2Q13387 824 aaPredicted RBP9.57□□□□□ -0.88
BRCA1-208ENST00000468300 CERKLQ49MI3 558 aaPredicted RBP9.57□□□□□ -0.88
BRCA1-208ENST00000468300 TBC1D10BQ4KMP7 808 aaPredicted RBP9.57□□□□□ -0.88
BRCA1-208ENST00000468300 USP17L2Q6R6M4 530 aa9.57□□□□□ -0.88
BRCA1-208ENST00000468300 CPVLQ9H3G5 476 aa9.57□□□□□ -0.88
BRCA1-208ENST00000468300 GPRC5DQ9NZD1 345 aa9.57□□□□□ -0.88
BRCA1-208ENST00000468300 POLR2AP24928 1970 aaKnown RBP9.57□□□□□ -0.88
BRCA1-208ENST00000468300 SSC5DA1L4H1 1573 aa9.57□□□□□ -0.88
BRCA1-208ENST00000468300 H3BQV1 296 aa9.57□□□□□ -0.88
BRCA1-208ENST00000468300 GDF11O95390 407 aa9.57□□□□□ -0.88
BRCA1-208ENST00000468300 TTLL1O95922 423 aa9.57□□□□□ -0.88
BRCA1-208ENST00000468300 MMP1P03956 469 aa9.57□□□□□ -0.88
BRCA1-208ENST00000468300 IFFO2Q5TF58 517 aa9.57□□□□□ -0.88
BRCA1-208ENST00000468300 ZSCAN29Q8IWY8 852 aaPredicted RBP9.57□□□□□ -0.88
BRCA1-208ENST00000468300 LRRC47Q8N1G4 583 aaKnown RBP9.57□□□□□ -0.88
BRCA1-208ENST00000468300 CCDC17Q96LX7 622 aa9.57□□□□□ -0.88
BRCA1-208ENST00000468300 PHF20Q9BVI0 1012 aa9.57□□□□□ -0.88
BRCA1-208ENST00000468300 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.57□□□□□ -0.88
BRCA1-208ENST00000468300 KCNJ14Q9UNX9 436 aa9.57□□□□□ -0.88
BRCA1-208ENST00000468300 SEPT2Q15019 361 aa9.57□□□□□ -0.88
BRCA1-208ENST00000468300 TYW1BQ6NUM6 668 aa9.57□□□□□ -0.88
BRCA1-208ENST00000468300 OXER1Q8TDS5 423 aa9.57□□□□□ -0.88
BRCA1-208ENST00000468300 TNFRSF25Q93038 417 aa9.57□□□□□ -0.88
BRCA1-208ENST00000468300 VEZTQ9HBM0 779 aa9.57□□□□□ -0.88
BRCA1-208ENST00000468300 TFIP11Q9UBB9 837 aaKnown RBP9.57□□□□□ -0.88
BRCA1-208ENST00000468300 CLIP2Q9UDT6 1046 aa9.57□□□□□ -0.88
BRCA1-208ENST00000468300 HERC5Q9UII4 1024 aaKnown RBP9.57□□□□□ -0.88
BRCA1-208ENST00000468300 HACL1Q9UJ83 578 aa9.57□□□□□ -0.88
BRCA1-208ENST00000468300 A0A1W2PRG0 241 aa9.56□□□□□ -0.88
BRCA1-208ENST00000468300 EEF2P13639 858 aaKnown RBP9.56□□□□□ -0.88
BRCA1-208ENST00000468300 EPS15P42566 896 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms