RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 KIF22Q14807 665 aa23.7■■□□□ 1.38
NPHP4-206ENST00000468253 ZYXQ15942 572 aaKnown RBP23.7■■□□□ 1.38
NPHP4-206ENST00000468253 KIAA1211Q6ZU35 1233 aa23.7■■□□□ 1.38
NPHP4-206ENST00000468253 CEP95Q96GE4 821 aa23.7■■□□□ 1.38
NPHP4-206ENST00000468253 ESYT1Q9BSJ8 1104 aa23.7■■□□□ 1.38
NPHP4-206ENST00000468253 NBPF3Q9H094 633 aa23.7■■□□□ 1.38
NPHP4-206ENST00000468253 GOPCQ9HD26 462 aa23.7■■□□□ 1.38
NPHP4-206ENST00000468253 CLIP2Q9UDT6 1046 aa23.7■■□□□ 1.38
NPHP4-206ENST00000468253 ATAD5Q96QE3 1844 aa23.69■■□□□ 1.38
NPHP4-206ENST00000468253 LACTBP83111 547 aaPredicted RBP23.69■■□□□ 1.38
NPHP4-206ENST00000468253 ATP2B2Q01814 1243 aa23.69■■□□□ 1.38
NPHP4-206ENST00000468253 PTH1RQ03431 593 aa23.69■■□□□ 1.38
NPHP4-206ENST00000468253 CASC1Q6TDU7 716 aa23.69■■□□□ 1.38
NPHP4-206ENST00000468253 LBX2Q6XYB7 198 aa23.69■■□□□ 1.38
NPHP4-206ENST00000468253 CLEC10AQ8IUN9 316 aa23.69■■□□□ 1.38
NPHP4-206ENST00000468253 WDR46O15213 610 aaKnown RBP23.68■■□□□ 1.38
NPHP4-206ENST00000468253 HERVK_113P62684 666 aa23.68■■□□□ 1.38
NPHP4-206ENST00000468253 COG2Q14746 738 aa23.68■■□□□ 1.38
NPHP4-206ENST00000468253 FAM110CQ1W6H9 321 aa23.68■■□□□ 1.38
NPHP4-206ENST00000468253 TNS4Q8IZW8 715 aa23.68■■□□□ 1.38
NPHP4-206ENST00000468253 CD99L2Q8TCZ2 262 aa23.68■■□□□ 1.38
NPHP4-206ENST00000468253 TTC14Q96N46 770 aa23.68■■□□□ 1.38
NPHP4-206ENST00000468253 RPAP3Q9H6T3 665 aaPredicted RBP23.68■■□□□ 1.38
NPHP4-206ENST00000468253 EFCC1Q9HA90 598 aa23.68■■□□□ 1.38
NPHP4-206ENST00000468253 IL17RBQ9NRM6 502 aa23.68■■□□□ 1.38
NPHP4-206ENST00000468253 MORF4L1Q9UBU8 362 aa23.68■■□□□ 1.38
NPHP4-206ENST00000468253 CASP8AP2Q9UKL3 1982 aa23.67■■□□□ 1.38
NPHP4-206ENST00000468253 F5H6K3 240 aa23.67■■□□□ 1.38
NPHP4-206ENST00000468253 CDC45O75419 566 aa23.67■■□□□ 1.38
NPHP4-206ENST00000468253 KLRC3Q07444 240 aa23.67■■□□□ 1.38
NPHP4-206ENST00000468253 KIAA1755Q5JYT7 1200 aa23.67■■□□□ 1.38
NPHP4-206ENST00000468253 TBC1D10CQ8IV04 446 aa23.67■■□□□ 1.38
NPHP4-206ENST00000468253 ESR2Q92731 530 aa23.67■■□□□ 1.38
NPHP4-206ENST00000468253 CCDC178Q5BJE1 867 aa23.66■■□□□ 1.38
NPHP4-206ENST00000468253 OTOP1Q7RTM1 612 aa23.66■■□□□ 1.38
NPHP4-206ENST00000468253 GMCL1P1Q8NEA9 526 aa23.66■■□□□ 1.38
NPHP4-206ENST00000468253 CNNM2Q9H8M5 875 aa23.66■■□□□ 1.38
NPHP4-206ENST00000468253 TOMM22Q9NS69 142 aa23.66■■□□□ 1.38
NPHP4-206ENST00000468253 RBPJLQ9UBG7 517 aa23.66■■□□□ 1.38
NPHP4-206ENST00000468253 PTPRFP10586 1907 aa23.66■■□□□ 1.38
NPHP4-206ENST00000468253 PRMT2P55345 433 aa23.65■■□□□ 1.38
NPHP4-206ENST00000468253 RRP12Q5JTH9 1297 aaKnown RBP23.65■■□□□ 1.38
NPHP4-206ENST00000468253 ANKRD13CQ8N6S4 541 aa23.65■■□□□ 1.38
NPHP4-206ENST00000468253 KRT23Q9C075 422 aa23.65■■□□□ 1.38
NPHP4-206ENST00000468253 MCOLN1Q9GZU1 580 aa23.65■■□□□ 1.38
NPHP4-206ENST00000468253 LSG1Q9H089 658 aaKnown RBP23.65■■□□□ 1.38
NPHP4-206ENST00000468253 RABGAP1Q9Y3P9 1069 aa23.65■■□□□ 1.38
NPHP4-206ENST00000468253 MYPNQ86TC9 1320 aa23.64■■□□□ 1.38
NPHP4-206ENST00000468253 HOXD10P28358 340 aa23.64■■□□□ 1.37
NPHP4-206ENST00000468253 PSMC4P43686 418 aa23.64■■□□□ 1.37
NPHP4-206ENST00000468253 GPRC5AQ8NFJ5 357 aa23.64■■□□□ 1.37
NPHP4-206ENST00000468253 TRIM17Q9Y577 477 aa23.64■■□□□ 1.37
NPHP4-206ENST00000468253 DSG3P32926 999 aa23.63■■□□□ 1.37
NPHP4-206ENST00000468253 FBXO46Q6PJ61 603 aaPredicted RBP23.63■■□□□ 1.37
NPHP4-206ENST00000468253 SPICE1Q8N0Z3 855 aa23.63■■□□□ 1.37
NPHP4-206ENST00000468253 LOC285556D6RIA3 1793 aa23.63■■□□□ 1.37
NPHP4-206ENST00000468253 NDUFB10O96000 172 aa23.62■■□□□ 1.37
NPHP4-206ENST00000468253 CYP21A2P08686 494 aa23.62■■□□□ 1.37
NPHP4-206ENST00000468253 FCGRTP55899 365 aa23.62■■□□□ 1.37
NPHP4-206ENST00000468253 CAP1Q01518 475 aa23.62■■□□□ 1.37
NPHP4-206ENST00000468253 POTEEQ6S8J3 1075 aa23.62■■□□□ 1.37
NPHP4-206ENST00000468253 DGKHQ86XP1 1220 aa23.62■■□□□ 1.37
NPHP4-206ENST00000468253 MB21D1Q8N884 522 aa23.62■■□□□ 1.37
NPHP4-206ENST00000468253 ANKS1AQ92625 1134 aa23.62■■□□□ 1.37
NPHP4-206ENST00000468253 TRIM47Q96LD4 638 aa23.62■■□□□ 1.37
NPHP4-206ENST00000468253 TANGO6Q9C0B7 1094 aa23.62■■□□□ 1.37
NPHP4-206ENST00000468253 ZSWIM5Q9P217 1185 aa23.62■■□□□ 1.37
NPHP4-206ENST00000468253 ADAMTS5Q9UNA0 930 aa23.62■■□□□ 1.37
NPHP4-206ENST00000468253 STX8Q9UNK0 236 aa23.62■■□□□ 1.37
NPHP4-206ENST00000468253 FMNL1O95466 1100 aaPredicted RBP23.61■■□□□ 1.37
NPHP4-206ENST00000468253 TOP1P11387 765 aaKnown RBP23.61■■□□□ 1.37
NPHP4-206ENST00000468253 IQCA1Q86XH1 822 aa23.61■■□□□ 1.37
NPHP4-206ENST00000468253 GMCL1Q96IK5 515 aa23.61■■□□□ 1.37
NPHP4-206ENST00000468253 TXNRD2Q9NNW7 524 aa23.61■■□□□ 1.37
NPHP4-206ENST00000468253 PTPN22Q9Y2R2 807 aa23.61■■□□□ 1.37
NPHP4-206ENST00000468253 RBM8AQ9Y5S9 174 aaKnown RBP23.61■■□□□ 1.37
NPHP4-206ENST00000468253 SPDYE16A6NNV3 312 aaPredicted RBP23.6■■□□□ 1.37
NPHP4-206ENST00000468253 NMT2O60551 498 aa23.6■■□□□ 1.37
NPHP4-206ENST00000468253 CTGFP29279 349 aa23.6■■□□□ 1.37
NPHP4-206ENST00000468253 ERVK-9P63128 1117 aa23.6■■□□□ 1.37
NPHP4-206ENST00000468253 ERVK-24P63145 666 aa23.6■■□□□ 1.37
NPHP4-206ENST00000468253 TRDNQ13061 729 aa23.6■■□□□ 1.37
NPHP4-206ENST00000468253 Q3C1V9 767 aa23.6■■□□□ 1.37
NPHP4-206ENST00000468253 SLFN13Q68D06 897 aa23.6■■□□□ 1.37
NPHP4-206ENST00000468253 ARHGAP39Q9C0H5 1083 aa23.6■■□□□ 1.37
NPHP4-206ENST00000468253 NEDD4P46934 1319 aa23.59■■□□□ 1.37
NPHP4-206ENST00000468253 KDM4AO75164 1064 aa23.59■■□□□ 1.37
NPHP4-206ENST00000468253 FLOT1O75955 427 aa23.59■■□□□ 1.37
NPHP4-206ENST00000468253 NECTIN1Q15223 517 aa23.59■■□□□ 1.37
NPHP4-206ENST00000468253 FAM83BQ5T0W9 1011 aa23.59■■□□□ 1.37
NPHP4-206ENST00000468253 ANO2Q9NQ90 1003 aa23.59■■□□□ 1.37
NPHP4-206ENST00000468253 SRRDQ9UH36 339 aa23.59■■□□□ 1.37
NPHP4-206ENST00000468253 GREB1LQ9C091 1923 aaPredicted RBP23.59■■□□□ 1.37
NPHP4-206ENST00000468253 B4E1Z4 1266 aa23.58■■□□□ 1.37
NPHP4-206ENST00000468253 PLA2G6O60733 806 aa23.58■■□□□ 1.37
NPHP4-206ENST00000468253 CCNA1P78396 465 aa23.58■■□□□ 1.37
NPHP4-206ENST00000468253 RCSD1Q6JBY9 416 aa23.58■■□□□ 1.37
NPHP4-206ENST00000468253 LRRC47Q8N1G4 583 aaKnown RBP23.58■■□□□ 1.37
NPHP4-206ENST00000468253 PRPF38AQ8NAV1 312 aaKnown RBP23.58■■□□□ 1.37
NPHP4-206ENST00000468253 TMEM47Q9BQJ4 181 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms