RNA–Protein interactions for RNA: ENST00000467563.3

CHRNA4-203, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,098 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-203ENST00000467563 SPDYE2Q495Y8 402 aa21.71■■□□□ 1.07
CHRNA4-203ENST00000467563 METTL16Q86W50 562 aaKnown RBP21.71■■□□□ 1.07
CHRNA4-203ENST00000467563 MTMR14Q8NCE2 650 aa21.71■■□□□ 1.07
CHRNA4-203ENST00000467563 PIBF1Q8WXW3 757 aa21.71■■□□□ 1.07
CHRNA4-203ENST00000467563 TMOD2Q9NZR1 351 aa21.71■■□□□ 1.07
CHRNA4-203ENST00000467563 GOLGA8HP0CJ92 632 aa21.7■■□□□ 1.06
CHRNA4-203ENST00000467563 GNAQP50148 359 aa21.7■■□□□ 1.06
CHRNA4-203ENST00000467563 SAFBQ15424 915 aaKnown RBP eCLIP21.7■■□□□ 1.06
CHRNA4-203ENST00000467563 FOXP4Q8IVH2 680 aaPredicted RBP21.7■■□□□ 1.06
CHRNA4-203ENST00000467563 CCDC17Q96LX7 622 aa21.7■■□□□ 1.06
CHRNA4-203ENST00000467563 SPON1Q9HCB6 807 aa21.7■■□□□ 1.06
CHRNA4-203ENST00000467563 POLR3EQ9NVU0 708 aa21.7■■□□□ 1.06
CHRNA4-203ENST00000467563 COL2A1P02458 1487 aaPredicted RBP21.7■■□□□ 1.06
CHRNA4-203ENST00000467563 MPHOSPH10O00566 681 aaKnown RBP21.7■■□□□ 1.06
CHRNA4-203ENST00000467563 TNIP1Q15025 636 aa21.7■■□□□ 1.06
CHRNA4-203ENST00000467563 SHROOM1Q2M3G4 852 aaPredicted RBP21.7■■□□□ 1.06
CHRNA4-203ENST00000467563 TATDN1Q6P1N9 297 aa21.7■■□□□ 1.06
CHRNA4-203ENST00000467563 NOSTRINQ8IVI9 506 aa21.7■■□□□ 1.06
CHRNA4-203ENST00000467563 SYAP1Q96A49 352 aaPredicted RBP21.7■■□□□ 1.06
CHRNA4-203ENST00000467563 ZBED3Q96IU2 234 aaPredicted RBP21.7■■□□□ 1.06
CHRNA4-203ENST00000467563 GREB1LQ9C091 1923 aaPredicted RBP21.69■■□□□ 1.06
CHRNA4-203ENST00000467563 GOLGA6L4A6NEF3 574 aa21.69■■□□□ 1.06
CHRNA4-203ENST00000467563 GOLGA6L3A6NEY3 463 aa21.69■■□□□ 1.06
CHRNA4-203ENST00000467563 CYTH3O43739 400 aa21.69■■□□□ 1.06
CHRNA4-203ENST00000467563 TTLL1O95922 423 aa21.69■■□□□ 1.06
CHRNA4-203ENST00000467563 SCG2P13521 617 aa21.69■■□□□ 1.06
CHRNA4-203ENST00000467563 LIG1P18858 919 aa21.69■■□□□ 1.06
CHRNA4-203ENST00000467563 USP17L2Q6R6M4 530 aa21.69■■□□□ 1.06
CHRNA4-203ENST00000467563 LRRC47Q8N1G4 583 aaKnown RBP21.69■■□□□ 1.06
CHRNA4-203ENST00000467563 LINC00301Q8NCQ3 95 aa21.69■■□□□ 1.06
CHRNA4-203ENST00000467563 OXER1Q8TDS5 423 aa21.69■■□□□ 1.06
CHRNA4-203ENST00000467563 PHF20Q9BVI0 1012 aa21.69■■□□□ 1.06
CHRNA4-203ENST00000467563 FOXP1Q9H334 677 aaPredicted RBP21.69■■□□□ 1.06
CHRNA4-203ENST00000467563 CLIP2Q9UDT6 1046 aa21.69■■□□□ 1.06
CHRNA4-203ENST00000467563 SYCE3A1L190 88 aa21.68■■□□□ 1.06
CHRNA4-203ENST00000467563 XBP1P17861 261 aa21.68■■□□□ 1.06
CHRNA4-203ENST00000467563 NASPP49321 788 aaPredicted RBP21.68■■□□□ 1.06
CHRNA4-203ENST00000467563 NR5A1Q13285 461 aa21.68■■□□□ 1.06
CHRNA4-203ENST00000467563 PFKFB3Q16875 520 aaPredicted RBP21.68■■□□□ 1.06
CHRNA4-203ENST00000467563 CERKLQ49MI3 558 aaPredicted RBP21.68■■□□□ 1.06
CHRNA4-203ENST00000467563 CSRNP1Q96S65 589 aa21.68■■□□□ 1.06
CHRNA4-203ENST00000467563 ARFGEF1Q9Y6D6 1849 aa21.68■■□□□ 1.06
CHRNA4-203ENST00000467563 CNTNAP1P78357 1384 aa21.68■■□□□ 1.06
CHRNA4-203ENST00000467563 USP17L5A8MUK1 530 aa21.68■■□□□ 1.06
CHRNA4-203ENST00000467563 KLRF2D3W0D1 207 aa21.68■■□□□ 1.06
CHRNA4-203ENST00000467563 PARP1P09874 1014 aaKnown RBP21.68■■□□□ 1.06
CHRNA4-203ENST00000467563 TRIM34Q9BYJ4 488 aa21.68■■□□□ 1.06
CHRNA4-203ENST00000467563 ANO1Q5XXA6 986 aa21.67■■□□□ 1.06
CHRNA4-203ENST00000467563 CPVLQ9H3G5 476 aa21.67■■□□□ 1.06
CHRNA4-203ENST00000467563 MYOZ2Q9NPC6 264 aa21.67■■□□□ 1.06
CHRNA4-203ENST00000467563 FZD9O00144 591 aa21.67■■□□□ 1.06
CHRNA4-203ENST00000467563 WNT10BO00744 389 aa21.67■■□□□ 1.06
CHRNA4-203ENST00000467563 YEATS4O95619 227 aa21.67■■□□□ 1.06
CHRNA4-203ENST00000467563 PDHBP11177 359 aa21.67■■□□□ 1.06
CHRNA4-203ENST00000467563 NPY5RQ15761 445 aa21.67■■□□□ 1.06
CHRNA4-203ENST00000467563 NBPF9Q3BBW0 867 aa21.67■■□□□ 1.06
CHRNA4-203ENST00000467563 CCDC183Q5T5S1 534 aa21.67■■□□□ 1.06
CHRNA4-203ENST00000467563 FAM151AQ8WW52 585 aa21.67■■□□□ 1.06
CHRNA4-203ENST00000467563 LZTS2Q9BRK4 669 aa21.67■■□□□ 1.06
CHRNA4-203ENST00000467563 VEZTQ9HBM0 779 aa21.67■■□□□ 1.06
CHRNA4-203ENST00000467563 STK38Q15208 465 aa21.66■■□□□ 1.06
CHRNA4-203ENST00000467563 BICD2Q8TD16 824 aa21.66■■□□□ 1.06
CHRNA4-203ENST00000467563 ME1P48163 572 aa21.65■■□□□ 1.06
CHRNA4-203ENST00000467563 FKBP1CQ5VVH2 108 aa21.65■■□□□ 1.06
CHRNA4-203ENST00000467563 EGFRP00533 1210 aa21.65■■□□□ 1.06
CHRNA4-203ENST00000467563 SNHG28P0DPA3 235 aa21.65■■□□□ 1.06
CHRNA4-203ENST00000467563 RPS12P25398 132 aaKnown RBP21.65■■□□□ 1.06
CHRNA4-203ENST00000467563 ZNF280AP59817 542 aaPredicted RBP21.65■■□□□ 1.06
CHRNA4-203ENST00000467563 SF3A1Q15459 793 aaKnown RBP21.65■■□□□ 1.06
CHRNA4-203ENST00000467563 SPZ1Q9BXG8 430 aa21.65■■□□□ 1.06
CHRNA4-203ENST00000467563 ISY1Q9ULR0 285 aaKnown RBP21.65■■□□□ 1.06
CHRNA4-203ENST00000467563 PCDHA7Q9UN72 937 aa21.65■■□□□ 1.06
CHRNA4-203ENST00000467563 SRCAPQ6ZRS2 3230 aa21.65■■□□□ 1.06
CHRNA4-203ENST00000467563 GDF11O95390 407 aa21.64■■□□□ 1.05
CHRNA4-203ENST00000467563 KRT2P35908 639 aa21.64■■□□□ 1.05
CHRNA4-203ENST00000467563 TOB1P50616 345 aaPredicted RBP21.64■■□□□ 1.05
CHRNA4-203ENST00000467563 ATP2B2Q01814 1243 aa21.64■■□□□ 1.05
CHRNA4-203ENST00000467563 RRP1BQ14684 758 aaKnown RBP21.64■■□□□ 1.05
CHRNA4-203ENST00000467563 KCNG4Q8TDN1 519 aa21.64■■□□□ 1.05
CHRNA4-203ENST00000467563 GPKOWQ92917 476 aaPredicted RBP eCLIP21.64■■□□□ 1.05
CHRNA4-203ENST00000467563 FHDC1Q9C0D6 1143 aaPredicted RBP21.64■■□□□ 1.05
CHRNA4-203ENST00000467563 SPTLC2O15270 562 aa21.64■■□□□ 1.05
CHRNA4-203ENST00000467563 GMPSP49915 693 aaPredicted RBP21.64■■□□□ 1.05
CHRNA4-203ENST00000467563 JAG1P78504 1218 aa21.64■■□□□ 1.05
CHRNA4-203ENST00000467563 CDAN1Q8IWY9 1227 aa21.64■■□□□ 1.05
CHRNA4-203ENST00000467563 TMEM39BQ9GZU3 492 aa21.64■■□□□ 1.05
CHRNA4-203ENST00000467563 FRMPD2Q68DX3 1309 aaPredicted RBP21.63■■□□□ 1.05
CHRNA4-203ENST00000467563 MYO1BO43795 1136 aa21.63■■□□□ 1.05
CHRNA4-203ENST00000467563 SEPT2Q15019 361 aa21.63■■□□□ 1.05
CHRNA4-203ENST00000467563 SLC39A14Q15043 492 aa21.63■■□□□ 1.05
CHRNA4-203ENST00000467563 PTPAQ15257 358 aa21.63■■□□□ 1.05
CHRNA4-203ENST00000467563 LRSAM1Q6UWE0 723 aa21.63■■□□□ 1.05
CHRNA4-203ENST00000467563 KANSL2Q9H9L4 492 aa21.63■■□□□ 1.05
CHRNA4-203ENST00000467563 DACT1Q9NYF0 836 aa21.63■■□□□ 1.05
CHRNA4-203ENST00000467563 HERC5Q9UII4 1024 aaKnown RBP21.63■■□□□ 1.05
CHRNA4-203ENST00000467563 NR1I2O75469 434 aa21.62■■□□□ 1.05
CHRNA4-203ENST00000467563 EEF2P13639 858 aaKnown RBP21.62■■□□□ 1.05
CHRNA4-203ENST00000467563 ABCB5Q2M3G0 1257 aa21.62■■□□□ 1.05
CHRNA4-203ENST00000467563 EARS2Q5JPH6 523 aaKnown RBP21.62■■□□□ 1.05
CHRNA4-203ENST00000467563 TYW1BQ6NUM6 668 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms