RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 TANGO6Q9C0B7 1094 aa20.86■□□□□ 0.93
TRIM56-203ENST00000467847 FLRT1Q9NZU1 646 aa20.86■□□□□ 0.93
TRIM56-203ENST00000467847 MYH7P12883 1935 aa20.86■□□□□ 0.93
TRIM56-203ENST00000467847 A0A1W2PRG0 241 aa20.85■□□□□ 0.93
TRIM56-203ENST00000467847 COL6A1P12109 1028 aa20.85■□□□□ 0.93
TRIM56-203ENST00000467847 ATP2B2Q01814 1243 aa20.85■□□□□ 0.93
TRIM56-203ENST00000467847 GRB14Q14449 540 aa20.85■□□□□ 0.93
TRIM56-203ENST00000467847 TMEM179Q6ZVK1 233 aa20.85■□□□□ 0.93
TRIM56-203ENST00000467847 SLC44A5Q8NCS7 719 aa20.85■□□□□ 0.93
TRIM56-203ENST00000467847 BOLA2Q9H3K6 86 aa20.85■□□□□ 0.93
TRIM56-203ENST00000467847 SWAP70Q9UH65 585 aa20.85■□□□□ 0.93
TRIM56-203ENST00000467847 STXBP5LQ9Y2K9 1186 aa20.85■□□□□ 0.93
TRIM56-203ENST00000467847 MBD4O95243 580 aa20.84■□□□□ 0.93
TRIM56-203ENST00000467847 ADD2P35612 726 aa20.84■□□□□ 0.93
TRIM56-203ENST00000467847 COG2Q14746 738 aa20.84■□□□□ 0.93
TRIM56-203ENST00000467847 Q7L0L9 218 aa20.84■□□□□ 0.93
TRIM56-203ENST00000467847 DYNLL2Q96FJ2 89 aa20.84■□□□□ 0.93
TRIM56-203ENST00000467847 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.84■□□□□ 0.93
TRIM56-203ENST00000467847 CHMP4BQ9H444 224 aaKnown RBP20.84■□□□□ 0.93
TRIM56-203ENST00000467847 HOXC10Q9NYD6 342 aa20.84■□□□□ 0.93
TRIM56-203ENST00000467847 RLFQ13129 1914 aa20.84■□□□□ 0.93
TRIM56-203ENST00000467847 PRKAB2O43741 272 aa20.83■□□□□ 0.93
TRIM56-203ENST00000467847 HOXC6P09630 235 aa20.83■□□□□ 0.93
TRIM56-203ENST00000467847 ATP5JP18859 108 aa20.83■□□□□ 0.93
TRIM56-203ENST00000467847 MAGEA10P43363 369 aaPredicted RBP20.83■□□□□ 0.93
TRIM56-203ENST00000467847 SLFNL1Q499Z3 407 aa20.83■□□□□ 0.93
TRIM56-203ENST00000467847 ATP8A2Q9NTI2 1148 aa20.83■□□□□ 0.93
TRIM56-203ENST00000467847 A0A0G2JMZ2 1700 aa20.83■□□□□ 0.92
TRIM56-203ENST00000467847 DNAH12Q6ZR08 3092 aa20.82■□□□□ 0.92
TRIM56-203ENST00000467847 CNGA1P29973 690 aa20.82■□□□□ 0.92
TRIM56-203ENST00000467847 NPLOC4Q8TAT6 608 aa20.82■□□□□ 0.92
TRIM56-203ENST00000467847 HAUS7Q99871 368 aa20.82■□□□□ 0.92
TRIM56-203ENST00000467847 MOV10L1Q9BXT6 1211 aaKnown RBP20.82■□□□□ 0.92
TRIM56-203ENST00000467847 ARHGEF10LQ9HCE6 1279 aa20.82■□□□□ 0.92
TRIM56-203ENST00000467847 ZNF236Q9UL36 1845 aa20.82■□□□□ 0.92
TRIM56-203ENST00000467847 CYP2C19P33261 490 aa20.81■□□□□ 0.92
TRIM56-203ENST00000467847 ICA1Q05084 483 aa20.81■□□□□ 0.92
TRIM56-203ENST00000467847 LRRC26Q2I0M4 334 aa20.81■□□□□ 0.92
TRIM56-203ENST00000467847 KIAA1755Q5JYT7 1200 aa20.81■□□□□ 0.92
TRIM56-203ENST00000467847 DPP9Q86TI2 863 aa20.81■□□□□ 0.92
TRIM56-203ENST00000467847 CLEC10AQ8IUN9 316 aa20.81■□□□□ 0.92
TRIM56-203ENST00000467847 AMOTL1Q8IY63 956 aa20.81■□□□□ 0.92
TRIM56-203ENST00000467847 LPAR1Q92633 364 aa20.81■□□□□ 0.92
TRIM56-203ENST00000467847 SPATC1LQ9H0A9 340 aa20.81■□□□□ 0.92
TRIM56-203ENST00000467847 SH2D4AQ9H788 454 aa20.81■□□□□ 0.92
TRIM56-203ENST00000467847 DDX20Q9UHI6 824 aaKnown RBP20.81■□□□□ 0.92
TRIM56-203ENST00000467847 MSCO60682 206 aa20.8■□□□□ 0.92
TRIM56-203ENST00000467847 AKR1B1P15121 316 aa20.8■□□□□ 0.92
TRIM56-203ENST00000467847 ADORA2AP29274 412 aa20.8■□□□□ 0.92
TRIM56-203ENST00000467847 LRIT3Q3SXY7 679 aa20.8■□□□□ 0.92
TRIM56-203ENST00000467847 TDHQ8IZJ6 230 aa20.8■□□□□ 0.92
TRIM56-203ENST00000467847 SPICE1Q8N0Z3 855 aa20.8■□□□□ 0.92
TRIM56-203ENST00000467847 MB21D1Q8N884 522 aa20.8■□□□□ 0.92
TRIM56-203ENST00000467847 DDRGK1Q96HY6 314 aa20.8■□□□□ 0.92
TRIM56-203ENST00000467847 RCAN3Q9UKA8 241 aa20.8■□□□□ 0.92
TRIM56-203ENST00000467847 PARP14Q460N5 1801 aa20.79■□□□□ 0.92
TRIM56-203ENST00000467847 CYP2D7A0A087X1C5 515 aa20.79■□□□□ 0.92
TRIM56-203ENST00000467847 STRNO43815 780 aa20.79■□□□□ 0.92
TRIM56-203ENST00000467847 FLOT1O75955 427 aa20.79■□□□□ 0.92
TRIM56-203ENST00000467847 ERCC3P19447 782 aa20.79■□□□□ 0.92
TRIM56-203ENST00000467847 PLS1Q14651 629 aa20.79■□□□□ 0.92
TRIM56-203ENST00000467847 C12orf60Q5U649 245 aa20.79■□□□□ 0.92
TRIM56-203ENST00000467847 SIAH1Q8IUQ4 282 aa20.79■□□□□ 0.92
TRIM56-203ENST00000467847 SHCBP1Q8NEM2 672 aa20.79■□□□□ 0.92
TRIM56-203ENST00000467847 CCDC17Q96LX7 622 aa20.79■□□□□ 0.92
TRIM56-203ENST00000467847 UBE2OQ9C0C9 1292 aaKnown RBP20.79■□□□□ 0.92
TRIM56-203ENST00000467847 MTMR10Q9NXD2 777 aa20.79■□□□□ 0.92
TRIM56-203ENST00000467847 TMX2Q9Y320 296 aa20.79■□□□□ 0.92
TRIM56-203ENST00000467847 USP17L12C9JPN9 530 aa20.78■□□□□ 0.92
TRIM56-203ENST00000467847 USP17L21D6R901 530 aa20.78■□□□□ 0.92
TRIM56-203ENST00000467847 CHGBP05060 677 aa20.78■□□□□ 0.92
TRIM56-203ENST00000467847 DSG3P32926 999 aa20.78■□□□□ 0.92
TRIM56-203ENST00000467847 CDK8P49336 464 aa20.78■□□□□ 0.92
TRIM56-203ENST00000467847 UBE3CQ15386 1083 aa20.78■□□□□ 0.92
TRIM56-203ENST00000467847 TRPV1Q8NER1 839 aa20.78■□□□□ 0.92
TRIM56-203ENST00000467847 LRRCC1Q9C099 1032 aa20.78■□□□□ 0.92
TRIM56-203ENST00000467847 SENP6Q9GZR1 1112 aaPredicted RBP20.78■□□□□ 0.92
TRIM56-203ENST00000467847 VCPKMTQ9H867 229 aa20.78■□□□□ 0.92
TRIM56-203ENST00000467847 SMIM22K7EJ46 135 aa20.77■□□□□ 0.92
TRIM56-203ENST00000467847 CYBAP13498 195 aa20.77■□□□□ 0.92
TRIM56-203ENST00000467847 OLFML2BQ68BL8 750 aa20.77■□□□□ 0.92
TRIM56-203ENST00000467847 ZSCAN25Q6NSZ9 544 aa20.77■□□□□ 0.92
TRIM56-203ENST00000467847 SAMD1Q6SPF0 538 aaPredicted RBP20.77■□□□□ 0.92
TRIM56-203ENST00000467847 C16orf86Q6ZW13 317 aa20.77■□□□□ 0.92
TRIM56-203ENST00000467847 ATG4CQ96DT6 458 aa20.77■□□□□ 0.92
TRIM56-203ENST00000467847 MROH8Q9H579 483 aa20.77■□□□□ 0.92
TRIM56-203ENST00000467847 SLC4A4Q9Y6R1 1079 aa20.77■□□□□ 0.92
TRIM56-203ENST00000467847 COL11A1P12107 1806 aaPredicted RBP20.76■□□□□ 0.91
TRIM56-203ENST00000467847 DNM1LO00429 736 aa20.76■□□□□ 0.91
TRIM56-203ENST00000467847 IGHA2P01877 340 aa20.76■□□□□ 0.91
TRIM56-203ENST00000467847 NCAPG2Q86XI2 1143 aa20.76■□□□□ 0.91
TRIM56-203ENST00000467847 COL25A1Q9BXS0 654 aaPredicted RBP20.76■□□□□ 0.91
TRIM56-203ENST00000467847 SLC5A4Q9NY91 659 aa20.76■□□□□ 0.91
TRIM56-203ENST00000467847 ZNFX1Q9P2E3 1918 aaKnown RBP20.76■□□□□ 0.91
TRIM56-203ENST00000467847 WDR46O15213 610 aaKnown RBP20.75■□□□□ 0.91
TRIM56-203ENST00000467847 SMARCA5O60264 1052 aaPredicted RBP20.75■□□□□ 0.91
TRIM56-203ENST00000467847 COBLO75128 1261 aa20.75■□□□□ 0.91
TRIM56-203ENST00000467847 C20orf194Q5TEA3 1177 aa20.75■□□□□ 0.91
TRIM56-203ENST00000467847 EEF2P13639 858 aaKnown RBP20.74■□□□□ 0.91
TRIM56-203ENST00000467847 ATN1P54259 1190 aaPredicted RBP20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms